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The map label for this gene is yidD [C]

Identifier: 54027645

GI number: 54027645

Start: 6019635

End: 6019991

Strand: Reverse

Name: yidD [C]

Synonym: nfa56710

Alternate gene names: 54027645

Gene position: 6019991-6019635 (Counterclockwise)

Preceding gene: 54027646

Following gene: 54027644

Centisome position: 99.98

GC content: 71.43

Gene sequence:

>357_bases
GTGAGATCCGCAGCTGCCGCCCTCCACCGGTTGCCCGCGCGGGCGCTGATCTTCCTGATCGAGCTCTACCGGACCTATGT
CTCCCCCACCCGGATGCCGGTGTGCCGGTTCACCCCCACCTGCAGCGAGTACGCCGTGACCGCGTTGCGCACCCGCGGCC
TCGTCGTCGGCCTCGGATTGACGGCCGTGCGCCTGGCCAAATGCGCGCCCTGGCACCCTGGTGGGTGGGATCCCGTTCCG
CAGCGCCGTCCGCGCCGCCGGGACGCGGCAGCCGCCGACGCCGCGATGTCGGCGCCACACGCTTGTAAAGGATCGCCGCA
CGCGGTGGTCGGCGACACGAACGACGGGAGTACATAG

Upstream 100 bases:

>100_bases
TGCGCAGCGGACTGCGCAAACTCGGCGTCACCCCCGGCGGTGGTCGCTCCCCCGCGCCACGTGCGCACTCCGGTGCGCGG
CCACGGACGGACGCCCGGTC

Downstream 100 bases:

>100_bases
AGCCGTGCTCGACTTCATCTATTGGCCGGTGTCCTGGATCTTGTGGTTCTGGCACCGGGTGTTCGGGTTCGCTTTCGGCG
CGGACAACGGTCTCACGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MRSAAAALHRLPARALIFLIELYRTYVSPTRMPVCRFTPTCSEYAVTALRTRGLVVGLGLTAVRLAKCAPWHPGGWDPVP
QRRPRRRDAAAADAAMSAPHACKGSPHAVVGDTNDGST

Sequences:

>Translated_118_residues
MRSAAAALHRLPARALIFLIELYRTYVSPTRMPVCRFTPTCSEYAVTALRTRGLVVGLGLTAVRLAKCAPWHPGGWDPVP
QRRPRRRDAAAADAAMSAPHACKGSPHAVVGDTNDGST
>Mature_118_residues
MRSAAAALHRLPARALIFLIELYRTYVSPTRMPVCRFTPTCSEYAVTALRTRGLVVGLGLTAVRLAKCAPWHPGGWDPVP
QRRPRRRDAAAADAAMSAPHACKGSPHAVVGDTNDGST

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=68, Percent_Identity=54.4117647058823, Blast_Score=75, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5671_NOCFA (Q5YMR8)

Other databases:

- EMBL:   AP006618
- RefSeq:   YP_121887.1
- GeneID:   3110330
- GenomeReviews:   AP006618_GR
- KEGG:   nfa:nfa56710
- HOGENOM:   HBG634291
- OMA:   VAFSPFV
- ProtClustDB:   PRK00041
- BioCyc:   NFAR247156:NFA56710-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 12677; Mature: 12677

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSAAAALHRLPARALIFLIELYRTYVSPTRMPVCRFTPTCSEYAVTALRTRGLVVGLGL
CCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCEEEECCH
TAVRLAKCAPWHPGGWDPVPQRRPRRRDAAAADAAMSAPHACKGSPHAVVGDTNDGST
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MRSAAAALHRLPARALIFLIELYRTYVSPTRMPVCRFTPTCSEYAVTALRTRGLVVGLGL
CCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCEEEECCH
TAVRLAKCAPWHPGGWDPVPQRRPRRRDAAAADAAMSAPHACKGSPHAVVGDTNDGST
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA