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The map label for this gene is epsN [H]

Identifier: 54293739

GI number: 54293739

Start: 898223

End: 899725

Strand: Direct

Name: epsN [H]

Synonym: lpl0792

Alternate gene names: 54293739

Gene position: 898223-899725 (Clockwise)

Preceding gene: 54293738

Following gene: 54293740

Centisome position: 26.85

GC content: 39.85

Gene sequence:

>1503_bases
ATGATTACTATCAAAGAATTATACATAAATAAACAAGAATGCCTGAAAACTGCCTTGAAGAAGCTGGATGCTACGGCTCA
AGGTGTGTTATTTCTGGTAGATAGTGATGAGTGTTTGATAAGAACGGTTACAGATGGTGACATTCGAAGATTACTATTAA
AAGGATTCACATTAGATTCTACTTTAGAGGAATTATCAGAGCATTCATCAAAAGCTTTACCCGTCTCTGCTACGATTCAG
GATGCCTACCATTTAATGCAGGAATATGAATTAGATCATATTCCCGTTATCGATGAGAGTAATCGCCCCATACGCTTGAT
CCACCGGAGAGAACTATCTTCCAATATTCTGCTTTCCTCGCCTCATATCGGTGAGCATGAGCAGCAATACGTACAGGAAG
CTTTTGCCACCAACTGGGTAGCCCCTTTAGGCCCCAATGTTGATTCTTTTGAAAAAGAAGTGGCGGAATACATTAACATA
AAATCAGCTGTAGCTTTAAGCTCAGGAACAGCTGCAATTCATCTGGCACTCGTATTACTCGATGTGAAACCAGGAGATAT
TGTCTTCGCATCCAGCTTTACTTTTGTAGCCACAGTGAACCCTATCTTATACCAAGGGGCGACTCCGGTATTTATTGATT
CTGATTTGGACACCTGGAATATGTCTCCGGTTGCTCTTGAGCGGGCATTAAGAGAAAGTAAAGCAAAAAATCAAATGCCA
AAAGCCGTGATTATTGTTAATTTATATGGACAAAGCGCTAATTATGACGCTTTATGCCAATTATGTAATGAATACAATGT
TCCAATTATAGAAGATGCGGCGGAGTCTTTGGGAGCTACCTATAACAACAAGTACAGCGGGACTTTCGGCAAGTTAGGCG
TGTTTTCATTTAATGGCAACAAAATCATTACCACGTCTGGTGGCGGCATGTTGGTGTCTGAAGACGAGAGTCTCATACAA
AGAGCAAGATTTTTATCAACTCAAGCTCGAGAACCAGTACCCCATTATGAGCATACTGTGGTTGGGTATAATTACAGGAT
GAGTAATGTGCTTGCCGGCATAGGCAGAGGGCAGCTGAAAGTATTGGAAAAACGGGTTAAGGCAAGACGAGCTATTTTTG
ATCGATATAAGCAAGCCTTGGAATCTTACCCATTTATTGACATGATGCCAGAGATAACCCAAGGATACAGTACTCGTTGG
TTATCGACATTAGTTATTAAACCAACGCCATACAAGATAAGACCGGAAGAAGTCATAGAGCAATTAAAGCCGTTTAAAAT
CGAAGCAAGAAGAACCTGGAAGCCTATGCATAGGCAGCCTTTGTTTGTAGGCTCTAAATACTACCCTCATGATGAACAAT
TCAGTGTTTCAGATTACTTGTTTGATCATGGTATTTGTCTTCCTTCCGGGTCAAATTTAACTTCCAGGGATATTGATAGA
GTCATTCATTGTTTGAATGATATTTTTATTAAATATAAGCAAAACAATTTTGAGGTAGCTTAA

Upstream 100 bases:

>100_bases
ATAGGTGATGGTGTAACAATTGGGGCTGGCTCAGTCGTTGTAAAGGATGTAAAAAAGAATACTGTTGTAAAAGGCGTACC
CGCAGTCTAAAAGGAATAAA

Downstream 100 bases:

>100_bases
TTATTTGTTCTAGTGAAAACTGGATACAGGTAGTAATAGATTTAAATATTAAGGAATTATAATTCTCTTTTAAGAGTTTT
AGTAACGATATGAATATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MITIKELYINKQECLKTALKKLDATAQGVLFLVDSDECLIRTVTDGDIRRLLLKGFTLDSTLEELSEHSSKALPVSATIQ
DAYHLMQEYELDHIPVIDESNRPIRLIHRRELSSNILLSSPHIGEHEQQYVQEAFATNWVAPLGPNVDSFEKEVAEYINI
KSAVALSSGTAAIHLALVLLDVKPGDIVFASSFTFVATVNPILYQGATPVFIDSDLDTWNMSPVALERALRESKAKNQMP
KAVIIVNLYGQSANYDALCQLCNEYNVPIIEDAAESLGATYNNKYSGTFGKLGVFSFNGNKIITTSGGGMLVSEDESLIQ
RARFLSTQAREPVPHYEHTVVGYNYRMSNVLAGIGRGQLKVLEKRVKARRAIFDRYKQALESYPFIDMMPEITQGYSTRW
LSTLVIKPTPYKIRPEEVIEQLKPFKIEARRTWKPMHRQPLFVGSKYYPHDEQFSVSDYLFDHGICLPSGSNLTSRDIDR
VIHCLNDIFIKYKQNNFEVA

Sequences:

>Translated_500_residues
MITIKELYINKQECLKTALKKLDATAQGVLFLVDSDECLIRTVTDGDIRRLLLKGFTLDSTLEELSEHSSKALPVSATIQ
DAYHLMQEYELDHIPVIDESNRPIRLIHRRELSSNILLSSPHIGEHEQQYVQEAFATNWVAPLGPNVDSFEKEVAEYINI
KSAVALSSGTAAIHLALVLLDVKPGDIVFASSFTFVATVNPILYQGATPVFIDSDLDTWNMSPVALERALRESKAKNQMP
KAVIIVNLYGQSANYDALCQLCNEYNVPIIEDAAESLGATYNNKYSGTFGKLGVFSFNGNKIITTSGGGMLVSEDESLIQ
RARFLSTQAREPVPHYEHTVVGYNYRMSNVLAGIGRGQLKVLEKRVKARRAIFDRYKQALESYPFIDMMPEITQGYSTRW
LSTLVIKPTPYKIRPEEVIEQLKPFKIEARRTWKPMHRQPLFVGSKYYPHDEQFSVSDYLFDHGICLPSGSNLTSRDIDR
VIHCLNDIFIKYKQNNFEVA
>Mature_500_residues
MITIKELYINKQECLKTALKKLDATAQGVLFLVDSDECLIRTVTDGDIRRLLLKGFTLDSTLEELSEHSSKALPVSATIQ
DAYHLMQEYELDHIPVIDESNRPIRLIHRRELSSNILLSSPHIGEHEQQYVQEAFATNWVAPLGPNVDSFEKEVAEYINI
KSAVALSSGTAAIHLALVLLDVKPGDIVFASSFTFVATVNPILYQGATPVFIDSDLDTWNMSPVALERALRESKAKNQMP
KAVIIVNLYGQSANYDALCQLCNEYNVPIIEDAAESLGATYNNKYSGTFGKLGVFSFNGNKIITTSGGGMLVSEDESLIQ
RARFLSTQAREPVPHYEHTVVGYNYRMSNVLAGIGRGQLKVLEKRVKARRAIFDRYKQALESYPFIDMMPEITQGYSTRW
LSTLVIKPTPYKIRPEEVIEQLKPFKIEARRTWKPMHRQPLFVGSKYYPHDEQFSVSDYLFDHGICLPSGSNLTSRDIDR
VIHCLNDIFIKYKQNNFEVA

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=394, Percent_Identity=29.6954314720812, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI2367285, Length=273, Percent_Identity=28.2051282051282, Blast_Score=118, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR002129
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 56453; Mature: 56453

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIKELYINKQECLKTALKKLDATAQGVLFLVDSDECLIRTVTDGDIRRLLLKGFTLDS
CEEEHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHCCCCHH
TLEELSEHSSKALPVSATIQDAYHLMQEYELDHIPVIDESNRPIRLIHRRELSSNILLSS
HHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEHHHCCCCEEEEC
PHIGEHEQQYVQEAFATNWVAPLGPNVDSFEKEVAEYINIKSAVALSSGTAAIHLALVLL
CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHEEECCCCHHEEEEEEEE
DVKPGDIVFASSFTFVATVNPILYQGATPVFIDSDLDTWNMSPVALERALRESKAKNQMP
ECCCCCEEEECCEEEEEECCHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
KAVIIVNLYGQSANYDALCQLCNEYNVPIIEDAAESLGATYNNKYSGTFGKLGVFSFNGN
CEEEEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
KIITTSGGGMLVSEDESLIQRARFLSTQAREPVPHYEHTVVGYNYRMSNVLAGIGRGQLK
EEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEHHHHHHHCCCHHHH
VLEKRVKARRAIFDRYKQALESYPFIDMMPEITQGYSTRWLSTLVIKPTPYKIRPEEVIE
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHCCCCCCEEEEEEECCCCCCCCHHHHHH
QLKPFKIEARRTWKPMHRQPLFVGSKYYPHDEQFSVSDYLFDHGICLPSGSNLTSRDIDR
HCCCCEEEHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCEECCCCCCCCHHHHHH
VIHCLNDIFIKYKQNNFEVA
HHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure
MITIKELYINKQECLKTALKKLDATAQGVLFLVDSDECLIRTVTDGDIRRLLLKGFTLDS
CEEEHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHCCCCHH
TLEELSEHSSKALPVSATIQDAYHLMQEYELDHIPVIDESNRPIRLIHRRELSSNILLSS
HHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEHHHCCCCEEEEC
PHIGEHEQQYVQEAFATNWVAPLGPNVDSFEKEVAEYINIKSAVALSSGTAAIHLALVLL
CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHEEECCCCHHEEEEEEEE
DVKPGDIVFASSFTFVATVNPILYQGATPVFIDSDLDTWNMSPVALERALRESKAKNQMP
ECCCCCEEEECCEEEEEECCHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
KAVIIVNLYGQSANYDALCQLCNEYNVPIIEDAAESLGATYNNKYSGTFGKLGVFSFNGN
CEEEEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
KIITTSGGGMLVSEDESLIQRARFLSTQAREPVPHYEHTVVGYNYRMSNVLAGIGRGQLK
EEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEHHHHHHHCCCHHHH
VLEKRVKARRAIFDRYKQALESYPFIDMMPEITQGYSTRWLSTLVIKPTPYKIRPEEVIE
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHCCCCCCEEEEEEECCCCCCCCHHHHHH
QLKPFKIEARRTWKPMHRQPLFVGSKYYPHDEQFSVSDYLFDHGICLPSGSNLTSRDIDR
HCCCCEEEHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCEECCCCCCCCHHHHHH
VIHCLNDIFIKYKQNNFEVA
HHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]