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The map label for this gene is 54292978

Identifier: 54292978

GI number: 54292978

Start: 17947

End: 19062

Strand: Direct

Name: 54292978

Synonym: lpl0014

Alternate gene names: NA

Gene position: 17947-19062 (Clockwise)

Preceding gene: 54292977

Following gene: 54292979

Centisome position: 0.54

GC content: 39.87

Gene sequence:

>1116_bases
GTGGCTTATGTGCTGCAAGGCGGCGGATCTTTGGGAGCCTATCAATTTGGTGTGGTTAAAGGGCTTCTTGAAGCCGGGTA
TGAACCGGACTGGATTGCAGCAACCTCTATTGGTGCCATACAAGCAGCGATTATTGTAGGAAATCCTCCAGAAAAGCGTA
TTGAAAAACTCGAAAGATTTTGGGATGAAATTGCCCCGGGTAATTTTTTCGATTTTTTAGGTGAATCTGATATCACTTTA
GATTTTTATAATAAATTAAGTGCCGCTTGTGCTTTATTATTTGGCCAGCCTGAGTTTTTTTTTCCAAAATGGTGCACCGG
AACAATTCCTTTATGGGGTGATCCAACGACTCTGAGCTATTATGATACGACTCCTCTTCGCAAGACATTGCTGGATCTTA
TTGATTTTGAATTGCTAAATTCCTGCCCCATTCGTTTAAGTCTCGGTGCTGTTCAAATCAGCAATGGTCATTTAATCTAT
TTTAATAATATCAATTATCGTATAGAAGTGGAGCACATTATGGCAAGTGCTGCTTTACCTCCGGGCTTTCCTGCAGTTAA
TATCGATGGAGAATTGTATTGGGATGGTGGTGTGCACTCTAACACCCCATTAGAAGTTATTCTGGAGGCCATTCCTGCAG
AAAATACCTTGTGTTTTCTAATTGATTGTTTTGGTGGGCGATCGTTTATTCCCAAAAGCATGAGTGAAATTGAAGAGAGA
AGAAAAGATATTTCATATGGAACCCATGCCCAACGTACTATTTACAATTATTTGCAGAGACAAAAAATGCGAAACTCAAT
GATGGAATTAAGCCGTATTTTAACGGATGAACAAAAGAAGGAGAGCGCTCATTTGTTAGATATTGGAAGCCCTCATCATT
GTACCTTGGTTCATTTGGCTTACAGTTCAAGAATAGTAAAAGCGGCTTCGAAGGATTACAACTTTGGCCGAGTGGTTATT
AAGAAGCGAATGGAATGTGGGTATTCAGATGCCAAGGCTGTGCTGGCAGAAGAATCTCAATGGGGTTATTTACCTGAGGA
TGGAAAAAGCCGATTATATGAGTCACCTAACAATTTTTCCAGATTGTTTCGAAAACGGAAAAAAGAGGTATTTTAG

Upstream 100 bases:

>100_bases
TTTTATGAGTTTGGAAGTGGAGCCTAAACCGCGCGGTAATAATCCTTATGCCAATCGCTTTGATAACTTACCCCTCAAGG
CTCAAGGACGTTTCCCCCGT

Downstream 100 bases:

>100_bases
TTTTAATGCCGAAAAAGGGAGAGCCTTGTCATGGGGTTTCTCTCTTTGAGAGATAAACTGATGTTGTATTATAGAGTCAT
CATCAAAGAGGCGCTGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: Patatin-Like Phospholipase; Esterase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Alpha/Beta Hydrolase; Transmembrane Protein; Serine Protease; Patatin Family Phospholipase; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; Patatin-Like Phospholipase Family; FabD/Lysophospholipase; Esterase Of Alpha-Beta Hydrolase Superfamily; Dehydrogenase/Reductase; Alpha/Beta Fold Family Hydrolase; Phospholipase Patatin Family Protein; Phospholipase; Transpatatin- Like Phospholipase Domain-Containing Protein

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MAYVLQGGGSLGAYQFGVVKGLLEAGYEPDWIAATSIGAIQAAIIVGNPPEKRIEKLERFWDEIAPGNFFDFLGESDITL
DFYNKLSAACALLFGQPEFFFPKWCTGTIPLWGDPTTLSYYDTTPLRKTLLDLIDFELLNSCPIRLSLGAVQISNGHLIY
FNNINYRIEVEHIMASAALPPGFPAVNIDGELYWDGGVHSNTPLEVILEAIPAENTLCFLIDCFGGRSFIPKSMSEIEER
RKDISYGTHAQRTIYNYLQRQKMRNSMMELSRILTDEQKKESAHLLDIGSPHHCTLVHLAYSSRIVKAASKDYNFGRVVI
KKRMECGYSDAKAVLAEESQWGYLPEDGKSRLYESPNNFSRLFRKRKKEVF

Sequences:

>Translated_371_residues
MAYVLQGGGSLGAYQFGVVKGLLEAGYEPDWIAATSIGAIQAAIIVGNPPEKRIEKLERFWDEIAPGNFFDFLGESDITL
DFYNKLSAACALLFGQPEFFFPKWCTGTIPLWGDPTTLSYYDTTPLRKTLLDLIDFELLNSCPIRLSLGAVQISNGHLIY
FNNINYRIEVEHIMASAALPPGFPAVNIDGELYWDGGVHSNTPLEVILEAIPAENTLCFLIDCFGGRSFIPKSMSEIEER
RKDISYGTHAQRTIYNYLQRQKMRNSMMELSRILTDEQKKESAHLLDIGSPHHCTLVHLAYSSRIVKAASKDYNFGRVVI
KKRMECGYSDAKAVLAEESQWGYLPEDGKSRLYESPNNFSRLFRKRKKEVF
>Mature_370_residues
AYVLQGGGSLGAYQFGVVKGLLEAGYEPDWIAATSIGAIQAAIIVGNPPEKRIEKLERFWDEIAPGNFFDFLGESDITLD
FYNKLSAACALLFGQPEFFFPKWCTGTIPLWGDPTTLSYYDTTPLRKTLLDLIDFELLNSCPIRLSLGAVQISNGHLIYF
NNINYRIEVEHIMASAALPPGFPAVNIDGELYWDGGVHSNTPLEVILEAIPAENTLCFLIDCFGGRSFIPKSMSEIEERR
KDISYGTHAQRTIYNYLQRQKMRNSMMELSRILTDEQKKESAHLLDIGSPHHCTLVHLAYSSRIVKAASKDYNFGRVVIK
KRMECGYSDAKAVLAEESQWGYLPEDGKSRLYESPNNFSRLFRKRKKEVF

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41884; Mature: 41753

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYVLQGGGSLGAYQFGVVKGLLEAGYEPDWIAATSIGAIQAAIIVGNPPEKRIEKLERF
CEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHH
WDEIAPGNFFDFLGESDITLDFYNKLSAACALLFGQPEFFFPKWCTGTIPLWGDPTTLSY
HHHHCCCCHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE
YDTTPLRKTLLDLIDFELLNSCPIRLSLGAVQISNGHLIYFNNINYRIEVEHIMASAALP
ECCCHHHHHHHHHHHHHHHCCCCCEEEECEEEECCCEEEEECCCCEEEEHHHHHHHHCCC
PGFPAVNIDGELYWDGGVHSNTPLEVILEAIPAENTLCFLIDCFGGRSFIPKSMSEIEER
CCCCEEECCCEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
RKDISYGTHAQRTIYNYLQRQKMRNSMMELSRILTDEQKKESAHLLDIGSPHHCTLVHLA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCCCEEEEEEE
YSSRIVKAASKDYNFGRVVIKKRMECGYSDAKAVLAEESQWGYLPEDGKSRLYESPNNFS
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHH
RLFRKRKKEVF
HHHHHHHHCCC
>Mature Secondary Structure 
AYVLQGGGSLGAYQFGVVKGLLEAGYEPDWIAATSIGAIQAAIIVGNPPEKRIEKLERF
EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHH
WDEIAPGNFFDFLGESDITLDFYNKLSAACALLFGQPEFFFPKWCTGTIPLWGDPTTLSY
HHHHCCCCHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE
YDTTPLRKTLLDLIDFELLNSCPIRLSLGAVQISNGHLIYFNNINYRIEVEHIMASAALP
ECCCHHHHHHHHHHHHHHHCCCCCEEEECEEEECCCEEEEECCCCEEEEHHHHHHHHCCC
PGFPAVNIDGELYWDGGVHSNTPLEVILEAIPAENTLCFLIDCFGGRSFIPKSMSEIEER
CCCCEEECCCEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
RKDISYGTHAQRTIYNYLQRQKMRNSMMELSRILTDEQKKESAHLLDIGSPHHCTLVHLA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCCCCEEEEEEE
YSSRIVKAASKDYNFGRVVIKKRMECGYSDAKAVLAEESQWGYLPEDGKSRLYESPNNFS
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHH
RLFRKRKKEVF
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA