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The map label for this gene is fleQ [H]

Identifier: 54293828

GI number: 54293828

Start: 998032

End: 999447

Strand: Direct

Name: fleQ [H]

Synonym: lpl0884

Alternate gene names: 54293828

Gene position: 998032-999447 (Clockwise)

Preceding gene: 54293827

Following gene: 54293831

Centisome position: 29.83

GC content: 38.91

Gene sequence:

>1416_bases
ATGAGGAGCAATGACAGGATTTATATTATCGATGATGATAAGGAACGTTGTGACAAGCTTCGGACTATTTTTGATTTTAT
AGGCCAATTCTCTGAGATCACTCAATATGGCAATTGGCAATTGAGTGTTAATCCTAATCCAAGTGTGATAGTTATTGGAG
CGTGTGCTTCTTTTGAAAAAATGATGGATGAATTGGATACATTAGTTAAAAGGTTTCCAAAAACTCCAATATTGGTGATT
GATGCTGTGCTTTCTACATCTGAATGCGCGGATCGAAATATTGTTGATTGTTTATCATTTCCATTCAGCTATGCAAAAAT
GCTTAAATCTCTCCATAGGTGTCAAATAGCGAAAGAAGCAGTTAAATTTATCACGGCAGGTACCCATAAGACTCCTTTAT
TTAGAAGCTTGGTTGGGAATAGTGAAGGTATTCGTCAAGTACGCAAACTGATTGAGCAAGTAGCTGATACTGAGGCCAGT
GTGTTGATTTTGGGTGAGTCAGGTACGGGTAAGGAAGTCGTTGCTCGCAATATACATTCTCTTTCATCCCGAGCAAATAA
ACCATTTGTCCCTATCAATTGTGGAGCAATCCCGGGGGAATTATTGGAGAGTGAATTATTTGGTCATGAAAAAGGTGCAT
TTACAGGAGCGATTACATCAAGGCAAGGACGTTTTGAGTTGGCCAATGGAGGAACTCTATTCCTGGATGAAATAGGAGAT
ATGCCATTAGCTATGCAGGTTAAGTTATTAAGAGTTTTACAAGAACGTTGTTTTGAAAGAGTAGGTTCAAATAAAAGCAT
CGAAGTCAATGTTCGTATCATTGCTGCTACACATAGAAATTTAGAAATTGCTATTCAAGAAGGGAAATTTAGAGAAGATT
TGTTTTACAGATTGAATGTATTTCCCATTGAAATGCCTCCACTACGTAATAGAAGTAGCGATTTATCATTGCTTTTTAAT
GAGCTGGTTTCTCGAATTGAAGGGGAGGGCAGACCTACCGTTCGATTAATGCCCGATGCTATGGATGCTTTATGCGAATA
CAGCTGGCCAGGTAACGTGAGGGAGTTAGCTAATTTGGTGGAGAGATTATCTATTCTTTACCCTAATGGTATTATTGGCA
AGAGTGATTTACCTCATCGCTTTCAAGGTAAATATAAACCATCTTGTCCAGAGGCATCGGGGGCGGAACGTGAAACTTTG
TTGCAAATAATAAAGCAGGAGTCAATAGCTAATGCAGAAGGCATTGATTTAAAAGAACATTTAGTCAAGACAGAACTTGC
CTTGATTAGCCAGGCCTTGGATGAGTCAGATTGGGTTGTTGCTCATGCAGCCAGTTATCTCAACATGAGAAGGACAACTT
TAGTTGAAAAAATGCGTAAATATGGCTTAACTCGACCAGAAAGAATGGAGCGATAG

Upstream 100 bases:

>100_bases
GATTTTATGACGATTAAAATAAATTGTGACAATTATTTGACAGTTATTCATTATGTGTCCGATACTTTAAATTAAATGAC
TCAAACTTAAGGATAGGTTT

Downstream 100 bases:

>100_bases
ATACACAACTCACCTCATATTACTTATTCTTTAGCACAGGATTATTTCTCTTTTTCCTGTGTTTCTTCTGTATTTGATTC
AGGTTTGCTTTCTGCTTTTG

Product: transcriptional regulator FleQ

Products: NA

Alternate protein names: Ornithine decarboxylase antizyme; Ornithine/arginine decarboxylase inhibitor [H]

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MRSNDRIYIIDDDKERCDKLRTIFDFIGQFSEITQYGNWQLSVNPNPSVIVIGACASFEKMMDELDTLVKRFPKTPILVI
DAVLSTSECADRNIVDCLSFPFSYAKMLKSLHRCQIAKEAVKFITAGTHKTPLFRSLVGNSEGIRQVRKLIEQVADTEAS
VLILGESGTGKEVVARNIHSLSSRANKPFVPINCGAIPGELLESELFGHEKGAFTGAITSRQGRFELANGGTLFLDEIGD
MPLAMQVKLLRVLQERCFERVGSNKSIEVNVRIIAATHRNLEIAIQEGKFREDLFYRLNVFPIEMPPLRNRSSDLSLLFN
ELVSRIEGEGRPTVRLMPDAMDALCEYSWPGNVRELANLVERLSILYPNGIIGKSDLPHRFQGKYKPSCPEASGAERETL
LQIIKQESIANAEGIDLKEHLVKTELALISQALDESDWVVAHAASYLNMRRTTLVEKMRKYGLTRPERMER

Sequences:

>Translated_471_residues
MRSNDRIYIIDDDKERCDKLRTIFDFIGQFSEITQYGNWQLSVNPNPSVIVIGACASFEKMMDELDTLVKRFPKTPILVI
DAVLSTSECADRNIVDCLSFPFSYAKMLKSLHRCQIAKEAVKFITAGTHKTPLFRSLVGNSEGIRQVRKLIEQVADTEAS
VLILGESGTGKEVVARNIHSLSSRANKPFVPINCGAIPGELLESELFGHEKGAFTGAITSRQGRFELANGGTLFLDEIGD
MPLAMQVKLLRVLQERCFERVGSNKSIEVNVRIIAATHRNLEIAIQEGKFREDLFYRLNVFPIEMPPLRNRSSDLSLLFN
ELVSRIEGEGRPTVRLMPDAMDALCEYSWPGNVRELANLVERLSILYPNGIIGKSDLPHRFQGKYKPSCPEASGAERETL
LQIIKQESIANAEGIDLKEHLVKTELALISQALDESDWVVAHAASYLNMRRTTLVEKMRKYGLTRPERMER
>Mature_471_residues
MRSNDRIYIIDDDKERCDKLRTIFDFIGQFSEITQYGNWQLSVNPNPSVIVIGACASFEKMMDELDTLVKRFPKTPILVI
DAVLSTSECADRNIVDCLSFPFSYAKMLKSLHRCQIAKEAVKFITAGTHKTPLFRSLVGNSEGIRQVRKLIEQVADTEAS
VLILGESGTGKEVVARNIHSLSSRANKPFVPINCGAIPGELLESELFGHEKGAFTGAITSRQGRFELANGGTLFLDEIGD
MPLAMQVKLLRVLQERCFERVGSNKSIEVNVRIIAATHRNLEIAIQEGKFREDLFYRLNVFPIEMPPLRNRSSDLSLLFN
ELVSRIEGEGRPTVRLMPDAMDALCEYSWPGNVRELANLVERLSILYPNGIIGKSDLPHRFQGKYKPSCPEASGAERETL
LQIIKQESIANAEGIDLKEHLVKTELALISQALDESDWVVAHAASYLNMRRTTLVEKMRKYGLTRPERMER

Specific function: Member of the two-component regulatory system AtoS/AtoC involved in the transcriptional regulation of the ato genes for acetoacetate metabolism. Also an inhibitor of polyamine biosynthesis [H]

COG id: COG2204

COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=472, Percent_Identity=37.7118644067797, Blast_Score=293, Evalue=1e-80,
Organism=Escherichia coli, GI87082117, Length=332, Percent_Identity=46.3855421686747, Blast_Score=281, Evalue=6e-77,
Organism=Escherichia coli, GI1790437, Length=464, Percent_Identity=37.9310344827586, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1789087, Length=431, Percent_Identity=38.7470997679814, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1789233, Length=347, Percent_Identity=44.6685878962536, Blast_Score=261, Evalue=9e-71,
Organism=Escherichia coli, GI1790299, Length=407, Percent_Identity=38.8206388206388, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1788905, Length=240, Percent_Identity=52.9166666666667, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI87082152, Length=231, Percent_Identity=50.6493506493506, Blast_Score=228, Evalue=8e-61,
Organism=Escherichia coli, GI1786524, Length=244, Percent_Identity=46.7213114754098, Blast_Score=215, Evalue=6e-57,
Organism=Escherichia coli, GI87081872, Length=332, Percent_Identity=37.3493975903614, Blast_Score=201, Evalue=9e-53,
Organism=Escherichia coli, GI1787583, Length=230, Percent_Identity=43.4782608695652, Blast_Score=192, Evalue=5e-50,
Organism=Escherichia coli, GI1789828, Length=267, Percent_Identity=36.3295880149813, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI87081858, Length=324, Percent_Identity=29.9382716049383, Blast_Score=147, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011006
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 52990; Mature: 52990

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00675 SIGMA54_INTERACT_1 ; PS00676 SIGMA54_INTERACT_2 ; PS00688 SIGMA54_INTERACT_3 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSNDRIYIIDDDKERCDKLRTIFDFIGQFSEITQYGNWQLSVNPNPSVIVIGACASFEK
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHHH
MMDELDTLVKRFPKTPILVIDAVLSTSECADRNIVDCLSFPFSYAKMLKSLHRCQIAKEA
HHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
VKFITAGTHKTPLFRSLVGNSEGIRQVRKLIEQVADTEASVLILGESGTGKEVVARNIHS
HHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH
LSSRANKPFVPINCGAIPGELLESELFGHEKGAFTGAITSRQGRFELANGGTLFLDEIGD
HHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCEEEEECCCC
MPLAMQVKLLRVLQERCFERVGSNKSIEVNVRIIAATHRNLEIAIQEGKFREDLFYRLNV
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHEEEEE
FPIEMPPLRNRSSDLSLLFNELVSRIEGEGRPTVRLMPDAMDALCEYSWPGNVRELANLV
EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHH
ERLSILYPNGIIGKSDLPHRFQGKYKPSCPEASGAERETLLQIIKQESIANAEGIDLKEH
HHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
LVKTELALISQALDESDWVVAHAASYLNMRRTTLVEKMRKYGLTRPERMER
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure
MRSNDRIYIIDDDKERCDKLRTIFDFIGQFSEITQYGNWQLSVNPNPSVIVIGACASFEK
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHHH
MMDELDTLVKRFPKTPILVIDAVLSTSECADRNIVDCLSFPFSYAKMLKSLHRCQIAKEA
HHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
VKFITAGTHKTPLFRSLVGNSEGIRQVRKLIEQVADTEASVLILGESGTGKEVVARNIHS
HHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH
LSSRANKPFVPINCGAIPGELLESELFGHEKGAFTGAITSRQGRFELANGGTLFLDEIGD
HHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCEEEEECCCC
MPLAMQVKLLRVLQERCFERVGSNKSIEVNVRIIAATHRNLEIAIQEGKFREDLFYRLNV
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHEEEEE
FPIEMPPLRNRSSDLSLLFNELVSRIEGEGRPTVRLMPDAMDALCEYSWPGNVRELANLV
EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHH
ERLSILYPNGIIGKSDLPHRFQGKYKPSCPEASGAERETLLQIIKQESIANAEGIDLKEH
HHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
LVKTELALISQALDESDWVVAHAASYLNMRRTTLVEKMRKYGLTRPERMER
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 8346225 [H]