| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54027639
Identifier: 54027639
GI number: 54027639
Start: 6009763
End: 6010530
Strand: Reverse
Name: 54027639
Synonym: nfa56650
Alternate gene names: NA
Gene position: 6010530-6009763 (Counterclockwise)
Preceding gene: 54027640
Following gene: 54027630
Centisome position: 99.82
GC content: 70.05
Gene sequence:
>768_bases GTGAGCGTGGATGAATCGGACAGCTGGAGGCTGAGCAGAGCGGTGTCGACCAGCGTCACAGCACTTACCCTCGACGGGTT GGACAAGCTGCCCGCACACGCCAGGAGGTGTGTGTTCTGGGAGATCGATCCCGCCGTCGCCGCGGACTCCCACGGATTCA GCGACCCGGTCTTCGAGAAGGAGGCCTGGCTCTCCACGGTCATGCTGGAGTGGGGGTCCTGCGGTCAGGTCGCGCACGTG GACGGTAAGGCAGCCGGCTGCGCGCTGTACTCGCCGCCGACCGCGGTGCCCCGGGCGACGCTGTTCCCTACCTCCCCGGT GAGCCCGGACGCGATTCTGTTGACGACCCTGTGCACCGAGCCCGCGCACCGCGACGACGACATCGCCCACCGCCTGCTCC AAGCCGTCGTCTCGGATCTGGTGCGGCGCGGCGTCCGGGCGCTCGAGGCGTTCGGCATCCGGTCCGGGCCCGCGTCGAAA CCGTTGTCGGACCGGCTCGCCGGGTCGATGCGGCTGATGGAGCGGATCGGCGGGCCGGTGCGCGGCAAGTCGGCGCCGTC GGCCGACTGCTCCCCCGAGACCTGCATGATCGAGGCGGATCTACTGGAGGACTTCGGCTTCGAAGTCGTGGCGCCGCACC ACCGGTTCCCGCGGCTGCGGCTCGAGCTCGACTCCGATCACGGCTGGAAGGAAGATGTCGAACGCGCGCTCGACCAGTTG CTGGCGGCGGCGTCGCTGACCGTGCCGACCCGCGCCGGAGCACGCTGA
Upstream 100 bases:
>100_bases GGTGTGCGCTGTTCGCCGGAAAGTCGCCGCGGTCGGGCCTCCTGATCAACAGCACAGCGACGTGGAATGAGGCAGGTTCT AAGATGATCTGTGATGCGGC
Downstream 100 bases:
>100_bases CCCAGCGCACGAGAAAGCCCCCGTCGAATCACGGTCGACGGGGGCTCTTTCGGTGGTTCAGGAGCGGTCGGCGGCGGCCA GTTCCTCGGCGAGCAGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: GNAT Family Acetyltransferase; Acetyltransferase Family Protein
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MSVDESDSWRLSRAVSTSVTALTLDGLDKLPAHARRCVFWEIDPAVAADSHGFSDPVFEKEAWLSTVMLEWGSCGQVAHV DGKAAGCALYSPPTAVPRATLFPTSPVSPDAILLTTLCTEPAHRDDDIAHRLLQAVVSDLVRRGVRALEAFGIRSGPASK PLSDRLAGSMRLMERIGGPVRGKSAPSADCSPETCMIEADLLEDFGFEVVAPHHRFPRLRLELDSDHGWKEDVERALDQL LAAASLTVPTRAGAR
Sequences:
>Translated_255_residues MSVDESDSWRLSRAVSTSVTALTLDGLDKLPAHARRCVFWEIDPAVAADSHGFSDPVFEKEAWLSTVMLEWGSCGQVAHV DGKAAGCALYSPPTAVPRATLFPTSPVSPDAILLTTLCTEPAHRDDDIAHRLLQAVVSDLVRRGVRALEAFGIRSGPASK PLSDRLAGSMRLMERIGGPVRGKSAPSADCSPETCMIEADLLEDFGFEVVAPHHRFPRLRLELDSDHGWKEDVERALDQL LAAASLTVPTRAGAR >Mature_254_residues SVDESDSWRLSRAVSTSVTALTLDGLDKLPAHARRCVFWEIDPAVAADSHGFSDPVFEKEAWLSTVMLEWGSCGQVAHVD GKAAGCALYSPPTAVPRATLFPTSPVSPDAILLTTLCTEPAHRDDDIAHRLLQAVVSDLVRRGVRALEAFGIRSGPASKP LSDRLAGSMRLMERIGGPVRGKSAPSADCSPETCMIEADLLEDFGFEVVAPHHRFPRLRLELDSDHGWKEDVERALDQLL AAASLTVPTRAGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27531; Mature: 27400
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDESDSWRLSRAVSTSVTALTLDGLDKLPAHARRCVFWEIDPAVAADSHGFSDPVFEK CCCCCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHH EAWLSTVMLEWGSCGQVAHVDGKAAGCALYSPPTAVPRATLFPTSPVSPDAILLTTLCTE HHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCCCCEECCCCCCCCCCEEHHHHHCC PAHRDDDIAHRLLQAVVSDLVRRGVRALEAFGIRSGPASKPLSDRLAGSMRLMERIGGPV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC RGKSAPSADCSPETCMIEADLLEDFGFEVVAPHHRFPRLRLELDSDHGWKEDVERALDQL CCCCCCCCCCCCCEEEEEHHHHHHCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHH LAAASLTVPTRAGAR HHHHHCCCCCCCCCC >Mature Secondary Structure SVDESDSWRLSRAVSTSVTALTLDGLDKLPAHARRCVFWEIDPAVAADSHGFSDPVFEK CCCCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHH EAWLSTVMLEWGSCGQVAHVDGKAAGCALYSPPTAVPRATLFPTSPVSPDAILLTTLCTE HHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCCCCEECCCCCCCCCCEEHHHHHCC PAHRDDDIAHRLLQAVVSDLVRRGVRALEAFGIRSGPASKPLSDRLAGSMRLMERIGGPV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC RGKSAPSADCSPETCMIEADLLEDFGFEVVAPHHRFPRLRLELDSDHGWKEDVERALDQL CCCCCCCCCCCCCEEEEEHHHHHHCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHH LAAASLTVPTRAGAR HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA