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The map label for this gene is 54293976

Identifier: 54293976

GI number: 54293976

Start: 1163918

End: 1164739

Strand: Reverse

Name: 54293976

Synonym: lpl1033

Alternate gene names: NA

Gene position: 1164739-1163918 (Counterclockwise)

Preceding gene: 54293977

Following gene: 54293975

Centisome position: 34.81

GC content: 42.09

Gene sequence:

>822_bases
ATGAATAAATTGTCTGCCATCGCTCTAAGCCTGTTATTAGGCCAGCAAGCAATCGCGGGTTTGTATATCCCTGGCATTGC
CACCTCGCCCATACAGCAAGCCAACAATGCCCTAGCAAAAGCAGGTCTTGCAGAATTTCATGATGAAGTCATCGAGGAAA
AGGATTTCCAACTTAATGATGATCAAAAGCAAGAAGCGAAAGTCTGGGGATTGAATGAAAAGGAAGAAAAACGCTATCTG
CAATTAATGCAAAGTAGAAGCGGTGTGTATTATAAAGACTTGCGCATGACACCTATTGATATTCTTGGACTTAACGCCAG
AGATGATGCGGAACGTGAACATTTTGCAAACCTTGCTGCTCGCCAGGAAGCACAAAAAGTGGCGCAAAATATCGCTTGGA
ACAATGCTTTTTATAAGGCCTATAACGAACTATTTAAAGACGTACCCGTGGTTGGCGATTTTGATCCCTCCCCTTACTCA
CCCTATGCTCATCAACCTATTCAATTAAAAGAGGGTGAAACACTCTATTTATTTATAAAACCTGACGATGCGGTTACCAC
CATTGTACTGCAACTGATTGACGCGATTAACCGCACTCCCAATACAAAACTTAACCTGCTGTTTCTGGATATGAACAATA
ACGCCATACAACTGTGGGCGAATCGACATCAAATCCCCATTCAATTAGTGACCAATCAGCAAATCACGCTAACCCCTGGC
AACCAACAATTTGAAGGCTTAGCACTTGCCAAGAAACAAACCCCATTACTGTTAATAGCCAATGGTAAAACCTCGCAAGT
TGTCGATTTAGGAAGATTTTAA

Upstream 100 bases:

>100_bases
TGGAAAATCCTAGATATCAATTTTGCCAAGCAAACTATCGAATTTGAGAACGCAGATAAAGCCCATGTCCTGATCCATTT
GACCCAACAAGAGGTGAACA

Downstream 100 bases:

>100_bases
TGATTAGGATTCTACTTTTACTGTCGGTCGCGTTGAATGTTCATAGCATGAACGTCATTCCTTTAACCCTGTCACAAAGT
GATACGTCATTAAAATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNKLSAIALSLLLGQQAIAGLYIPGIATSPIQQANNALAKAGLAEFHDEVIEEKDFQLNDDQKQEAKVWGLNEKEEKRYL
QLMQSRSGVYYKDLRMTPIDILGLNARDDAEREHFANLAARQEAQKVAQNIAWNNAFYKAYNELFKDVPVVGDFDPSPYS
PYAHQPIQLKEGETLYLFIKPDDAVTTIVLQLIDAINRTPNTKLNLLFLDMNNNAIQLWANRHQIPIQLVTNQQITLTPG
NQQFEGLALAKKQTPLLLIANGKTSQVVDLGRF

Sequences:

>Translated_273_residues
MNKLSAIALSLLLGQQAIAGLYIPGIATSPIQQANNALAKAGLAEFHDEVIEEKDFQLNDDQKQEAKVWGLNEKEEKRYL
QLMQSRSGVYYKDLRMTPIDILGLNARDDAEREHFANLAARQEAQKVAQNIAWNNAFYKAYNELFKDVPVVGDFDPSPYS
PYAHQPIQLKEGETLYLFIKPDDAVTTIVLQLIDAINRTPNTKLNLLFLDMNNNAIQLWANRHQIPIQLVTNQQITLTPG
NQQFEGLALAKKQTPLLLIANGKTSQVVDLGRF
>Mature_273_residues
MNKLSAIALSLLLGQQAIAGLYIPGIATSPIQQANNALAKAGLAEFHDEVIEEKDFQLNDDQKQEAKVWGLNEKEEKRYL
QLMQSRSGVYYKDLRMTPIDILGLNARDDAEREHFANLAARQEAQKVAQNIAWNNAFYKAYNELFKDVPVVGDFDPSPYS
PYAHQPIQLKEGETLYLFIKPDDAVTTIVLQLIDAINRTPNTKLNLLFLDMNNNAIQLWANRHQIPIQLVTNQQITLTPG
NQQFEGLALAKKQTPLLLIANGKTSQVVDLGRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30700; Mature: 30700

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLSAIALSLLLGQQAIAGLYIPGIATSPIQQANNALAKAGLAEFHDEVIEEKDFQLND
CCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DQKQEAKVWGLNEKEEKRYLQLMQSRSGVYYKDLRMTPIDILGLNARDDAEREHFANLAA
CCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHH
RQEAQKVAQNIAWNNAFYKAYNELFKDVPVVGDFDPSPYSPYAHQPIQLKEGETLYLFIK
HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEC
PDDAVTTIVLQLIDAINRTPNTKLNLLFLDMNNNAIQLWANRHQIPIQLVTNQQITLTPG
CCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCEEEECCC
NQQFEGLALAKKQTPLLLIANGKTSQVVDLGRF
CCCCCCEEEECCCCCEEEEECCCCCEEEECCCC
>Mature Secondary Structure
MNKLSAIALSLLLGQQAIAGLYIPGIATSPIQQANNALAKAGLAEFHDEVIEEKDFQLND
CCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DQKQEAKVWGLNEKEEKRYLQLMQSRSGVYYKDLRMTPIDILGLNARDDAEREHFANLAA
CCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHH
RQEAQKVAQNIAWNNAFYKAYNELFKDVPVVGDFDPSPYSPYAHQPIQLKEGETLYLFIK
HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEC
PDDAVTTIVLQLIDAINRTPNTKLNLLFLDMNNNAIQLWANRHQIPIQLVTNQQITLTPG
CCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCEEEECCC
NQQFEGLALAKKQTPLLLIANGKTSQVVDLGRF
CCCCCCEEEECCCCCEEEEECCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA