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The map label for this gene is 54027400

Identifier: 54027400

GI number: 54027400

Start: 5742987

End: 5744270

Strand: Reverse

Name: 54027400

Synonym: nfa54260

Alternate gene names: NA

Gene position: 5744270-5742987 (Counterclockwise)

Preceding gene: 54027401

Following gene: 54027397

Centisome position: 95.4

GC content: 70.33

Gene sequence:

>1284_bases
GTGAGCGACCACCACCACCATCACCACCACGACCATTCCGAACCGCTCGCGATCGGCGCCACCGCCGCCCGCGTGGTGAT
CGGGCTACTGACGGTCATCGGCTTCGTCACCCTGCTCGCCACCGTGCTGCTGTGGCCGCAGCGCCAGCAGATCGACATTC
CGCTGCCCATGCAGAACGCCGGCGGTGGGGCGGTGGAAACCGAGGCGGGCACGGTGCTCGCGCACGACGTCGGGCCGTGC
GGCAGTCCGTCCATCGGCCGGGTCTTCGCCGACAAGCCCGAGGCGCCCCGCAACGACGCCTACTCCTGCGAGCGCAGTCT
CATCGCCATCGAGTCGGGGCCGCACGAGGGCAACCGCACCCTACTCGAAATCGCCCCCGGCCCAGGGCAACCCTCGCTCG
CCGAGGGCGACGAGATCCGCATCGTGCGCCAGACCGACCCCTACGGCACCCCGATGTACTCCTTCGACGACTACGCCCGC
GGCCTGCCGTTGACGTTGATCGCGTTGGCGTTCGTGATCGTGGTCGTGGTCGTCGCCCGCTGGCGGGGGGTGCGGGCGCT
GCTCGGGCTGGTCTTCGCCTTCGGCGTCCTGGTGATCTTCCTGCTGCCCGCGCTGCTCGACGGGAAACCGGCGATCCCGG
TCGCGCTGGTCTCGGGCTCGCTGATCCTCTATGCCGTGCTCTATCTCGCGCACGGGGTGAACCTGCGCACCTCCTCGGCG
TTGCTCGGCACGCTGACCTCGATGGTGCTCGCCGCGGTGCTGTCCTGGGTGGCGATCGAGGCCACCAAGCTCACCGGCCT
GTCGGAGGAGCAGAACACCAACGTCGCCACCTACATCCAGCACGTCTCGATCACCGGATTGCTGCTGGCCGGGTTCATCA
TCGGCTCGCTCGGTGTGCTCAACGACGTCACCATCACCCAGGCCTCGGCGGCCTTCGAACTCGCCGCCCTGGACGAAGGC
GCTTCCCGCCGTGAGGTTTTCGCCGCCGCCATGCGAGTCGGGCGTGACCACATCGCCAGCACCGTCTACACCCTCGTGCT
CGCCTACGCCGGCGGCGCCCTGCCGCTGCTGCTGCTGTTCAGCGTGGCGGGGCGCTCCATCCGGGACGTGCTCGTCGGCG
ACGCGGTGGCTATCGAGATCGCCCGCTCGGCGGTCGGCGGTATCGCGCTGACCCTCTCGGTGCCGTTGACCACCGGTATC
GCCGTGCTGCTCGCCCGGCCCTTCGGCAGCCGGCGCGAACCCGCACCCGCGCCGCGCCACGGACGCCACGCGCGCGGAGC
CTGA

Upstream 100 bases:

>100_bases
ATCCTTTAAGCTCGGCACCGCGCAGCTTCCCGGGACGACGTCAGCATCCTGCCCACCGGCACGAACGGCTCCCGGGACAC
CACGGACAGGTAGGAGCCCG

Downstream 100 bases:

>100_bases
GCGGACGCGGCGGGTGCCCGCCGCCGCCGATCAGCGCGGTGGCGGCGGGAAGGGGAAGGCTTCCGGCGGGATGGTCGGAA
TCACGATCGGCGGCAGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: YibE/F-Like Protein; Integral Membrane Protein; Multitransmembrane Protein; YibE/F-Like Family Protein

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSDHHHHHHHDHSEPLAIGATAARVVIGLLTVIGFVTLLATVLLWPQRQQIDIPLPMQNAGGGAVETEAGTVLAHDVGPC
GSPSIGRVFADKPEAPRNDAYSCERSLIAIESGPHEGNRTLLEIAPGPGQPSLAEGDEIRIVRQTDPYGTPMYSFDDYAR
GLPLTLIALAFVIVVVVVARWRGVRALLGLVFAFGVLVIFLLPALLDGKPAIPVALVSGSLILYAVLYLAHGVNLRTSSA
LLGTLTSMVLAAVLSWVAIEATKLTGLSEEQNTNVATYIQHVSITGLLLAGFIIGSLGVLNDVTITQASAAFELAALDEG
ASRREVFAAAMRVGRDHIASTVYTLVLAYAGGALPLLLLFSVAGRSIRDVLVGDAVAIEIARSAVGGIALTLSVPLTTGI
AVLLARPFGSRREPAPAPRHGRHARGA

Sequences:

>Translated_427_residues
MSDHHHHHHHDHSEPLAIGATAARVVIGLLTVIGFVTLLATVLLWPQRQQIDIPLPMQNAGGGAVETEAGTVLAHDVGPC
GSPSIGRVFADKPEAPRNDAYSCERSLIAIESGPHEGNRTLLEIAPGPGQPSLAEGDEIRIVRQTDPYGTPMYSFDDYAR
GLPLTLIALAFVIVVVVVARWRGVRALLGLVFAFGVLVIFLLPALLDGKPAIPVALVSGSLILYAVLYLAHGVNLRTSSA
LLGTLTSMVLAAVLSWVAIEATKLTGLSEEQNTNVATYIQHVSITGLLLAGFIIGSLGVLNDVTITQASAAFELAALDEG
ASRREVFAAAMRVGRDHIASTVYTLVLAYAGGALPLLLLFSVAGRSIRDVLVGDAVAIEIARSAVGGIALTLSVPLTTGI
AVLLARPFGSRREPAPAPRHGRHARGA
>Mature_426_residues
SDHHHHHHHDHSEPLAIGATAARVVIGLLTVIGFVTLLATVLLWPQRQQIDIPLPMQNAGGGAVETEAGTVLAHDVGPCG
SPSIGRVFADKPEAPRNDAYSCERSLIAIESGPHEGNRTLLEIAPGPGQPSLAEGDEIRIVRQTDPYGTPMYSFDDYARG
LPLTLIALAFVIVVVVVARWRGVRALLGLVFAFGVLVIFLLPALLDGKPAIPVALVSGSLILYAVLYLAHGVNLRTSSAL
LGTLTSMVLAAVLSWVAIEATKLTGLSEEQNTNVATYIQHVSITGLLLAGFIIGSLGVLNDVTITQASAAFELAALDEGA
SRREVFAAAMRVGRDHIASTVYTLVLAYAGGALPLLLLFSVAGRSIRDVLVGDAVAIEIARSAVGGIALTLSVPLTTGIA
VLLARPFGSRREPAPAPRHGRHARGA

Specific function: Unknown

COG id: COG5438

COG function: function code S; Predicted multitransmembrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44774; Mature: 44642

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDHHHHHHHDHSEPLAIGATAARVVIGLLTVIGFVTLLATVLLWPQRQQIDIPLPMQNA
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GGGAVETEAGTVLAHDVGPCGSPSIGRVFADKPEAPRNDAYSCERSLIAIESGPHEGNRT
CCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCE
LLEIAPGPGQPSLAEGDEIRIVRQTDPYGTPMYSFDDYARGLPLTLIALAFVIVVVVVAR
EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
WRGVRALLGLVFAFGVLVIFLLPALLDGKPAIPVALVSGSLILYAVLYLAHGVNLRTSSA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
LLGTLTSMVLAAVLSWVAIEATKLTGLSEEQNTNVATYIQHVSITGLLLAGFIIGSLGVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NDVTITQASAAFELAALDEGASRREVFAAAMRVGRDHIASTVYTLVLAYAGGALPLLLLF
CCCEEEHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SVAGRSIRDVLVGDAVAIEIARSAVGGIALTLSVPLTTGIAVLLARPFGSRREPAPAPRH
HHCCCHHHHHHHCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCC
GRHARGA
CCCCCCC
>Mature Secondary Structure 
SDHHHHHHHDHSEPLAIGATAARVVIGLLTVIGFVTLLATVLLWPQRQQIDIPLPMQNA
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GGGAVETEAGTVLAHDVGPCGSPSIGRVFADKPEAPRNDAYSCERSLIAIESGPHEGNRT
CCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCE
LLEIAPGPGQPSLAEGDEIRIVRQTDPYGTPMYSFDDYARGLPLTLIALAFVIVVVVVAR
EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
WRGVRALLGLVFAFGVLVIFLLPALLDGKPAIPVALVSGSLILYAVLYLAHGVNLRTSSA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
LLGTLTSMVLAAVLSWVAIEATKLTGLSEEQNTNVATYIQHVSITGLLLAGFIIGSLGVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NDVTITQASAAFELAALDEGASRREVFAAAMRVGRDHIASTVYTLVLAYAGGALPLLLLF
CCCEEEHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SVAGRSIRDVLVGDAVAIEIARSAVGGIALTLSVPLTTGIAVLLARPFGSRREPAPAPRH
HHCCCHHHHHHHCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCC
GRHARGA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA