Click here to switch to the map view.

The map label for this gene is 54293384

Identifier: 54293384

GI number: 54293384

Start: 480943

End: 481962

Strand: Reverse

Name: 54293384

Synonym: lpl0433

Alternate gene names: NA

Gene position: 481962-480943 (Counterclockwise)

Preceding gene: 54293385

Following gene: 54293383

Centisome position: 14.41

GC content: 38.73

Gene sequence:

>1020_bases
ATGCCTATCAGTAATGCCTTTCTTAAGTTATTCAGTGAATTTGTTGATAATTATGCGCGCAATGGCACCCCTTCATTTTA
TCAGTGGGCAAAGGAACAAAACCATGAAGTCATTAACAAATTTTTCCATGAGCTTTTGGAAATTATTAAATCAAACACAG
AAACATTTCATGATGTCAGTATCATAGAGCACCTTAATGCTACAGTACTATTATCAGCAAAGACCAATCCCTACTTACTC
GATTGTTGGATTTCATTTATTACTAAATACAATGCTGAAACCAACAGTTTTACCCCAATAGGGGCTTCGATGCACATTAA
AGTCGGACCAGAAGGCACGCCATCCGAACGGATAATAAGGGAGCTCAAAGAAAGTCTGGTCATGACGCAACAAGCGTTTA
TTTTAGCTCAAAAGGCCAATGCTACGGAAGTTGATTCTTTAAAAAGACAACTTGAGCAAACAAAGCAAGAAAACGAGCGC
TTAGTCACACAAAATCAGTTTCTAAAGGATCAAGTCAGGGCAGAGAAAACATTTGCAAACCTTAACCCACAGATTAACAA
TGCTCGGCAGCAACTCAGTGCTTTAACAGAATTAATACAAACTCTAAGCGAAATCACAAATGCCAAACCCAAAATAGAAA
CTGTATCTTCCTTATCCATTCCAGTTGTTACAGAAAATAAATCTGAACTTCTAAAGGAAAATTCATGCTCTGTCGCTTCT
GTATCCAAGAAAGTTACTCCTGCAATCTGTCAAGAGCCGAGAAAAAGACCAGTCCCACCGCCCCCCAATGATATGGATGG
TCAAGCATTATCCCCCAATATACCCCCTAAGGAAGATGTGTCTATAAAAGTTACAATACCGTCCTTGCCCAAACCAAATT
CAACCCAGCCTACTGCAAAAAATTCAGGTTTCTTTTCAGGCGATGGTTTTTTAAAAGAGTTAAATGCAAAAATTAAAGAA
AGAAAGGAACGCCCAAAGGATGAGCCACATACCACTCCCGTCGAAAAAAAAAATCTCTAG

Upstream 100 bases:

>100_bases
TCTATAAAATTATTTTTTAACTTCACAACAGCTATTGAACTTTAATTTAAGTTGATATTAAATGAAACACTATGATTCCA
TGGACCAGGAGTTAATTACC

Downstream 100 bases:

>100_bases
TTAAGCCAACTTCTGTTCCTCCTGAATATAGGGCACTCTTAGCTAAAATGGAGGAAATTAGAAATGCAGTAACAGGAAAA
TATCCTCATACCAATGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MPISNAFLKLFSEFVDNYARNGTPSFYQWAKEQNHEVINKFFHELLEIIKSNTETFHDVSIIEHLNATVLLSAKTNPYLL
DCWISFITKYNAETNSFTPIGASMHIKVGPEGTPSERIIRELKESLVMTQQAFILAQKANATEVDSLKRQLEQTKQENER
LVTQNQFLKDQVRAEKTFANLNPQINNARQQLSALTELIQTLSEITNAKPKIETVSSLSIPVVTENKSELLKENSCSVAS
VSKKVTPAICQEPRKRPVPPPPNDMDGQALSPNIPPKEDVSIKVTIPSLPKPNSTQPTAKNSGFFSGDGFLKELNAKIKE
RKERPKDEPHTTPVEKKNL

Sequences:

>Translated_339_residues
MPISNAFLKLFSEFVDNYARNGTPSFYQWAKEQNHEVINKFFHELLEIIKSNTETFHDVSIIEHLNATVLLSAKTNPYLL
DCWISFITKYNAETNSFTPIGASMHIKVGPEGTPSERIIRELKESLVMTQQAFILAQKANATEVDSLKRQLEQTKQENER
LVTQNQFLKDQVRAEKTFANLNPQINNARQQLSALTELIQTLSEITNAKPKIETVSSLSIPVVTENKSELLKENSCSVAS
VSKKVTPAICQEPRKRPVPPPPNDMDGQALSPNIPPKEDVSIKVTIPSLPKPNSTQPTAKNSGFFSGDGFLKELNAKIKE
RKERPKDEPHTTPVEKKNL
>Mature_338_residues
PISNAFLKLFSEFVDNYARNGTPSFYQWAKEQNHEVINKFFHELLEIIKSNTETFHDVSIIEHLNATVLLSAKTNPYLLD
CWISFITKYNAETNSFTPIGASMHIKVGPEGTPSERIIRELKESLVMTQQAFILAQKANATEVDSLKRQLEQTKQENERL
VTQNQFLKDQVRAEKTFANLNPQINNARQQLSALTELIQTLSEITNAKPKIETVSSLSIPVVTENKSELLKENSCSVASV
SKKVTPAICQEPRKRPVPPPPNDMDGQALSPNIPPKEDVSIKVTIPSLPKPNSTQPTAKNSGFFSGDGFLKELNAKIKER
KERPKDEPHTTPVEKKNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38105; Mature: 37974

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISNAFLKLFSEFVDNYARNGTPSFYQWAKEQNHEVINKFFHELLEIIKSNTETFHDVS
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHH
IIEHLNATVLLSAKTNPYLLDCWISFITKYNAETNSFTPIGASMHIKVGPEGTPSERIIR
HHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHH
ELKESLVMTQQAFILAQKANATEVDSLKRQLEQTKQENERLVTQNQFLKDQVRAEKTFAN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNPQINNARQQLSALTELIQTLSEITNAKPKIETVSSLSIPVVTENKSELLKENSCSVAS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCHHHHHHCCCCCHHH
VSKKVTPAICQEPRKRPVPPPPNDMDGQALSPNIPPKEDVSIKVTIPSLPKPNSTQPTAK
HHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
NSGFFSGDGFLKELNAKIKERKERPKDEPHTTPVEKKNL
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PISNAFLKLFSEFVDNYARNGTPSFYQWAKEQNHEVINKFFHELLEIIKSNTETFHDVS
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHH
IIEHLNATVLLSAKTNPYLLDCWISFITKYNAETNSFTPIGASMHIKVGPEGTPSERIIR
HHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHH
ELKESLVMTQQAFILAQKANATEVDSLKRQLEQTKQENERLVTQNQFLKDQVRAEKTFAN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNPQINNARQQLSALTELIQTLSEITNAKPKIETVSSLSIPVVTENKSELLKENSCSVAS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCHHHHHHCCCCCHHH
VSKKVTPAICQEPRKRPVPPPPNDMDGQALSPNIPPKEDVSIKVTIPSLPKPNSTQPTAK
HHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
NSGFFSGDGFLKELNAKIKERKERPKDEPHTTPVEKKNL
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA