| Definition | Legionella pneumophila str. Paris, complete genome. |
|---|---|
| Accession | NC_006368 |
| Length | 3,503,610 |
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The map label for this gene is kcy [H]
Identifier: 54297330
GI number: 54297330
Start: 1532453
End: 1533145
Strand: Direct
Name: kcy [H]
Synonym: lpp1375
Alternate gene names: 54297330
Gene position: 1532453-1533145 (Clockwise)
Preceding gene: 54297329
Following gene: 54297331
Centisome position: 43.74
GC content: 40.55
Gene sequence:
>693_bases ATGGTTTTTAATAATGAGGTTCCTGTCATTACGTTGGATGGTCCAAGTGGAACAGGAAAGGGGACAATTTGTCATTTGGT AGCCAAGAGACTGCATTGGAATATGCTTGACAGTGGTGCTATTTATCGTGTTCTAGCTTATGCTGCTCGGAAAAATAGCA TCGAACCGAATGATATTAAAAAATTGACTGCTTTGGCCCGTTCCTTGAATTTGCGTTTTGAATCATCTGCGGATAATGAA TCAAAAGTAATACTTGATGATGAAAATGTCAGCCAGCAAATCCGCAGTGAACAATGTGGTCAGGATGCCTCGCAAATTGC AGTGATTCCTGAAGTAAGAGCAGCACTGCTTGAACGCCAGAGAAACTTTGCCCAATTTCCTGGATTGGTGACCGATGGAC GCGATATGGGTACGGTGGTTTTTCCAAATGCTGTTTTGAAGGTTTATTTATATGCAAGTGCAGAAGAAAGAGCAAATAGA CGATATTTACAGTTGCAAGATAATGGAATTAATGTTAGCCTCGCCCAGGTTGTAGAAGAACTGGCTAAACGGGATGCAAG GGATACAGCTCGTACGCATGCGCCATTAAAACCAGCTGAAGATGCTGTCTTGATCGATACAACCGGACTAACAATTGTAC AAGTGTTCAATATTGTATTAAAATTAATTGATGAACGTTTGAATAATTTGTAG
Upstream 100 bases:
>100_bases CTCCTGTAACGATTAAAAACTGCGCCAATGTTGCAACTTCATTTCCATCTTTTGTTACTACCGCTAACATGCTTCATTTT CAGATAGAGGAATACAGCTG
Downstream 100 bases:
>100_bases TTTTGAATTGGGGGGAAGGTGAGTGGAATTCATTCTTCCATTTTTTTACTAAAGAGTTTATTAACATGTCTGAAAGTTTC AAAGAATTATTTGAGCAAAG
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MVFNNEVPVITLDGPSGTGKGTICHLVAKRLHWNMLDSGAIYRVLAYAARKNSIEPNDIKKLTALARSLNLRFESSADNE SKVILDDENVSQQIRSEQCGQDASQIAVIPEVRAALLERQRNFAQFPGLVTDGRDMGTVVFPNAVLKVYLYASAEERANR RYLQLQDNGINVSLAQVVEELAKRDARDTARTHAPLKPAEDAVLIDTTGLTIVQVFNIVLKLIDERLNNL
Sequences:
>Translated_230_residues MVFNNEVPVITLDGPSGTGKGTICHLVAKRLHWNMLDSGAIYRVLAYAARKNSIEPNDIKKLTALARSLNLRFESSADNE SKVILDDENVSQQIRSEQCGQDASQIAVIPEVRAALLERQRNFAQFPGLVTDGRDMGTVVFPNAVLKVYLYASAEERANR RYLQLQDNGINVSLAQVVEELAKRDARDTARTHAPLKPAEDAVLIDTTGLTIVQVFNIVLKLIDERLNNL >Mature_230_residues MVFNNEVPVITLDGPSGTGKGTICHLVAKRLHWNMLDSGAIYRVLAYAARKNSIEPNDIKKLTALARSLNLRFESSADNE SKVILDDENVSQQIRSEQCGQDASQIAVIPEVRAALLERQRNFAQFPGLVTDGRDMGTVVFPNAVLKVYLYASAEERANR RYLQLQDNGINVSLAQVVEELAKRDARDTARTHAPLKPAEDAVLIDTTGLTIVQVFNIVLKLIDERLNNL
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787139, Length=220, Percent_Identity=50.9090909090909, Blast_Score=223, Evalue=1e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003136 - InterPro: IPR011994 [H]
Pfam domain/function: PF02224 Cytidylate_kin [H]
EC number: =2.7.4.14 [H]
Molecular weight: Translated: 25496; Mature: 25496
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFNNEVPVITLDGPSGTGKGTICHLVAKRLHWNMLDSGAIYRVLAYAARKNSIEPNDIK CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH KLTALARSLNLRFESSADNESKVILDDENVSQQIRSEQCGQDASQIAVIPEVRAALLERQ HHHHHHHHHCCEECCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHEEECHHHHHHHHHHH RNFAQFPGLVTDGRDMGTVVFPNAVLKVYLYASAEERANRRYLQLQDNGINVSLAQVVEE HHHHHCCCEEECCCCCCEEECCCHHEEEEEEECHHHHCCCCEEEEECCCCCEEHHHHHHH LAKRDARDTARTHAPLKPAEDAVLIDTTGLTIVQVFNIVLKLIDERLNNL HHHCCHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVFNNEVPVITLDGPSGTGKGTICHLVAKRLHWNMLDSGAIYRVLAYAARKNSIEPNDIK CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH KLTALARSLNLRFESSADNESKVILDDENVSQQIRSEQCGQDASQIAVIPEVRAALLERQ HHHHHHHHHCCEECCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHEEECHHHHHHHHHHH RNFAQFPGLVTDGRDMGTVVFPNAVLKVYLYASAEERANRRYLQLQDNGINVSLAQVVEE HHHHHCCCEEECCCCCCEEECCCHHEEEEEEECHHHHCCCCEEEEECCCCCEEHHHHHHH LAKRDARDTARTHAPLKPAEDAVLIDTTGLTIVQVFNIVLKLIDERLNNL HHHCCHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA