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The map label for this gene is parB [H]

Identifier: 54027640

GI number: 54027640

Start: 6010709

End: 6011791

Strand: Reverse

Name: parB [H]

Synonym: nfa56660

Alternate gene names: 54027640

Gene position: 6011791-6010709 (Counterclockwise)

Preceding gene: 54027641

Following gene: 54027639

Centisome position: 99.84

GC content: 68.7

Gene sequence:

>1083_bases
ATGAGTCAGGCGAAGAAGGGCGGACTGGGACGCGGTCTTGCGGCGTTGATCCCGACAGGACCGGACACCATTCCGAACGG
ACTGACCACCCCCACCGCCCCGCCCGGGACAGCCAAGCCCAAGGGACTGGTCACGCCCAACGGGCTCGGCACCGCGGCCG
CGAACGTGATCATCGGCGTGGACCCGGCCGGGGCCAAGCCCGCCTCCCCGCTCCGGTCCGACACTCAGGCGGAGGAACTG
ACCTCGCCGAGCGGCGCGGTCTATCGCGAAATTCCGCCGGATCAGATCGAGCCGAATCCCAAGCAGCCGCGCCAGGTCTT
CGAGGAAGACGCCCTCGCCGAGCTGGTCCACTCCATCCGCGAGTTCGGTCTGATGCAGCCGATCGTCGTGCGGCGGCTGG
AGCCGGGTGTCGACAAGTACCAGCTCGTCATGGGCGAGCGGCGCTGGCGGGCATGCCAGGAAGCGGGCCTCGAGGCGATT
CCGGCGATCGTGCGCGAGACCGCCGATGATGCGCTGCTCCGCGACGCGCTGCTGGAGAACATCCACCGGGTCCAGCTGAA
CCCGCTCGAAGAGGCGGCCGCCTATCAGCAGCTGCTGGAGGAGTTCGGCGTCACCCACGAGGAACTCGCCGCCCGGATCG
GCCGGTCCCGCCCCGTCGTCACCAACATGATCCGGCTGCTGAAACTACCCATTCCCGTGCAGCGTCGGGTGGCGGCGGGC
GTGCTGTCCGCCGGGCATGCGCGGGCGCTGCTCGGGTTGGAGGCCGGACCGGACGCGCAGGAGGCGTTGGCCGCGCGGAT
CGTCGCCGAGGGGATGTCGGTGCGGGCGACCGAGGAGGCGGTGACACTTGCTAATCGCGAGCCGGACTCCGCCGCCACTC
CCCCGGCACCCAAGCGCAAGCCCATCCACATGCCCGGTCTGCAGGACGTCGCGGAGAAGCTGTCGAACTCGTTCGACACT
CGCGTGACGGTGAGCCTGGGCAAGCGCAAGGGCAAGATCGTCGTCGAATTCGGGTCGGTGGAAGACCTCGAACGGATCGT
CGGTCTGATGCAGCAACAGCAGCTTCAGATGTCGTCCGAGTGA

Upstream 100 bases:

>100_bases
CGCGCAGCGCGCGATGGCCCGTCAGATCACGAGCGGTACGGAGTGACCCGGGTCGCGGTGACCCGGTTGTGGCGGAACGA
GGGAAGGGATCGGTAAGCCG

Downstream 100 bases:

>100_bases
CGAAATCAGCACTGATTTCTCGATAACCAGGGACCCGGCGCCGAAACGTCACTGTGACGGCGCGTTCGATCGCGGTCCGG
TGTGCGCTGTTCGCCGGAAA

Product: putative chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSQAKKGGLGRGLAALIPTGPDTIPNGLTTPTAPPGTAKPKGLVTPNGLGTAAANVIIGVDPAGAKPASPLRSDTQAEEL
TSPSGAVYREIPPDQIEPNPKQPRQVFEEDALAELVHSIREFGLMQPIVVRRLEPGVDKYQLVMGERRWRACQEAGLEAI
PAIVRETADDALLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTHEELAARIGRSRPVVTNMIRLLKLPIPVQRRVAAG
VLSAGHARALLGLEAGPDAQEALAARIVAEGMSVRATEEAVTLANREPDSAATPPAPKRKPIHMPGLQDVAEKLSNSFDT
RVTVSLGKRKGKIVVEFGSVEDLERIVGLMQQQQLQMSSE

Sequences:

>Translated_360_residues
MSQAKKGGLGRGLAALIPTGPDTIPNGLTTPTAPPGTAKPKGLVTPNGLGTAAANVIIGVDPAGAKPASPLRSDTQAEEL
TSPSGAVYREIPPDQIEPNPKQPRQVFEEDALAELVHSIREFGLMQPIVVRRLEPGVDKYQLVMGERRWRACQEAGLEAI
PAIVRETADDALLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTHEELAARIGRSRPVVTNMIRLLKLPIPVQRRVAAG
VLSAGHARALLGLEAGPDAQEALAARIVAEGMSVRATEEAVTLANREPDSAATPPAPKRKPIHMPGLQDVAEKLSNSFDT
RVTVSLGKRKGKIVVEFGSVEDLERIVGLMQQQQLQMSSE
>Mature_359_residues
SQAKKGGLGRGLAALIPTGPDTIPNGLTTPTAPPGTAKPKGLVTPNGLGTAAANVIIGVDPAGAKPASPLRSDTQAEELT
SPSGAVYREIPPDQIEPNPKQPRQVFEEDALAELVHSIREFGLMQPIVVRRLEPGVDKYQLVMGERRWRACQEAGLEAIP
AIVRETADDALLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTHEELAARIGRSRPVVTNMIRLLKLPIPVQRRVAAGV
LSAGHARALLGLEAGPDAQEALAARIVAEGMSVRATEEAVTLANREPDSAATPPAPKRKPIHMPGLQDVAEKLSNSFDTR
VTVSLGKRKGKIVVEFGSVEDLERIVGLMQQQQLQMSSE

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 38545; Mature: 38414

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAKKGGLGRGLAALIPTGPDTIPNGLTTPTAPPGTAKPKGLVTPNGLGTAAANVIIGV
CCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEC
DPAGAKPASPLRSDTQAEELTSPSGAVYREIPPDQIEPNPKQPRQVFEEDALAELVHSIR
CCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EFGLMQPIVVRRLEPGVDKYQLVMGERRWRACQEAGLEAIPAIVRETADDALLRDALLEN
HHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IHRVQLNPLEEAAAYQQLLEEFGVTHEELAARIGRSRPVVTNMIRLLKLPIPVQRRVAAG
HHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH
VLSAGHARALLGLEAGPDAQEALAARIVAEGMSVRATEEAVTLANREPDSAATPPAPKRK
HHHCCCHHHEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
PIHMPGLQDVAEKLSNSFDTRVTVSLGKRKGKIVVEFGSVEDLERIVGLMQQQQLQMSSE
CCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQAKKGGLGRGLAALIPTGPDTIPNGLTTPTAPPGTAKPKGLVTPNGLGTAAANVIIGV
CCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEC
DPAGAKPASPLRSDTQAEELTSPSGAVYREIPPDQIEPNPKQPRQVFEEDALAELVHSIR
CCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EFGLMQPIVVRRLEPGVDKYQLVMGERRWRACQEAGLEAIPAIVRETADDALLRDALLEN
HHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IHRVQLNPLEEAAAYQQLLEEFGVTHEELAARIGRSRPVVTNMIRLLKLPIPVQRRVAAG
HHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH
VLSAGHARALLGLEAGPDAQEALAARIVAEGMSVRATEEAVTLANREPDSAATPPAPKRK
HHHCCCHHHEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
PIHMPGLQDVAEKLSNSFDTRVTVSLGKRKGKIVVEFGSVEDLERIVGLMQQQQLQMSSE
CCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]