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The map label for this gene is lvhB8

Identifier: 54293119

GI number: 54293119

Start: 188626

End: 189342

Strand: Direct

Name: lvhB8

Synonym: lpl0158

Alternate gene names: NA

Gene position: 188626-189342 (Clockwise)

Preceding gene: 54293118

Following gene: 54293120

Centisome position: 5.64

GC content: 45.33

Gene sequence:

>717_bases
ATGAGTAAAACCAATTTGAACGATTACTTTAAGCGTGCGCGAAGTTGGGCAGACGACCAGTTTGGCCGAATTGAGCAATC
ACGAAACCGATATCAAGCCGCATTTTTCTCAGCCATGGGTTTAAATGTTGTAGCTCTCATCGTGATAGGGATACTCGCAC
ATTATCAAACCGTAGTACCGATGCTGGTGCATCATTATGACAATGGGGTTACAACCGTTGAACCCATAGAAAACAAAGAA
ATCCCCATAAATCGCGCACAGATTGAAAGCGATATCGCCCGTTATATTCAATACCGCGAATCCTATGATGCATCGAGCTA
TCGCGCTCAATTTGAATTGGTGCACCTGTTATCCAATAGCACGGTTGCCAAGGAATATCTGCAGGAACAGGATGCTGCAA
ATACCGCCTCACCCATCCATGCCTTGGGGAATCATATCAAGCGAGAAGTGCGCATTTACAGCATTAATTTTCTTGATTCC
GTTTTGGCGAATGAAAAAGACCTTCACAAAGATCACCACGCCTTGGCAGAAGTGGTTTTTAGTCTCATAGACACCGACAA
AACCAGTGGTAAAACCACCTCTACACATTACAGCGCCATGATTTCATGGCGATACACCAATCCCCCGGATTCCCCTGAAA
CCCGTTGGAAAAACTGGGATGGATTTGAAGTCACACGCTACTCAAGACAAACCCGTTTGATGGAGGCTCAAGCATGA

Upstream 100 bases:

>100_bases
TAGGCAAGGCATCGCATCTCGTGGAAAAGGGCAAACAACTGGGGGAAGCCAGTCACAATGTATTCAAGCAACTGCATAAA
CACTTAAGAAAAGGAGCATC

Downstream 100 bases:

>100_bases
AAAAAATACTGTTGAGTGCAGCCGCTCTGCTCTTGTCGTTAGGCACCTATGCCCAAAATAACCCAATGTCTTTACCAACC
GACACCCGAATCAAGAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSKTNLNDYFKRARSWADDQFGRIEQSRNRYQAAFFSAMGLNVVALIVIGILAHYQTVVPMLVHHYDNGVTTVEPIENKE
IPINRAQIESDIARYIQYRESYDASSYRAQFELVHLLSNSTVAKEYLQEQDAANTASPIHALGNHIKREVRIYSINFLDS
VLANEKDLHKDHHALAEVVFSLIDTDKTSGKTTSTHYSAMISWRYTNPPDSPETRWKNWDGFEVTRYSRQTRLMEAQA

Sequences:

>Translated_238_residues
MSKTNLNDYFKRARSWADDQFGRIEQSRNRYQAAFFSAMGLNVVALIVIGILAHYQTVVPMLVHHYDNGVTTVEPIENKE
IPINRAQIESDIARYIQYRESYDASSYRAQFELVHLLSNSTVAKEYLQEQDAANTASPIHALGNHIKREVRIYSINFLDS
VLANEKDLHKDHHALAEVVFSLIDTDKTSGKTTSTHYSAMISWRYTNPPDSPETRWKNWDGFEVTRYSRQTRLMEAQA
>Mature_237_residues
SKTNLNDYFKRARSWADDQFGRIEQSRNRYQAAFFSAMGLNVVALIVIGILAHYQTVVPMLVHHYDNGVTTVEPIENKEI
PINRAQIESDIARYIQYRESYDASSYRAQFELVHLLSNSTVAKEYLQEQDAANTASPIHALGNHIKREVRIYSINFLDSV
LANEKDLHKDHHALAEVVFSLIDTDKTSGKTTSTHYSAMISWRYTNPPDSPETRWKNWDGFEVTRYSRQTRLMEAQA

Specific function: Unknown

COG id: COG3736

COG function: function code U; Type IV secretory pathway, component VirB8

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27434; Mature: 27303

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTNLNDYFKRARSWADDQFGRIEQSRNRYQAAFFSAMGLNVVALIVIGILAHYQTVVP
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLVHHYDNGVTTVEPIENKEIPINRAQIESDIARYIQYRESYDASSYRAQFELVHLLSNS
HHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
TVAKEYLQEQDAANTASPIHALGNHIKREVRIYSINFLDSVLANEKDLHKDHHALAEVVF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHCCCHHHHHHHHHHHHHHH
SLIDTDKTSGKTTSTHYSAMISWRYTNPPDSPETRWKNWDGFEVTRYSRQTRLMEAQA
HHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKTNLNDYFKRARSWADDQFGRIEQSRNRYQAAFFSAMGLNVVALIVIGILAHYQTVVP
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLVHHYDNGVTTVEPIENKEIPINRAQIESDIARYIQYRESYDASSYRAQFELVHLLSNS
HHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
TVAKEYLQEQDAANTASPIHALGNHIKREVRIYSINFLDSVLANEKDLHKDHHALAEVVF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHCCCHHHHHHHHHHHHHHH
SLIDTDKTSGKTTSTHYSAMISWRYTNPPDSPETRWKNWDGFEVTRYSRQTRLMEAQA
HHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA