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The map label for this gene is visC [H]

Identifier: 54293044

GI number: 54293044

Start: 94100

End: 95263

Strand: Direct

Name: visC [H]

Synonym: lpl0081

Alternate gene names: 54293044

Gene position: 94100-95263 (Clockwise)

Preceding gene: 54293043

Following gene: 54293048

Centisome position: 2.81

GC content: 42.27

Gene sequence:

>1164_bases
ATGAGCCAACATTTTGATGTACTTGTCATTGGAGGTGGGATTGTTGGCTTGACAGCAGCTTTAGCAATGGCCCAACGCCA
TTATACTGTTGCTGTTATCGATGCAGGGACATTGATGGTCAATACAGACAAGAGTGATTTGCGTGTTTATGCCATCAATA
AGGCATCAAAAATGTTATTAAGTGAATTAGGAGTGTGGCAGCACCTCGATGATGCCCGGGTCGCCCCTTATAATAAAATG
CATGTCTGGGATGGTGTAAGTGGCGCATATATTGACTTTGATTCTCGCAGTATTGCTGAGCCAAATTTAGGGGCAATTAT
TGAAGAGTCAATCTTAAAGCAAGCTCTGTTGCGTCGAATCTCATCAGAATCCAAAATAAGTTTATTTCCTCACAGTGTAA
TAGATGAGGTGTGCCATTTAGAGCGGAGCATCAAGATCTCCGGCCAAAATAATGCCTGGGAAGGGCAGTTATTGATGATC
GCTGATGGAGCTAACTCCCCTATGCGTCATAAGCTTAAGGTGGATGTAACCAGCTGGTCTTATGAGCAGCAAGCATTGGT
CGCAACGGTAAATAGTGAGAAATCACATCAGAATACTGCTTTTCAAGTGTTTCATCCTGATGGCCCTTTAGCTTTTTTGC
CATTATCTAATCTCAATCAATGTTCTATCGTTTGGTCAACTCATGCCGATAATGCGATGCGATTGAAATTACTTGATGAT
AATGAATTTAGCCGGGAATTAACTAAGGCATTTGGAGGTCAGCTAGGGCAAATAAAGGTAGTAAGCAGTCGCCATCAATT
TCCTTTACAGATGAGACATGTCAAGCAATATGCAGGGCATCGCTGGTTATTGCTTGGCGATGCAGCCCACACTATTCATC
CATTAGCCGGTCTTGGGTTAAATGTTGGCCTGGCTGATGTGAAAAGCTGGTTAACCTGTCTTGAAATGGGTAAAGGTGAA
TTGATATCCAAAAAAGTATTAGGGGCATACCAAAGGGAACGCAAGCATTCTGTTTGGCAAATTATTTTGCTTATGGAGGG
ATTTAAAAGATTATTTGGAACCTCCGCATCTCCTGTTACCTCATTACGCAGTCTCGGATTGCGGGCATGCAATGAATTTA
TCCCAATTAAACGATTATTTATGCGCCAGGCTAGCGGTTTATAA

Upstream 100 bases:

>100_bases
TACCGGCATTAAAAAATTTATTAGCGCGATATGCGCGGGGTTTTGGCGGAATTACTCCTGATTTGGTTTGTGAAATTGCA
TTAAGTGCAGGAGAATTTCA

Downstream 100 bases:

>100_bases
GTAATTTTTCGCCAAAGTAAGGCTTTTTTTCAAAAAAAATATAATGCTTAATTTTTAGTTAATAATTGTTATGTATAATT
TTTTTGCTAACCTAAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSQHFDVLVIGGGIVGLTAALAMAQRHYTVAVIDAGTLMVNTDKSDLRVYAINKASKMLLSELGVWQHLDDARVAPYNKM
HVWDGVSGAYIDFDSRSIAEPNLGAIIEESILKQALLRRISSESKISLFPHSVIDEVCHLERSIKISGQNNAWEGQLLMI
ADGANSPMRHKLKVDVTSWSYEQQALVATVNSEKSHQNTAFQVFHPDGPLAFLPLSNLNQCSIVWSTHADNAMRLKLLDD
NEFSRELTKAFGGQLGQIKVVSSRHQFPLQMRHVKQYAGHRWLLLGDAAHTIHPLAGLGLNVGLADVKSWLTCLEMGKGE
LISKKVLGAYQRERKHSVWQIILLMEGFKRLFGTSASPVTSLRSLGLRACNEFIPIKRLFMRQASGL

Sequences:

>Translated_387_residues
MSQHFDVLVIGGGIVGLTAALAMAQRHYTVAVIDAGTLMVNTDKSDLRVYAINKASKMLLSELGVWQHLDDARVAPYNKM
HVWDGVSGAYIDFDSRSIAEPNLGAIIEESILKQALLRRISSESKISLFPHSVIDEVCHLERSIKISGQNNAWEGQLLMI
ADGANSPMRHKLKVDVTSWSYEQQALVATVNSEKSHQNTAFQVFHPDGPLAFLPLSNLNQCSIVWSTHADNAMRLKLLDD
NEFSRELTKAFGGQLGQIKVVSSRHQFPLQMRHVKQYAGHRWLLLGDAAHTIHPLAGLGLNVGLADVKSWLTCLEMGKGE
LISKKVLGAYQRERKHSVWQIILLMEGFKRLFGTSASPVTSLRSLGLRACNEFIPIKRLFMRQASGL
>Mature_386_residues
SQHFDVLVIGGGIVGLTAALAMAQRHYTVAVIDAGTLMVNTDKSDLRVYAINKASKMLLSELGVWQHLDDARVAPYNKMH
VWDGVSGAYIDFDSRSIAEPNLGAIIEESILKQALLRRISSESKISLFPHSVIDEVCHLERSIKISGQNNAWEGQLLMIA
DGANSPMRHKLKVDVTSWSYEQQALVATVNSEKSHQNTAFQVFHPDGPLAFLPLSNLNQCSIVWSTHADNAMRLKLLDDN
EFSRELTKAFGGQLGQIKVVSSRHQFPLQMRHVKQYAGHRWLLLGDAAHTIHPLAGLGLNVGLADVKSWLTCLEMGKGEL
ISKKVLGAYQRERKHSVWQIILLMEGFKRLFGTSASPVTSLRSLGLRACNEFIPIKRLFMRQASGL

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=395, Percent_Identity=32.1518987341772, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI32967307, Length=361, Percent_Identity=31.8559556786704, Blast_Score=154, Evalue=1e-37,
Organism=Escherichia coli, GI1789273, Length=391, Percent_Identity=39.1304347826087, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI1786883, Length=393, Percent_Identity=33.3333333333333, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI1789274, Length=390, Percent_Identity=28.7179487179487, Blast_Score=163, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI25146631, Length=442, Percent_Identity=29.185520361991, Blast_Score=159, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6321694, Length=458, Percent_Identity=27.292576419214, Blast_Score=121, Evalue=2e-28,
Organism=Drosophila melanogaster, GI19920760, Length=439, Percent_Identity=31.8906605922551, Blast_Score=176, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42970; Mature: 42839

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHFDVLVIGGGIVGLTAALAMAQRHYTVAVIDAGTLMVNTDKSDLRVYAINKASKMLL
CCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCCEEEEEECHHHHHHH
SELGVWQHLDDARVAPYNKMHVWDGVSGAYIDFDSRSIAEPNLGAIIEESILKQALLRRI
HHCCHHHCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
SSESKISLFPHSVIDEVCHLERSIKISGQNNAWEGQLLMIADGANSPMRHKLKVDVTSWS
CCCCEEEECCHHHHHHHHHHHCEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCC
YEQQALVATVNSEKSHQNTAFQVFHPDGPLAFLPLSNLNQCSIVWSTHADNAMRLKLLDD
CCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEECC
NEFSRELTKAFGGQLGQIKVVSSRHQFPLQMRHVKQYAGHRWLLLGDAAHTIHPLAGLGL
CHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCC
NVGLADVKSWLTCLEMGKGELISKKVLGAYQRERKHSVWQIILLMEGFKRLFGTSASPVT
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
SLRSLGLRACNEFIPIKRLFMRQASGL
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQHFDVLVIGGGIVGLTAALAMAQRHYTVAVIDAGTLMVNTDKSDLRVYAINKASKMLL
CCCEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCCEEEEEECHHHHHHH
SELGVWQHLDDARVAPYNKMHVWDGVSGAYIDFDSRSIAEPNLGAIIEESILKQALLRRI
HHCCHHHCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
SSESKISLFPHSVIDEVCHLERSIKISGQNNAWEGQLLMIADGANSPMRHKLKVDVTSWS
CCCCEEEECCHHHHHHHHHHHCEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCC
YEQQALVATVNSEKSHQNTAFQVFHPDGPLAFLPLSNLNQCSIVWSTHADNAMRLKLLDD
CCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEECC
NEFSRELTKAFGGQLGQIKVVSSRHQFPLQMRHVKQYAGHRWLLLGDAAHTIHPLAGLGL
CHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCC
NVGLADVKSWLTCLEMGKGELISKKVLGAYQRERKHSVWQIILLMEGFKRLFGTSASPVT
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
SLRSLGLRACNEFIPIKRLFMRQASGL
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]