Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 54292977

GI number: 54292977

Start: 16581

End: 17414

Strand: Direct

Name: yhhW [C]

Synonym: lpl0013

Alternate gene names: 54292977

Gene position: 16581-17414 (Clockwise)

Preceding gene: 54292974

Following gene: 54292978

Centisome position: 0.5

GC content: 41.37

Gene sequence:

>834_bases
ATGAAAGCAATAGAAGTAGAGCAGTTAATCCAGGGAACATTAATACGCGAAGGTGGAGGAGTTAAATTACGTCGCTATAT
AGGAGCTGATAAAACCAATGACTTTGAACCTATACTGCTTTTTGACTATTTTGACAGTTCAGATCCATTGGATTATCTCG
CCGGGTTTCCGCCTCATCCGCATCGCGGATTTGAAACAATTACCTATCTGATGGAAGGAAGCATTACCCATGAAGACAAT
AAGGGTAACAAAGGAGTAATAAACGCAGGTGATGTGCAGTGGATGACTGCAGGAAAAGGGATTATTCATTCGGAAATGCC
TTCGTCTTCAACGGGCCGGTTGCATGGTTTGCAGTTGTGGTTAAATTTGCCTGCTGCAGAAAAATGGCGAGAACCTCGTT
ATCAGGAAAAATCATCGGATCAACTACCTATTGAAGTCATGGAATCAGGTGCAACCATCAAAGTAATAGCAGGAAGAATT
GATCAAGGATTGAGTTCACCCATTGTTGAAATTGCGACCCGACCTTTGTTTCTAGACATCACCCTCCCTGCCAATGCAAC
TATTCAACAAACGATTCCTGATGATTATGAAGCTGTCCTTTTTGTCATTGAAGGTGCTGTGAATACAGGAGGACAGCAAA
TTACCGCAGGGACATTAGCCAGCCTGACAAACGGTGAAAGAATACAAATAGAAGGCAATGAAAATAGAAATCATTGTTTA
CTGATAGCTGCGGCTAGACTTCATGAACCTATTGTTCGCTATGGTCCTTTTATAATGAATACTCAAGAAGAAATTATGCA
GGCAATACATGATTTTCGTACGGGGCATTTTTAG

Upstream 100 bases:

>100_bases
TAACTGAACGTGCCAATAGTTTAAATAATAGTAATTCAATTAGGAAACCATACTATTTTGAACTATCTTAATATAAGACA
GTAATTAATGAGTAATTAAG

Downstream 100 bases:

>100_bases
TTGCTTATTGTGTTGATTTTAGCCGGATAATTAAAACTATTCGGAATGATCTTCATATATTATCTTGGTTGCTCAAAGGA
TTATGAGTACAATGTGAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKAIEVEQLIQGTLIREGGGVKLRRYIGADKTNDFEPILLFDYFDSSDPLDYLAGFPPHPHRGFETITYLMEGSITHEDN
KGNKGVINAGDVQWMTAGKGIIHSEMPSSSTGRLHGLQLWLNLPAAEKWREPRYQEKSSDQLPIEVMESGATIKVIAGRI
DQGLSSPIVEIATRPLFLDITLPANATIQQTIPDDYEAVLFVIEGAVNTGGQQITAGTLASLTNGERIQIEGNENRNHCL
LIAAARLHEPIVRYGPFIMNTQEEIMQAIHDFRTGHF

Sequences:

>Translated_277_residues
MKAIEVEQLIQGTLIREGGGVKLRRYIGADKTNDFEPILLFDYFDSSDPLDYLAGFPPHPHRGFETITYLMEGSITHEDN
KGNKGVINAGDVQWMTAGKGIIHSEMPSSSTGRLHGLQLWLNLPAAEKWREPRYQEKSSDQLPIEVMESGATIKVIAGRI
DQGLSSPIVEIATRPLFLDITLPANATIQQTIPDDYEAVLFVIEGAVNTGGQQITAGTLASLTNGERIQIEGNENRNHCL
LIAAARLHEPIVRYGPFIMNTQEEIMQAIHDFRTGHF
>Mature_277_residues
MKAIEVEQLIQGTLIREGGGVKLRRYIGADKTNDFEPILLFDYFDSSDPLDYLAGFPPHPHRGFETITYLMEGSITHEDN
KGNKGVINAGDVQWMTAGKGIIHSEMPSSSTGRLHGLQLWLNLPAAEKWREPRYQEKSSDQLPIEVMESGATIKVIAGRI
DQGLSSPIVEIATRPLFLDITLPANATIQQTIPDDYEAVLFVIEGAVNTGGQQITAGTLASLTNGERIQIEGNENRNHCL
LIAAARLHEPIVRYGPFIMNTQEEIMQAIHDFRTGHF

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=264, Percent_Identity=44.6969696969697, Blast_Score=211, Evalue=7e-55,
Organism=Homo sapiens, GI4505823, Length=264, Percent_Identity=44.6969696969697, Blast_Score=211, Evalue=7e-55,
Organism=Escherichia coli, GI1789847, Length=95, Percent_Identity=43.1578947368421, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 30690; Mature: 30690

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIEVEQLIQGTLIREGGGVKLRRYIGADKTNDFEPILLFDYFDSSDPLDYLAGFPPHP
CCCCCHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCC
HRGFETITYLMEGSITHEDNKGNKGVINAGDVQWMTAGKGIIHSEMPSSSTGRLHGLQLW
CCCHHHHHHHHCCCEEECCCCCCCCEEECCCEEEEECCCCEEECCCCCCCCCCEEEEEEE
LNLPAAEKWREPRYQEKSSDQLPIEVMESGATIKVIAGRIDQGLSSPIVEIATRPLFLDI
EECCCHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEECHHCCCCCCCHHHHCCCCEEEEE
TLPANATIQQTIPDDYEAVLFVIEGAVNTGGQQITAGTLASLTNGERIQIEGNENRNHCL
ECCCCCEEECCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEEECCCCCCEEE
LIAAARLHEPIVRYGPFIMNTQEEIMQAIHDFRTGHF
EEEEHHHHCCHHHHCCEEECCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKAIEVEQLIQGTLIREGGGVKLRRYIGADKTNDFEPILLFDYFDSSDPLDYLAGFPPHP
CCCCCHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCC
HRGFETITYLMEGSITHEDNKGNKGVINAGDVQWMTAGKGIIHSEMPSSSTGRLHGLQLW
CCCHHHHHHHHCCCEEECCCCCCCCEEECCCEEEEECCCCEEECCCCCCCCCCEEEEEEE
LNLPAAEKWREPRYQEKSSDQLPIEVMESGATIKVIAGRIDQGLSSPIVEIATRPLFLDI
EECCCHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEECHHCCCCCCCHHHHCCCCEEEEE
TLPANATIQQTIPDDYEAVLFVIEGAVNTGGQQITAGTLASLTNGERIQIEGNENRNHCL
ECCCCCEEECCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEEECCCCCCEEE
LIAAARLHEPIVRYGPFIMNTQEEIMQAIHDFRTGHF
EEEEHHHHCCHHHHCCEEECCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]