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The map label for this gene is 54027541

Identifier: 54027541

GI number: 54027541

Start: 5901578

End: 5902795

Strand: Reverse

Name: 54027541

Synonym: nfa55670

Alternate gene names: NA

Gene position: 5902795-5901578 (Counterclockwise)

Preceding gene: 54027544

Following gene: 54027540

Centisome position: 98.03

GC content: 71.1

Gene sequence:

>1218_bases
GTGGCAGGGCGCAGGCGGGGATGGTTCCGGTCCTCGGGGAACACCGAGTGGATCCAGCAGGTCCGAGGCCGCCTCGCGCA
GGCGTTCCTCGACATGGATCGCAGGCAGAGCGCGGCCGAGGCCGCCGTGCACGCGGCCGAGGAGATGTTCCCGCAGCAGC
GGCACGGTGCGGCCTGGGAGCCGGTGCGGGCGCGGTGCTACGCGGCGGCCGAAGCCTATCTGGCGTTGTCGGAGGAACTG
GAGAACGCGGAGCGGACCGGCGCCCAGCCACCGCAGGGCCAGGCCCGCGCCGAGGCGGTGACCAGGCAGTTGGCCGACGC
GGCGGCGGCGGTGGACGGGTTCTATCGCGGCAGGCAGGCCGAGCTCGAGCGGGCGGTGGCGCTGCTGCGTACCGTGCCGC
AGCTGGCGCATCAGGTGAAGGTGGCCGCGGCGGCGGTGCGGCGGGAGGCGGCCGAGTCGGCGTACGCCGGCTACCCCTCG
GTGCGGCAACGCGCGGCCGCAGTGGATGAGGCGCTGCTCACACTGGATGCCCTGGATCCCGGTGCCCAGGCGAGCCGGGT
CAGGGCCGCGGCCAACCGGCTGGAGGCGGCCGCCAAGGAATTGGCAGATGCCTTGGCGCAGGCCCCTTCTCGGGCCGCCG
CCGCCGAGAACGCGCTCGCCTCGGCGAACACCAGGCTGGCCGCCGTGCGCACCCGCGCCGAGGGCCTCGGGCCTGCCTTT
TCGGCGATGCTCCGGGAGTTCAATGCTGCGAGTTCGGCGGATCTGGCGAACAATGAGCGTGAAAGTCAGGCAGCGATGGA
TGCCGCCGCCGACGCCCTGGCCAGGGCGCGCACGGCATTGCGCGAGAACGACCCGGAGACAGCCCTTGATTTGACCTCCA
GTGCGCGGGGCAGCCTCGCCGAGGCCGAGCAGCGGATAGACGCGGTGACCAAACGCCTCGCCCTGCTGCGATCGGTACGT
GACGACCCCGCCGACAAGGCCAAGGCCGTACGATTCCGGCTGCGGGACGCCCAGATGCTCGCGGTCAGCCGGGGACTCGT
CGGCGAATGGGGCTCTGTGCTGGACGCGCAGGCCGAACGCATCGATCGGATCAGCGAAACACTGTCGGGGCGGCACCCCG
ACTACTGGGCCTATGTGACGGAACTGGATGCCGTCACCGAATTCATAGCCGGTGTGGTGGATCGAATGAGAAAGCAATCA
GGACCACGACGACCATGA

Upstream 100 bases:

>100_bases
GAATCGCCGGGTACGCCATACGACAGTAGTAGGTTTCGGGAAACTTGCGTAGGAACTGTGGTAACCACCGGCGAACAGCG
CGATCTCCTACCATCGGGGC

Downstream 100 bases:

>100_bases
GAACGGAGCATCGATGACCGCTCCCGTCGCCCTCCGACAGGAAGTCTCCCTGCGGAAGCGACTGCCGTTGCGCCACTTCC
GGCAGCTGCACGGACCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MAGRRRGWFRSSGNTEWIQQVRGRLAQAFLDMDRRQSAAEAAVHAAEEMFPQQRHGAAWEPVRARCYAAAEAYLALSEEL
ENAERTGAQPPQGQARAEAVTRQLADAAAAVDGFYRGRQAELERAVALLRTVPQLAHQVKVAAAAVRREAAESAYAGYPS
VRQRAAAVDEALLTLDALDPGAQASRVRAAANRLEAAAKELADALAQAPSRAAAAENALASANTRLAAVRTRAEGLGPAF
SAMLREFNAASSADLANNERESQAAMDAAADALARARTALRENDPETALDLTSSARGSLAEAEQRIDAVTKRLALLRSVR
DDPADKAKAVRFRLRDAQMLAVSRGLVGEWGSVLDAQAERIDRISETLSGRHPDYWAYVTELDAVTEFIAGVVDRMRKQS
GPRRP

Sequences:

>Translated_405_residues
MAGRRRGWFRSSGNTEWIQQVRGRLAQAFLDMDRRQSAAEAAVHAAEEMFPQQRHGAAWEPVRARCYAAAEAYLALSEEL
ENAERTGAQPPQGQARAEAVTRQLADAAAAVDGFYRGRQAELERAVALLRTVPQLAHQVKVAAAAVRREAAESAYAGYPS
VRQRAAAVDEALLTLDALDPGAQASRVRAAANRLEAAAKELADALAQAPSRAAAAENALASANTRLAAVRTRAEGLGPAF
SAMLREFNAASSADLANNERESQAAMDAAADALARARTALRENDPETALDLTSSARGSLAEAEQRIDAVTKRLALLRSVR
DDPADKAKAVRFRLRDAQMLAVSRGLVGEWGSVLDAQAERIDRISETLSGRHPDYWAYVTELDAVTEFIAGVVDRMRKQS
GPRRP
>Mature_404_residues
AGRRRGWFRSSGNTEWIQQVRGRLAQAFLDMDRRQSAAEAAVHAAEEMFPQQRHGAAWEPVRARCYAAAEAYLALSEELE
NAERTGAQPPQGQARAEAVTRQLADAAAAVDGFYRGRQAELERAVALLRTVPQLAHQVKVAAAAVRREAAESAYAGYPSV
RQRAAAVDEALLTLDALDPGAQASRVRAAANRLEAAAKELADALAQAPSRAAAAENALASANTRLAAVRTRAEGLGPAFS
AMLREFNAASSADLANNERESQAAMDAAADALARARTALRENDPETALDLTSSARGSLAEAEQRIDAVTKRLALLRSVRD
DPADKAKAVRFRLRDAQMLAVSRGLVGEWGSVLDAQAERIDRISETLSGRHPDYWAYVTELDAVTEFIAGVVDRMRKQSG
PRRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43659; Mature: 43528

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRRRGWFRSSGNTEWIQQVRGRLAQAFLDMDRRQSAAEAAVHAAEEMFPQQRHGAAWE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
PVRARCYAAAEAYLALSEELENAERTGAQPPQGQARAEAVTRQLADAAAAVDGFYRGRQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
ELERAVALLRTVPQLAHQVKVAAAAVRREAAESAYAGYPSVRQRAAAVDEALLTLDALDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
GAQASRVRAAANRLEAAAKELADALAQAPSRAAAAENALASANTRLAAVRTRAEGLGPAF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
SAMLREFNAASSADLANNERESQAAMDAAADALARARTALRENDPETALDLTSSARGSLA
HHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
EAEQRIDAVTKRLALLRSVRDDPADKAKAVRFRLRDAQMLAVSRGLVGEWGSVLDAQAER
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
IDRISETLSGRHPDYWAYVTELDAVTEFIAGVVDRMRKQSGPRRP
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AGRRRGWFRSSGNTEWIQQVRGRLAQAFLDMDRRQSAAEAAVHAAEEMFPQQRHGAAWE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
PVRARCYAAAEAYLALSEELENAERTGAQPPQGQARAEAVTRQLADAAAAVDGFYRGRQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
ELERAVALLRTVPQLAHQVKVAAAAVRREAAESAYAGYPSVRQRAAAVDEALLTLDALDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
GAQASRVRAAANRLEAAAKELADALAQAPSRAAAAENALASANTRLAAVRTRAEGLGPAF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
SAMLREFNAASSADLANNERESQAAMDAAADALARARTALRENDPETALDLTSSARGSLA
HHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
EAEQRIDAVTKRLALLRSVRDDPADKAKAVRFRLRDAQMLAVSRGLVGEWGSVLDAQAER
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
IDRISETLSGRHPDYWAYVTELDAVTEFIAGVVDRMRKQSGPRRP
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA