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The map label for this gene is 54027540

Identifier: 54027540

GI number: 54027540

Start: 5900353

End: 5901510

Strand: Reverse

Name: 54027540

Synonym: nfa55660

Alternate gene names: NA

Gene position: 5901510-5900353 (Counterclockwise)

Preceding gene: 54027541

Following gene: 54027539

Centisome position: 98.01

GC content: 69.95

Gene sequence:

>1158_bases
TTGCGCCACTTCCGGCAGCTGCACGGACCCGACCTCAGACATCTGTTCCACCGGCAGCCGGAGCCGTTCGGCGACCGGGC
CGATCGCGAGTTGCTGGCGATCGCGCTCGGGGCCACGCTCTACGCGCCCGCGACCAGGGCGGACCTGGCGGACACGATCC
GCAGGCGGGCCGAGCGCGGGGTGTGCTCGATGGTGATCGATCTCGAGGACGCCGTCGCCGACCACGAGGTGGAGACGGCC
AAGCGCCGCGCCGTCGCGGCGCTCGACGAGCTCGCCGCCGACGAGGATCCCGCACCCCTGCTGTTCGTGCGGGTGCGCGA
CGCCGACACCATCGGGGAACTGGTCGATCAGCTCGGCCCCGGCGTCGCGGTGCTGACCGGCTTCGTCTTCCCGAAGTTCG
ACAGCGCCTCGGGGCAGAAATACCTGGACGCGCTGGCGGCGGTGGGCGAGCGGCTGGCCAGGCCGGTGTACGGGATGCCG
GTGCTGGAGTCGGCCGCCCTGGTGCATCGGCAGACCCGGGACGGCGAACTCACCCAGATCGCGGCGATGCTCGCCGAGCA
TCGCGAGCGGGTACTCGCGGTGCGCGTGGGCGCCACCGACATGTGCTCGACCTTCGGCATCCGCCGCGACCGCGACCTGA
CCATCTACGACGTGCGGGTGGTGGCCGACGTCATCGCCGACATCGTCAACTACCTCGGCCGCGCCGACGGGACCGGTTTC
GTCATCACCGGACCGGTGTGGGAGTACTTCGCCGACCACGAGCGGATGTTCCGCCCGCTGCTGCGCACGGCGCCGTTCGA
GGAGTCCGACGCGGTGAAGTTCCGCCAGTACCTGGTGAGCCGGGACCTGGACGGGTTGCTGCGCGAGATCACCCTGGACC
GTGCCAACGGCATCCAGGGCAAGACCGTCATCCATCCCTCGCACGTGGCCGCGGTGCACGCGCTGTCGGTGGTGACGCAC
GAGGAGTACTCCGACGCGCTGGACATCCTGCAGGCCGACGTCGGCGGGGTGGCGGCCTCGGAGTACCGCAACAAGATGAA
CGAGATGCGCCCGCATCGCAGCTGGGCCGGGCAGACCATGCTGCGGGCCAGGGTATTCGGGGTGGCGAACAAGGGAGTGT
CCTTCGTGGATCTGCTGACGGCGTTGGTGAAGGTATGA

Upstream 100 bases:

>100_bases
ATGAGAAAGCAATCAGGACCACGACGACCATGAGAACGGAGCATCGATGACCGCTCCCGTCGCCCTCCGACAGGAAGTCT
CCCTGCGGAAGCGACTGCCG

Downstream 100 bases:

>100_bases
GCACGCCGTGGGCGACCCGCACGCTCGGGCTCGCGTTGCGTCATCGGGACGGTGCGGCGGGGACCGCCGCACCCGAGTTG
TCCGTCGAGGTGCTGGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Citrate Lyase Beta Subunit; Citrate Lyase Subunit Beta; Citrate Lyase Beta Subunit-Like

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MRHFRQLHGPDLRHLFHRQPEPFGDRADRELLAIALGATLYAPATRADLADTIRRRAERGVCSMVIDLEDAVADHEVETA
KRRAVAALDELAADEDPAPLLFVRVRDADTIGELVDQLGPGVAVLTGFVFPKFDSASGQKYLDALAAVGERLARPVYGMP
VLESAALVHRQTRDGELTQIAAMLAEHRERVLAVRVGATDMCSTFGIRRDRDLTIYDVRVVADVIADIVNYLGRADGTGF
VITGPVWEYFADHERMFRPLLRTAPFEESDAVKFRQYLVSRDLDGLLREITLDRANGIQGKTVIHPSHVAAVHALSVVTH
EEYSDALDILQADVGGVAASEYRNKMNEMRPHRSWAGQTMLRARVFGVANKGVSFVDLLTALVKV

Sequences:

>Translated_385_residues
MRHFRQLHGPDLRHLFHRQPEPFGDRADRELLAIALGATLYAPATRADLADTIRRRAERGVCSMVIDLEDAVADHEVETA
KRRAVAALDELAADEDPAPLLFVRVRDADTIGELVDQLGPGVAVLTGFVFPKFDSASGQKYLDALAAVGERLARPVYGMP
VLESAALVHRQTRDGELTQIAAMLAEHRERVLAVRVGATDMCSTFGIRRDRDLTIYDVRVVADVIADIVNYLGRADGTGF
VITGPVWEYFADHERMFRPLLRTAPFEESDAVKFRQYLVSRDLDGLLREITLDRANGIQGKTVIHPSHVAAVHALSVVTH
EEYSDALDILQADVGGVAASEYRNKMNEMRPHRSWAGQTMLRARVFGVANKGVSFVDLLTALVKV
>Mature_385_residues
MRHFRQLHGPDLRHLFHRQPEPFGDRADRELLAIALGATLYAPATRADLADTIRRRAERGVCSMVIDLEDAVADHEVETA
KRRAVAALDELAADEDPAPLLFVRVRDADTIGELVDQLGPGVAVLTGFVFPKFDSASGQKYLDALAAVGERLARPVYGMP
VLESAALVHRQTRDGELTQIAAMLAEHRERVLAVRVGATDMCSTFGIRRDRDLTIYDVRVVADVIADIVNYLGRADGTGF
VITGPVWEYFADHERMFRPLLRTAPFEESDAVKFRQYLVSRDLDGLLREITLDRANGIQGKTVIHPSHVAAVHALSVVTH
EEYSDALDILQADVGGVAASEYRNKMNEMRPHRSWAGQTMLRARVFGVANKGVSFVDLLTALVKV

Specific function: Unknown

COG id: COG2301

COG function: function code G; Citrate lyase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42596; Mature: 42596

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHFRQLHGPDLRHLFHRQPEPFGDRADRELLAIALGATLYAPATRADLADTIRRRAERG
CCCCHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
VCSMVIDLEDAVADHEVETAKRRAVAALDELAADEDPAPLLFVRVRDADTIGELVDQLGP
HHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCC
GVAVLTGFVFPKFDSASGQKYLDALAAVGERLARPVYGMPVLESAALVHRQTRDGELTQI
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHH
AAMLAEHRERVLAVRVGATDMCSTFGIRRDRDLTIYDVRVVADVIADIVNYLGRADGTGF
HHHHHHHHHHEEEEECCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCE
VITGPVWEYFADHERMFRPLLRTAPFEESDAVKFRQYLVSRDLDGLLREITLDRANGIQG
EEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC
KTVIHPSHVAAVHALSVVTHEEYSDALDILQADVGGVAASEYRNKMNEMRPHRSWAGQTM
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
LRARVFGVANKGVSFVDLLTALVKV
HHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRHFRQLHGPDLRHLFHRQPEPFGDRADRELLAIALGATLYAPATRADLADTIRRRAERG
CCCCHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
VCSMVIDLEDAVADHEVETAKRRAVAALDELAADEDPAPLLFVRVRDADTIGELVDQLGP
HHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCC
GVAVLTGFVFPKFDSASGQKYLDALAAVGERLARPVYGMPVLESAALVHRQTRDGELTQI
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHH
AAMLAEHRERVLAVRVGATDMCSTFGIRRDRDLTIYDVRVVADVIADIVNYLGRADGTGF
HHHHHHHHHHEEEEECCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCE
VITGPVWEYFADHERMFRPLLRTAPFEESDAVKFRQYLVSRDLDGLLREITLDRANGIQG
EEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC
KTVIHPSHVAAVHALSVVTHEEYSDALDILQADVGGVAASEYRNKMNEMRPHRSWAGQTM
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
LRARVFGVANKGVSFVDLLTALVKV
HHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA