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The map label for this gene is yhdH [H]

Identifier: 54027587

GI number: 54027587

Start: 5952821

End: 5953816

Strand: Reverse

Name: yhdH [H]

Synonym: nfa56130

Alternate gene names: 54027587

Gene position: 5953816-5952821 (Counterclockwise)

Preceding gene: 54027589

Following gene: 54027583

Centisome position: 98.88

GC content: 70.68

Gene sequence:

>996_bases
ATGGAATTCCGCGCGATGGTGGCACACGAATCGGACAGCGGGATCGTGCTGACCCGGCAGGAACTCGACGAGAATTTCCT
CGGCCAGGGTGCGGTCACGATCAAGGTGCACTTCTCGAGCGCCAATTACAAGGACGCACTGGCCATCACCCCGGGCGGTG
GCGTCGTGCGCAAGTACCCGATCATCCCGGGCATCGACCTCACCGGCGAAGTCGTCTCCTCCGACAGTGCGGAGTTCGCG
CCGGGCGACCAGGTCGTCGCACACGGCTACGACATCGGTGTGGCCCACCACGGCGGCTTCGCCGAGTACGCCAGGGTGCC
CGCCGAGTGGGTGGTGAAACTCGACGGGCTCAGCACCCGCGACGCCGCCGCCATCGGCACCGCGGGCTTCACCGCCGCCC
TCAGCGTCCAGGCCCTGCTCGACCGCGGCCTCACCCCCGACGACGGCGCCATCCTGGTCACCGGCGCGACCGGCGGCGTC
GGCAGCGTCGCCGTCGACATCCTGTCCGGACTCGGCTTCGAGGTCATCGCCTCCACCGGCAAGACCGACGCGGGCGACCT
GCTGTCGGAGATCGGCGCCAACGAGGTCATCGGCCGCCTGCCCGAAGACCCGGACGCCAAGCTGCGCCCGCTGTCCAAGG
CCCGCTGGGCCGGCGCGGTCGACAGCGTCGGCGGCCGCTCGCTCGCCTACATCCTCAGCAGCATCGGATACGGCGGCACC
GTCGCGGCCAGCGGCCTCACCGGCGGCCCCGACCTCCCCGCCACCGTCATGCCGTTCATCCTGCGCGGTGTCGCCCTCAT
CGGCATCGACTCGGTGGCGTACCCCATCGAGAAACGCCGGGCCCTCTGGTCCCGCCTCACCACCGATTTCCGCCCCCGCC
ACCTCACCCAGCTGGAGAACCACGCCCCGGTGACGGACGCGGAGCGGGTCCTGCACGCGATCAAGAACGGCACCCACTCC
CGCCGCACGGTGCTCGGCGTCGCGGGCGAATTCTGA

Upstream 100 bases:

>100_bases
CACCTGCACGGTAACTGCCGCGGAGCGCGAACCGCCCGTGACGGGGCCGATGGCCCGGCATCGCCCCCGGCCGCCCGGCT
CGGCTCGTATGCTCGACCGC

Downstream 100 bases:

>100_bases
GCATCGACGGTCGAATCCCCCCGGGACATCACGGGGGGATTCTCGTTCAGCCCCGGTCGAATTCCCCCGCGCGCACTCCG
GCGAGAAAGGCGCGCCATTC

Product: putative dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MEFRAMVAHESDSGIVLTRQELDENFLGQGAVTIKVHFSSANYKDALAITPGGGVVRKYPIIPGIDLTGEVVSSDSAEFA
PGDQVVAHGYDIGVAHHGGFAEYARVPAEWVVKLDGLSTRDAAAIGTAGFTAALSVQALLDRGLTPDDGAILVTGATGGV
GSVAVDILSGLGFEVIASTGKTDAGDLLSEIGANEVIGRLPEDPDAKLRPLSKARWAGAVDSVGGRSLAYILSSIGYGGT
VAASGLTGGPDLPATVMPFILRGVALIGIDSVAYPIEKRRALWSRLTTDFRPRHLTQLENHAPVTDAERVLHAIKNGTHS
RRTVLGVAGEF

Sequences:

>Translated_331_residues
MEFRAMVAHESDSGIVLTRQELDENFLGQGAVTIKVHFSSANYKDALAITPGGGVVRKYPIIPGIDLTGEVVSSDSAEFA
PGDQVVAHGYDIGVAHHGGFAEYARVPAEWVVKLDGLSTRDAAAIGTAGFTAALSVQALLDRGLTPDDGAILVTGATGGV
GSVAVDILSGLGFEVIASTGKTDAGDLLSEIGANEVIGRLPEDPDAKLRPLSKARWAGAVDSVGGRSLAYILSSIGYGGT
VAASGLTGGPDLPATVMPFILRGVALIGIDSVAYPIEKRRALWSRLTTDFRPRHLTQLENHAPVTDAERVLHAIKNGTHS
RRTVLGVAGEF
>Mature_331_residues
MEFRAMVAHESDSGIVLTRQELDENFLGQGAVTIKVHFSSANYKDALAITPGGGVVRKYPIIPGIDLTGEVVSSDSAEFA
PGDQVVAHGYDIGVAHHGGFAEYARVPAEWVVKLDGLSTRDAAAIGTAGFTAALSVQALLDRGLTPDDGAILVTGATGGV
GSVAVDILSGLGFEVIASTGKTDAGDLLSEIGANEVIGRLPEDPDAKLRPLSKARWAGAVDSVGGRSLAYILSSIGYGGT
VAASGLTGGPDLPATVMPFILRGVALIGIDSVAYPIEKRRALWSRLTTDFRPRHLTQLENHAPVTDAERVLHAIKNGTHS
RRTVLGVAGEF

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=326, Percent_Identity=46.6257668711656, Blast_Score=281, Evalue=4e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34399; Mature: 34399

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFRAMVAHESDSGIVLTRQELDENFLGQGAVTIKVHFSSANYKDALAITPGGGVVRKYP
CCCEEEEEECCCCCEEEEHHHHCHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCEEECC
IIPGIDLTGEVVSSDSAEFAPGDQVVAHGYDIGVAHHGGFAEYARVPAEWVVKLDGLSTR
CCCCCCCCCHHHCCCCCCCCCCCCEEECCEEEEEEECCCHHHHHHCCHHHEEEECCCCCC
DAAAIGTAGFTAALSVQALLDRGLTPDDGAILVTGATGGVGSVAVDILSGLGFEVIASTG
CHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCC
KTDAGDLLSEIGANEVIGRLPEDPDAKLRPLSKARWAGAVDSVGGRSLAYILSSIGYGGT
CCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHCCCHHCCCCHHHHHHHHHCCCCCE
VAASGLTGGPDLPATVMPFILRGVALIGIDSVAYPIEKRRALWSRLTTDFRPRHLTQLEN
EEECCCCCCCCCCHHHHHHHHHHHHHEECCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHC
HAPVTDAERVLHAIKNGTHSRRTVLGVAGEF
CCCCCHHHHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure
MEFRAMVAHESDSGIVLTRQELDENFLGQGAVTIKVHFSSANYKDALAITPGGGVVRKYP
CCCEEEEEECCCCCEEEEHHHHCHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCEEECC
IIPGIDLTGEVVSSDSAEFAPGDQVVAHGYDIGVAHHGGFAEYARVPAEWVVKLDGLSTR
CCCCCCCCCHHHCCCCCCCCCCCCEEECCEEEEEEECCCHHHHHHCCHHHEEEECCCCCC
DAAAIGTAGFTAALSVQALLDRGLTPDDGAILVTGATGGVGSVAVDILSGLGFEVIASTG
CHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCC
KTDAGDLLSEIGANEVIGRLPEDPDAKLRPLSKARWAGAVDSVGGRSLAYILSSIGYGGT
CCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHCCCHHCCCCHHHHHHHHHCCCCCE
VAASGLTGGPDLPATVMPFILRGVALIGIDSVAYPIEKRRALWSRLTTDFRPRHLTQLEN
EEECCCCCCCCCCHHHHHHHHHHHHHEECCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHC
HAPVTDAERVLHAIKNGTHSRRTVLGVAGEF
CCCCCHHHHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]