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The map label for this gene is 54296843

Identifier: 54296843

GI number: 54296843

Start: 993489

End: 994739

Strand: Direct

Name: 54296843

Synonym: lpp0884

Alternate gene names: NA

Gene position: 993489-994739 (Clockwise)

Preceding gene: 54296842

Following gene: 54296848

Centisome position: 28.36

GC content: 35.01

Gene sequence:

>1251_bases
GTGCGATTAACCATAATGGATACCAAGGGTATTTTATTAGCTCCTTTTTTCTTTATTTCATTTATGTTTTTTATTCCGAT
CAGTCCCACGATAAAGTCTATTTGTTTCATTTGCAGTTTAATTGCCGTATTGATTACTCCACAATACAGAAAACATATTG
TTTATGCTTATAATACTTTGTGGGGACGCGCTGCATTTTGTTTGTTTCTCTTTGTCGTTATTGCAAGTTTATGGAGTCCT
GCGCCTTATTCAATGCAATGGATGGTTATTGGTAAATATTGTAAGTTAATTTATCTTCCCATTTTAGCTACTGGTTTTAT
TAATCCCAAAGTAAGAAACTGGAGTATCAATAGCTATTTGGCTGCTATTTTTATTACTTGTGTTATTTCCATCTTAAAAG
CTAAAAATATTATTGCGTCAGAAGATCCGGGCGAGGTTTTCTACAATCATATTATTACTGGTTTTATGGTGGCATTGGCA
GCCTATTTAGCAGGATTGCTGGCTTTTCAAAGTTCGGGCTGGTTGCGACTTATTTATATCTTCATGATATTACTAACCAG
TTACCAAGTGCTTTTTATAAATACTGGAAGAACGGGTTATTTGGTCTACTTTATTTTGATGTTATTGCTTTTGATACAAA
AATTAAACTTCAAACAGGCTTTAGCAGGGATTGTTCTCTTCAGCGGCATCATTGCTTTGGCATATCATCATAGCCCTGTA
ATGCAAACCAGAATTTATGATTTAATTCAGGATATCAAGCTATTAAAACAACATAATAAAAATACATCGATAGGCTATAG
AATGCAGTTTCATCACTATGCCAAGCAATTGATGTTGAAACATCCTTTTATTGGAATAGGCACAGGTGGATTTAAATATA
GTTATTCACAAGATGTACCTGTTCCAAGTTGGGGTAAAGAGTTGACAGATCCACACAGTCAGTATTGGATGACTTTGGCT
GAGCAAGGTTTAATTGGTCTGGTACTTTTGATAATATTTTTAGCGAGTTTGTTTATTACATCATTTCAATTGACTAGCTC
CAGACCTATTCTTTTAGGTGTTTTATTTTCTTTTTGTATAGGCTCCATTTCCGACACGATTTTATGCTATTCGACTGCAG
GTTATTTGTTGGTAGTGATGAGTGCATTATGTTTTGGTGAGTTAATTGAGAAGCGTAGAGTCAAGGACGCAAAAGAAGAC
CATCCTGCTCTTTTATCAGCCCATGCTCCAGCAGCAATAAGTCAGACCTAA

Upstream 100 bases:

>100_bases
TTGGGGCGCAAGGCGCTTTTTATCGCGGGGTCAAACAAATATATAAAGACAGGGATATCAATAAATTACCCAGTGTAAAT
CATATAAAAGAGGAATAATC

Downstream 100 bases:

>100_bases
TCAATAAACAGAAATTTGCTCAACAGGTTTTTGCAATGAACATTCTTCCGAAACATATCCGTCATTGCAAACCACAAGAC
CCGATGAGTTTAATTGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: O-Antigen Ligase; O-Antigen Polymerase

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MRLTIMDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTLWGRAAFCLFLFVVIASLWSP
APYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALA
AYLAGLLAFQSSGWLRLIYIFMILLTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPV
MQTRIYDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMLKHPFIGIGTGGFKYSYSQDVPVPSWGKELTDPHSQYWMTLA
EQGLIGLVLLIIFLASLFITSFQLTSSRPILLGVLFSFCIGSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKDAKED
HPALLSAHAPAAISQT

Sequences:

>Translated_416_residues
MRLTIMDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTLWGRAAFCLFLFVVIASLWSP
APYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALA
AYLAGLLAFQSSGWLRLIYIFMILLTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPV
MQTRIYDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMLKHPFIGIGTGGFKYSYSQDVPVPSWGKELTDPHSQYWMTLA
EQGLIGLVLLIIFLASLFITSFQLTSSRPILLGVLFSFCIGSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKDAKED
HPALLSAHAPAAISQT
>Mature_416_residues
MRLTIMDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTLWGRAAFCLFLFVVIASLWSP
APYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALA
AYLAGLLAFQSSGWLRLIYIFMILLTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPV
MQTRIYDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMLKHPFIGIGTGGFKYSYSQDVPVPSWGKELTDPHSQYWMTLA
EQGLIGLVLLIIFLASLFITSFQLTSSRPILLGVLFSFCIGSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKDAKED
HPALLSAHAPAAISQT

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46927; Mature: 46927

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTIMDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTL
CEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
WGRAAFCLFLFVVIASLWSPAPYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYL
HHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALAAYLAGLLAFQSSGWLRLIYI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FMILLTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPV
HHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
MQTRIYDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMLKHPFIGIGTGGFKYSYSQDVP
HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC
VPSWGKELTDPHSQYWMTLAEQGLIGLVLLIIFLASLFITSFQLTSSRPILLGVLFSFCI
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKDAKEDHPALLSAHAPAAISQT
HHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MRLTIMDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTL
CEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
WGRAAFCLFLFVVIASLWSPAPYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYL
HHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALAAYLAGLLAFQSSGWLRLIYI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FMILLTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPV
HHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
MQTRIYDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMLKHPFIGIGTGGFKYSYSQDVP
HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC
VPSWGKELTDPHSQYWMTLAEQGLIGLVLLIIFLASLFITSFQLTSSRPILLGVLFSFCI
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKDAKEDHPALLSAHAPAAISQT
HHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA