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The map label for this gene is 54293827

Identifier: 54293827

GI number: 54293827

Start: 997243

End: 997836

Strand: Direct

Name: 54293827

Synonym: lpl0883

Alternate gene names: NA

Gene position: 997243-997836 (Clockwise)

Preceding gene: 54293823

Following gene: 54293828

Centisome position: 29.81

GC content: 38.38

Gene sequence:

>594_bases
ATGAGCAATTTTAGAAATTTCCTGGTTTTTATACTTTTATTTTTTTCTTTTTGCGGTCAGTTAACAGCTTCAAGTAAGCA
GAATTTGGCATTTAGAAATTTTTGGCATCCTACTTATTTAGGGCAACGACTTGATTACTGTACTTTAGATGGGAAAGAGT
GCGGAAAGGAGGTAGCGAATCGTTATTGCCAAATGCTGGGTTATGATTACTCCACTCAAAATGTCATTGCCTATAACGTC
GGTTTAACTAATTACTTGGGTAGCAAGGCTCAATGCAAAGGATGGCGTTGTAATGGTTTTATGACAATAGCTTGTGCTAT
TGGTTTATCACATACTCCTCCCAAACCTTACCATTATCGAGAGAAAAAATTTGCCGTACCCCGTTATAATGATTACCGAG
TGGATTGGTGTATGGAGCGCAATAAAGGCTGTGGTAAACAAGCCGCTAATTCGTTCTGTAATCGTATGGGATATATGCAA
GCCAAGGATTTCGTGAAGCAGGCTCAAGTGAGTGCTACGAAGACCATAGGAAGTCAGGAGTTATGTTTTGGTAATCAGTG
TAATGCGTTTAAGATGATTATTTGTTACAGATAA

Upstream 100 bases:

>100_bases
AAAGTTCATTACAGTACGAGTAAAAGAAGAATAAATCTCTCTTGTGCCTCCCAGTCATCCTAAGCTAACATGTGCTAATA
CTTGGTGATGGATTGTTATA

Downstream 100 bases:

>100_bases
ATCAAACACTTAGTCTGGTGATGACTATGACTTTTTAATTAGTGTCAGGATAGGTTAGTATTTTTTTAATTATAGCGATA
CGGCCTAATTTGATGGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSNFRNFLVFILLFFSFCGQLTASSKQNLAFRNFWHPTYLGQRLDYCTLDGKECGKEVANRYCQMLGYDYSTQNVIAYNV
GLTNYLGSKAQCKGWRCNGFMTIACAIGLSHTPPKPYHYREKKFAVPRYNDYRVDWCMERNKGCGKQAANSFCNRMGYMQ
AKDFVKQAQVSATKTIGSQELCFGNQCNAFKMIICYR

Sequences:

>Translated_197_residues
MSNFRNFLVFILLFFSFCGQLTASSKQNLAFRNFWHPTYLGQRLDYCTLDGKECGKEVANRYCQMLGYDYSTQNVIAYNV
GLTNYLGSKAQCKGWRCNGFMTIACAIGLSHTPPKPYHYREKKFAVPRYNDYRVDWCMERNKGCGKQAANSFCNRMGYMQ
AKDFVKQAQVSATKTIGSQELCFGNQCNAFKMIICYR
>Mature_196_residues
SNFRNFLVFILLFFSFCGQLTASSKQNLAFRNFWHPTYLGQRLDYCTLDGKECGKEVANRYCQMLGYDYSTQNVIAYNVG
LTNYLGSKAQCKGWRCNGFMTIACAIGLSHTPPKPYHYREKKFAVPRYNDYRVDWCMERNKGCGKQAANSFCNRMGYMQA
KDFVKQAQVSATKTIGSQELCFGNQCNAFKMIICYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22700; Mature: 22569

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFRNFLVFILLFFSFCGQLTASSKQNLAFRNFWHPTYLGQRLDYCTLDGKECGKEVAN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCCEEECCHHHHHHHHHH
RYCQMLGYDYSTQNVIAYNVGLTNYLGSKAQCKGWRCNGFMTIACAIGLSHTPPKPYHYR
HHHHHHCCCCCCCCEEEEECCHHHHHCCCCCCCCEECCCEEEEEEEECCCCCCCCCCCCC
EKKFAVPRYNDYRVDWCMERNKGCGKQAANSFCNRMGYMQAKDFVKQAQVSATKTIGSQE
CCEECCCCCCCCEEHEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
LCFGNQCNAFKMIICYR
CCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
SNFRNFLVFILLFFSFCGQLTASSKQNLAFRNFWHPTYLGQRLDYCTLDGKECGKEVAN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCCEEECCHHHHHHHHHH
RYCQMLGYDYSTQNVIAYNVGLTNYLGSKAQCKGWRCNGFMTIACAIGLSHTPPKPYHYR
HHHHHHCCCCCCCCEEEEECCHHHHHCCCCCCCCEECCCEEEEEEEECCCCCCCCCCCCC
EKKFAVPRYNDYRVDWCMERNKGCGKQAANSFCNRMGYMQAKDFVKQAQVSATKTIGSQE
CCEECCCCCCCCEEHEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
LCFGNQCNAFKMIICYR
CCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA