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The map label for this gene is etfB [H]

Identifier: 54293897

GI number: 54293897

Start: 1065600

End: 1066349

Strand: Direct

Name: etfB [H]

Synonym: lpl0953

Alternate gene names: 54293897

Gene position: 1065600-1066349 (Clockwise)

Preceding gene: 54293896

Following gene: 54293898

Centisome position: 31.85

GC content: 39.73

Gene sequence:

>750_bases
ATGAAAATACTCGTGGCTGTAAAACGTGTGATTGACCCTTATGTCAAAATTCGAGTGAAATCGGATAATTCAGGAGTTGA
AACTCAAAATATCAAAATGGCAATGAATCCATTTGATGAAATAGCCATTGAAGAGGCATTGCGTTTGCGAGAAAAAAATT
GGGCAACGGAAGTTATTGCTGTAAGCATTGGTTCGGATAGCTCTCAGGAAACTTTAAGGCACGCTTTAGCTTTGGGTGCA
GATAAGGCCATTCTGGTTCGAACAGAAAAATCATTCGAGAGCCTTAATATAGCCAAGATATTAAATAGTATCGTAGCTAA
TGAAAAACCGGATTTGGTTTTGATGGGCAAACAATCGATAGATGGTGACAATAACCAAACCCCTCAAATGTTGGCTGCAT
TATTAAATTGGCCACAGGCTACCAATGCGTCGAAGATCATTCCCGATAATAATAATCTTGAAGTGGTGAGAGAAATTGAT
GGTGGTTTGGAAACACTCAAGGTACAGCTGCCTGCAGTAATCAGTACCGATCTTCGTTTAAATGAGCCCAGATATGCCAG
CTTGCCGAATATTATGAAGGCCAAACGAAAGCCTCTTGATATCATTGATCTGGATTCGCTTGGCTTATCTCTTAAACAAC
ATGTTGAAATATTAAAGGTTAATGCCCCGGCAACGAGAAGTGCTGGTGTCATACTTGATTCTGTGGCTGCATTGTTGGAT
AAATTACAACATGAAGCCAAAGTGCTTTAA

Upstream 100 bases:

>100_bases
AGAATAAATTAGCTTTATGTTCTAATTAAAATCAACCCCTTGAATTTATACCCCTATCTCTGGCAAGATGCAGACTGATT
TGATATTCCAGTGAGGAACC

Downstream 100 bases:

>100_bases
TTAAGGAGATGAGATGAGCACTTTAGTTTTAGTTGAACATAATAATCAGCAGTTACATCCAGCAACCCGCAATACACTGT
CTGCTGCTTTAGAGCTCGGT

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVAVKRVIDPYVKIRVKSDNSGVETQNIKMAMNPFDEIAIEEALRLREKNWATEVIAVSIGSDSSQETLRHALALGA
DKAILVRTEKSFESLNIAKILNSIVANEKPDLVLMGKQSIDGDNNQTPQMLAALLNWPQATNASKIIPDNNNLEVVREID
GGLETLKVQLPAVISTDLRLNEPRYASLPNIMKAKRKPLDIIDLDSLGLSLKQHVEILKVNAPATRSAGVILDSVAALLD
KLQHEAKVL

Sequences:

>Translated_249_residues
MKILVAVKRVIDPYVKIRVKSDNSGVETQNIKMAMNPFDEIAIEEALRLREKNWATEVIAVSIGSDSSQETLRHALALGA
DKAILVRTEKSFESLNIAKILNSIVANEKPDLVLMGKQSIDGDNNQTPQMLAALLNWPQATNASKIIPDNNNLEVVREID
GGLETLKVQLPAVISTDLRLNEPRYASLPNIMKAKRKPLDIIDLDSLGLSLKQHVEILKVNAPATRSAGVILDSVAALLD
KLQHEAKVL
>Mature_249_residues
MKILVAVKRVIDPYVKIRVKSDNSGVETQNIKMAMNPFDEIAIEEALRLREKNWATEVIAVSIGSDSSQETLRHALALGA
DKAILVRTEKSFESLNIAKILNSIVANEKPDLVLMGKQSIDGDNNQTPQMLAALLNWPQATNASKIIPDNNNLEVVREID
GGLETLKVQLPAVISTDLRLNEPRYASLPNIMKAKRKPLDIIDLDSLGLSLKQHVEILKVNAPATRSAGVILDSVAALLD
KLQHEAKVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=51.1904761904762, Blast_Score=256, Evalue=1e-68,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=49.789029535865, Blast_Score=234, Evalue=4e-62,
Organism=Escherichia coli, GI87082158, Length=120, Percent_Identity=31.6666666666667, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081682, Length=231, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=53.7549407114625, Blast_Score=257, Evalue=4e-69,
Organism=Saccharomyces cerevisiae, GI6321646, Length=251, Percent_Identity=48.605577689243, Blast_Score=225, Evalue=6e-60,
Organism=Drosophila melanogaster, GI24651147, Length=251, Percent_Identity=50.996015936255, Blast_Score=241, Evalue=5e-64,
Organism=Drosophila melanogaster, GI24651145, Length=251, Percent_Identity=50.996015936255, Blast_Score=241, Evalue=5e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27334; Mature: 27334

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVAVKRVIDPYVKIRVKSDNSGVETQNIKMAMNPFDEIAIEEALRLREKNWATEVIA
CHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEE
VSIGSDSSQETLRHALALGADKAILVRTEKSFESLNIAKILNSIVANEKPDLVLMGKQSI
EEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC
DGDNNQTPQMLAALLNWPQATNASKIIPDNNNLEVVREIDGGLETLKVQLPAVISTDLRL
CCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEEECEEEECCCEE
NEPRYASLPNIMKAKRKPLDIIDLDSLGLSLKQHVEILKVNAPATRSAGVILDSVAALLD
CCCCCCCCCHHHHHCCCCCCEEECHHHCCCHHHCEEEEEECCCCCCCCHHHHHHHHHHHH
KLQHEAKVL
HHHHHHCCC
>Mature Secondary Structure
MKILVAVKRVIDPYVKIRVKSDNSGVETQNIKMAMNPFDEIAIEEALRLREKNWATEVIA
CHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEE
VSIGSDSSQETLRHALALGADKAILVRTEKSFESLNIAKILNSIVANEKPDLVLMGKQSI
EEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCC
DGDNNQTPQMLAALLNWPQATNASKIIPDNNNLEVVREIDGGLETLKVQLPAVISTDLRL
CCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEEECEEEECCCEE
NEPRYASLPNIMKAKRKPLDIIDLDSLGLSLKQHVEILKVNAPATRSAGVILDSVAALLD
CCCCCCCCCHHHHHCCCCCCEEECHHHCCCHHHCEEEEEECCCCCCCCHHHHHHHHHHHH
KLQHEAKVL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]