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The map label for this gene is 54293975

Identifier: 54293975

GI number: 54293975

Start: 1163487

End: 1163918

Strand: Reverse

Name: 54293975

Synonym: lpl1032

Alternate gene names: NA

Gene position: 1163918-1163487 (Counterclockwise)

Preceding gene: 54293976

Following gene: 54293974

Centisome position: 34.79

GC content: 40.51

Gene sequence:

>432_bases
ATGATTAGGATTCTACTTTTACTGTCGGTCGCGTTGAATGTTCATAGCATGAACGTCATTCCTTTAACCCTGTCACAAAG
TGATACGTCATTAAAATTAAATTTGTCCAGCCCAATAGGCGTACCAGCCAAAAGCAAAGCCACCGCAGGCAAAGTCAGCC
GCAAAACATTGGATACCACTTTATTAAACATACCTTTGTTTGTCATAGGTGCAGATAAAGCATCGATTCAATGGTTGGAA
CAGCATCAAGAAGAATTAAAATTCATGCAAGCCACAGGATTCATTACCAACGTCAATGACTTTGAAACCATTGTCGCTTT
GCAAGAAAAATTCAAACTACCGTTACTGCCTGTCAATGTTGACCCATTGCTTGCATACCTTCATGAACAACATTACCCCT
TAATCATTGCTGAGGGGGCTGTATGGCAGTAA

Upstream 100 bases:

>100_bases
ACCAACAATTTGAAGGCTTAGCACTTGCCAAGAAACAAACCCCATTACTGTTAATAGCCAATGGTAAAACCTCGCAAGTT
GTCGATTTAGGAAGATTTTA

Downstream 100 bases:

>100_bases
AGCAATATTCAAGGCAACTGACCATGCAATTAACCATAGTGCTATTCTTAGGTTGGTTAGCAATTATTATCTGGGCATTG
AGCCAATGGATGCTGCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MIRILLLLSVALNVHSMNVIPLTLSQSDTSLKLNLSSPIGVPAKSKATAGKVSRKTLDTTLLNIPLFVIGADKASIQWLE
QHQEELKFMQATGFITNVNDFETIVALQEKFKLPLLPVNVDPLLAYLHEQHYPLIIAEGAVWQ

Sequences:

>Translated_143_residues
MIRILLLLSVALNVHSMNVIPLTLSQSDTSLKLNLSSPIGVPAKSKATAGKVSRKTLDTTLLNIPLFVIGADKASIQWLE
QHQEELKFMQATGFITNVNDFETIVALQEKFKLPLLPVNVDPLLAYLHEQHYPLIIAEGAVWQ
>Mature_143_residues
MIRILLLLSVALNVHSMNVIPLTLSQSDTSLKLNLSSPIGVPAKSKATAGKVSRKTLDTTLLNIPLFVIGADKASIQWLE
QHQEELKFMQATGFITNVNDFETIVALQEKFKLPLLPVNVDPLLAYLHEQHYPLIIAEGAVWQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15840; Mature: 15840

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRILLLLSVALNVHSMNVIPLTLSQSDTSLKLNLSSPIGVPAKSKATAGKVSRKTLDTT
CCHHHEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
LLNIPLFVIGADKASIQWLEQHQEELKFMQATGFITNVNDFETIVALQEKFKLPLLPVNV
EEECEEEEEECCHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCCEEECCH
DPLLAYLHEQHYPLIIAEGAVWQ
HHHHHHHHCCCCCEEEECCCCCC
>Mature Secondary Structure
MIRILLLLSVALNVHSMNVIPLTLSQSDTSLKLNLSSPIGVPAKSKATAGKVSRKTLDTT
CCHHHEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
LLNIPLFVIGADKASIQWLEQHQEELKFMQATGFITNVNDFETIVALQEKFKLPLLPVNV
EEECEEEEEECCHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCCEEECCH
DPLLAYLHEQHYPLIIAEGAVWQ
HHHHHHHHCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA