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The map label for this gene is yebA [C]

Identifier: 54293558

GI number: 54293558

Start: 656627

End: 658060

Strand: Reverse

Name: yebA [C]

Synonym: lpl0610

Alternate gene names: 54293558

Gene position: 658060-656627 (Counterclockwise)

Preceding gene: 54293561

Following gene: 54293555

Centisome position: 19.67

GC content: 37.31

Gene sequence:

>1434_bases
ATGGATAAAAGACCGAATATACCAAAAAGAAAATCTGGTAACTCATCAAAGCTATTAGCGTTTTTTGCGTTGGTATTTGC
CTTTTCGCTTCCGTATTTGCTAGTGAAAAATTTTTCACACCCTAAACGAAGCAGTTATGCTGACCAAACTGATTTATACC
CCGAACTATCAGACGAGTTATCGAGAGATATACCTGCTGAAGCTTCCACGGAAATTCCGCATGAAAAACCTGATATTAAA
TCTGCTACAAAACCTATGCAAACAAAGCAAGAACAGCAAGACAAACCAATCAATACAAGTCATGTAAAAAAAGATAATGA
ATGGCAAATAGTCAATCCTCATTCAGGAGATTCTATGGCGACCATTTTCCATAGGCTAGGACTAACTGCGCAAAATTTAA
ATGATGTGATAAAAAATAACCCACACGCCAAGATGCTTACTAGAATTAAACCCAACCAGAAATTACAATTTTTAATTAAA
AAAAATAAATTGGAAAGATTAATTGTCCCTGTAAACACCATTCAAACACTAACAGTTTATCGCGCAGGAAAAATATACAA
AACCAAAATTGATTCAAAAAAAACAACCACTCAAAATCGTTATGTGACTGCAACAGTCCAAGGTTCTTTGTATACAACAG
CCCAACGATTTAACATCCCCTCAAAATTAGTCCGTCAAATGACCACTATCTTTAACAAAGAAATTGATTTTTCCAAATCT
TTGCGCTCTGGAGATCAATTCTCGATAATTTATGATGCTTATTATATTGAAGATAAAATGGTTGGAGTAGGAGACATTCT
GGTAGTAACGTATACTAATCATGGAAAAACTTATCAAGCAATACGTCATACTAACGCTCATGGTGAGCAAGACTATTTTA
CCCCACAAGGCACCAGCTTTAAAAAAGCCTTCACTCGATATCCAATTAAATTTAGCCATATAAGCTCGACTTTTGCTTTA
TCGAGATACCACCCAATTCTTCATTACAAACGAGCACACAAAGGTATCGATTTGGCTGCCCCGATTGGAACACCGATACA
TGCTACCGGCGATGGGGTTATTACAATCATCGATAGGCATAATGGATATGGCAATATGATTAAAATTAAGCATGATAAAA
CATACAGCACTGTTTATGGGCATTTACTCAAATTCCAGAAAGGTCTATCAAAAGGCAGTAGAGTAAAACGAGGTCAAGTA
ATTGGTTATGTAGGACAAACCGGTCTGGCAACCGGACCTCATTGCCATTATGAGCTTCATGTCAATAATCAGCCAAGAAA
CCCAACTACAATAAGCTTGCCTACTGCAGCACCAGTACCAGCAAGAGAAATGGCGGCATTCAAAGCAAAAGCCAGTACAC
TTTTAGCCCGGCTAAAACTTTTCGAGCAAGCGCAATTAGCAAGTAAAGGGAAAAAGAAAGCTAGCGTTGGATAA

Upstream 100 bases:

>100_bases
AGTTGACTCAAGGTAGCGGTCACTTCCAAATAATGACTGTGATATATTGATTGAAATTTAAATAGCAGCATTTTTCAGAT
GACGGCAATATAGGCAAAAA

Downstream 100 bases:

>100_bases
AGACTGCGCGTGGGATTTTTCCAAACCCAAATACCTAATCTAAATGACAGCAGACACTTCTTTATAAAGCGACTAAGCTC
CCAAGTAATTCAAACATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MDKRPNIPKRKSGNSSKLLAFFALVFAFSLPYLLVKNFSHPKRSSYADQTDLYPELSDELSRDIPAEASTEIPHEKPDIK
SATKPMQTKQEQQDKPINTSHVKKDNEWQIVNPHSGDSMATIFHRLGLTAQNLNDVIKNNPHAKMLTRIKPNQKLQFLIK
KNKLERLIVPVNTIQTLTVYRAGKIYKTKIDSKKTTTQNRYVTATVQGSLYTTAQRFNIPSKLVRQMTTIFNKEIDFSKS
LRSGDQFSIIYDAYYIEDKMVGVGDILVVTYTNHGKTYQAIRHTNAHGEQDYFTPQGTSFKKAFTRYPIKFSHISSTFAL
SRYHPILHYKRAHKGIDLAAPIGTPIHATGDGVITIIDRHNGYGNMIKIKHDKTYSTVYGHLLKFQKGLSKGSRVKRGQV
IGYVGQTGLATGPHCHYELHVNNQPRNPTTISLPTAAPVPAREMAAFKAKASTLLARLKLFEQAQLASKGKKKASVG

Sequences:

>Translated_477_residues
MDKRPNIPKRKSGNSSKLLAFFALVFAFSLPYLLVKNFSHPKRSSYADQTDLYPELSDELSRDIPAEASTEIPHEKPDIK
SATKPMQTKQEQQDKPINTSHVKKDNEWQIVNPHSGDSMATIFHRLGLTAQNLNDVIKNNPHAKMLTRIKPNQKLQFLIK
KNKLERLIVPVNTIQTLTVYRAGKIYKTKIDSKKTTTQNRYVTATVQGSLYTTAQRFNIPSKLVRQMTTIFNKEIDFSKS
LRSGDQFSIIYDAYYIEDKMVGVGDILVVTYTNHGKTYQAIRHTNAHGEQDYFTPQGTSFKKAFTRYPIKFSHISSTFAL
SRYHPILHYKRAHKGIDLAAPIGTPIHATGDGVITIIDRHNGYGNMIKIKHDKTYSTVYGHLLKFQKGLSKGSRVKRGQV
IGYVGQTGLATGPHCHYELHVNNQPRNPTTISLPTAAPVPAREMAAFKAKASTLLARLKLFEQAQLASKGKKKASVG
>Mature_477_residues
MDKRPNIPKRKSGNSSKLLAFFALVFAFSLPYLLVKNFSHPKRSSYADQTDLYPELSDELSRDIPAEASTEIPHEKPDIK
SATKPMQTKQEQQDKPINTSHVKKDNEWQIVNPHSGDSMATIFHRLGLTAQNLNDVIKNNPHAKMLTRIKPNQKLQFLIK
KNKLERLIVPVNTIQTLTVYRAGKIYKTKIDSKKTTTQNRYVTATVQGSLYTTAQRFNIPSKLVRQMTTIFNKEIDFSKS
LRSGDQFSIIYDAYYIEDKMVGVGDILVVTYTNHGKTYQAIRHTNAHGEQDYFTPQGTSFKKAFTRYPIKFSHISSTFAL
SRYHPILHYKRAHKGIDLAAPIGTPIHATGDGVITIIDRHNGYGNMIKIKHDKTYSTVYGHLLKFQKGLSKGSRVKRGQV
IGYVGQTGLATGPHCHYELHVNNQPRNPTTISLPTAAPVPAREMAAFKAKASTLLARLKLFEQAQLASKGKKKASVG

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=349, Percent_Identity=30.0859598853868, Blast_Score=161, Evalue=7e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 53678; Mature: 53678

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRPNIPKRKSGNSSKLLAFFALVFAFSLPYLLVKNFSHPKRSSYADQTDLYPELSDEL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
SRDIPAEASTEIPHEKPDIKSATKPMQTKQEQQDKPINTSHVKKDNEWQIVNPHSGDSMA
HHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCCHHH
TIFHRLGLTAQNLNDVIKNNPHAKMLTRIKPNQKLQFLIKKNKLERLIVPVNTIQTLTVY
HHHHHHCCCHHHHHHHHHCCCCHHHHEECCCCCCEEEEEECCCCCEEEEECCHHEEEEEE
RAGKIYKTKIDSKKTTTQNRYVTATVQGSLYTTAQRFNIPSKLVRQMTTIFNKEIDFSKS
ECCCEEEEECCCCCCCCCCEEEEEEECCCEEEHHHHCCCHHHHHHHHHHHHCCCCCHHHH
LRSGDQFSIIYDAYYIEDKMVGVGDILVVTYTNHGKTYQAIRHTNAHGEQDYFTPQGTSF
HCCCCCEEEEEEEEEECCCEECCCCEEEEEEECCCCEEHHHHHCCCCCCCCCCCCCCCCH
KKAFTRYPIKFSHISSTFALSRYHPILHYKRAHKGIDLAAPIGTPIHATGDGVITIIDRH
HHHHHHCCEEEECCCHHHHHHHHCHHHHHHHHCCCCEEECCCCCCEEECCCCEEEEEECC
NGYGNMIKIKHDKTYSTVYGHLLKFQKGLSKGSRVKRGQVIGYVGQTGLATGPHCHYELH
CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE
VNNQPRNPTTISLPTAAPVPAREMAAFKAKASTLLARLKLFEQAQLASKGKKKASVG
ECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDKRPNIPKRKSGNSSKLLAFFALVFAFSLPYLLVKNFSHPKRSSYADQTDLYPELSDEL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
SRDIPAEASTEIPHEKPDIKSATKPMQTKQEQQDKPINTSHVKKDNEWQIVNPHSGDSMA
HHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCCHHH
TIFHRLGLTAQNLNDVIKNNPHAKMLTRIKPNQKLQFLIKKNKLERLIVPVNTIQTLTVY
HHHHHHCCCHHHHHHHHHCCCCHHHHEECCCCCCEEEEEECCCCCEEEEECCHHEEEEEE
RAGKIYKTKIDSKKTTTQNRYVTATVQGSLYTTAQRFNIPSKLVRQMTTIFNKEIDFSKS
ECCCEEEEECCCCCCCCCCEEEEEEECCCEEEHHHHCCCHHHHHHHHHHHHCCCCCHHHH
LRSGDQFSIIYDAYYIEDKMVGVGDILVVTYTNHGKTYQAIRHTNAHGEQDYFTPQGTSF
HCCCCCEEEEEEEEEECCCEECCCCEEEEEEECCCCEEHHHHHCCCCCCCCCCCCCCCCH
KKAFTRYPIKFSHISSTFALSRYHPILHYKRAHKGIDLAAPIGTPIHATGDGVITIIDRH
HHHHHHCCEEEECCCHHHHHHHHCHHHHHHHHCCCCEEECCCCCCEEECCCCEEEEEECC
NGYGNMIKIKHDKTYSTVYGHLLKFQKGLSKGSRVKRGQVIGYVGQTGLATGPHCHYELH
CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE
VNNQPRNPTTISLPTAAPVPAREMAAFKAKASTLLARLKLFEQAQLASKGKKKASVG
ECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]