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The map label for this gene is 54293385

Identifier: 54293385

GI number: 54293385

Start: 482078

End: 482716

Strand: Reverse

Name: 54293385

Synonym: lpl0434

Alternate gene names: NA

Gene position: 482716-482078 (Counterclockwise)

Preceding gene: 54293386

Following gene: 54293384

Centisome position: 14.43

GC content: 37.72

Gene sequence:

>639_bases
TTGTTTAATCCGGACTTAATCGCCCATAATATTTGTACTCAAGGCTTTCATATCATTGATGAATTTCTGGAAGAGGCACA
CTACTGCTCTTTACGAGACATGGCTTATGAATTAAAACAGCAAAATTTATTCAGAAATGCCAAAATTGGCCAGAACTTAC
AAACGCAGCAAAATGACAAGATTAGAAGCGATCAAATTTTCTGGATAGATGCAGACTCCCCTTATCCACCCATTCAAGCT
TACTTAAAAAAACTTATCTCTTTGGGCAATATTCTGAATCAAACCTTGTATCTTGGTTTAGCAGAATTTGAAACTCATTT
TGCAATTTATCTCCCTGGAACCTTTTATAGAAAGCACATTGATCAATTTGAAAGTACAAAAACCAGGAAAATATCATTTG
TCTATTATTTGAATGACACTTGGCAAAAAGAATTTGGTGGCGAATTGTTACTCTACAATATTGAAGATGAGCTCATTCAA
AACATTTCTCCATTGGGAAATCGGTTCGTCTGTTTTGATAGTCAATTACCGCACGAAGTCCACCCAACTCAGCGAACGCG
CTTCAGTATGACAGGCTGGATGAAAACACGCTCAACCTCCGTACTGGCCGACAATAAACTGCCCCAAATAACCCAGTAG

Upstream 100 bases:

>100_bases
ACATTTGCAAGGTAATCATTGAATTCATTACCTCATTATTTCCAAAAAATAATTCTTGGCGTACAATGCATTATCACTTT
GCCTGATTGGTGTAGACAGG

Downstream 100 bases:

>100_bases
CACTTTATACGCTGTTCTATAAAATTATTTTTTAACTTCACAACAGCTATTGAACTTTAATTTAAGTTGATATTAAATGA
AACACTATGATTCCATGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Alpha Subunit; Proline Hydroxylase; Oxidoreductase; SM-20 Domain-Containing Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; SM-20-Related Protein; 2OG-Fe(II) Oxygenase Superfamily Protein; SM-20-Like Protein; SM-20 Domain Protein; 2OG-Fe(II) Oxygenase Family Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; 2OG-Fe(II) Oxygenase Family; 2og-Fe(Ii) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit Homologue; Egl Nine-Like Protein

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MFNPDLIAHNICTQGFHIIDEFLEEAHYCSLRDMAYELKQQNLFRNAKIGQNLQTQQNDKIRSDQIFWIDADSPYPPIQA
YLKKLISLGNILNQTLYLGLAEFETHFAIYLPGTFYRKHIDQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQ
NISPLGNRFVCFDSQLPHEVHPTQRTRFSMTGWMKTRSTSVLADNKLPQITQ

Sequences:

>Translated_212_residues
MFNPDLIAHNICTQGFHIIDEFLEEAHYCSLRDMAYELKQQNLFRNAKIGQNLQTQQNDKIRSDQIFWIDADSPYPPIQA
YLKKLISLGNILNQTLYLGLAEFETHFAIYLPGTFYRKHIDQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQ
NISPLGNRFVCFDSQLPHEVHPTQRTRFSMTGWMKTRSTSVLADNKLPQITQ
>Mature_212_residues
MFNPDLIAHNICTQGFHIIDEFLEEAHYCSLRDMAYELKQQNLFRNAKIGQNLQTQQNDKIRSDQIFWIDADSPYPPIQA
YLKKLISLGNILNQTLYLGLAEFETHFAIYLPGTFYRKHIDQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQ
NISPLGNRFVCFDSQLPHEVHPTQRTRFSMTGWMKTRSTSVLADNKLPQITQ

Specific function: Unknown

COG id: COG3751

COG function: function code O; Predicted proline hydroxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71991009, Length=198, Percent_Identity=30.8080808080808, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71991012, Length=198, Percent_Identity=30.8080808080808, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI25152823, Length=198, Percent_Identity=30.8080808080808, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI115533166, Length=198, Percent_Identity=30.8080808080808, Blast_Score=70, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24908; Mature: 24908

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNPDLIAHNICTQGFHIIDEFLEEAHYCSLRDMAYELKQQNLFRNAKIGQNLQTQQNDK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IRSDQIFWIDADSPYPPIQAYLKKLISLGNILNQTLYLGLAEFETHFAIYLPGTFYRKHI
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHH
DQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQNISPLGNRFVCFDSQLPHEV
HHHHCCCCEEEEEEEEECCCHHHHCCCCEEEEECHHHHHHHHCCCCCEEEEECCCCCCCC
HPTQRTRFSMTGWMKTRSTSVLADNKLPQITQ
CCCCHHEEEHHHHHHCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MFNPDLIAHNICTQGFHIIDEFLEEAHYCSLRDMAYELKQQNLFRNAKIGQNLQTQQNDK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IRSDQIFWIDADSPYPPIQAYLKKLISLGNILNQTLYLGLAEFETHFAIYLPGTFYRKHI
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHH
DQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQNISPLGNRFVCFDSQLPHEV
HHHHCCCCEEEEEEEEECCCHHHHCCCCEEEEECHHHHHHHHCCCCCEEEEECCCCCCCC
HPTQRTRFSMTGWMKTRSTSVLADNKLPQITQ
CCCCHHEEEHHHHHHCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA