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The map label for this gene is 54027397

Identifier: 54027397

GI number: 54027397

Start: 5739405

End: 5739941

Strand: Reverse

Name: 54027397

Synonym: nfa54230

Alternate gene names: NA

Gene position: 5739941-5739405 (Counterclockwise)

Preceding gene: 54027400

Following gene: 54027396

Centisome position: 95.33

GC content: 70.58

Gene sequence:

>537_bases
ATGCGGAATCGTCGTTTCGTCGTGGTGCTCGGTGGTGTGCTGGTCGTGCTCGCCGTCGCGGTGGCGGCGCTGTGGCCGGT
GTACGTGCGGCCGCGGACCGACGCGCCCGCGCCCGCCGACGCGATCCTGGTGCTCGGCGGCGCCCACGACGGGCGCGAGG
AACTGGGCCTGCGGCTGGCCCGCGACGGGTACGCACCGCGCGTGCTGTTCTCCGACCCGTACGAGTACAGCGCCCGGATG
AACCGCATCTGTCACGGCGGCTACCGCTTCGAGGTGATCTGCTTCGACCCCGACCCGCGCACCACCCGCGGGGAGGGCCG
GGAACTGGCGCGCCGCGCCCGCGCCGAGGGCTGGCAGCGCGTCATCGTCGTCACCTTCACCCCGCACATCTCCCGTGCCC
GCTACATCATCGGCAAATGCTGGGACGGCGAACTCCTCTTCGTCGATCCCCGCCCCGCCCTCTCGATTCCCCGCTGGGCC
TACGACTACCTCTACCAATCCGCCGCCTACCTGGAAGCCTTCTTCGAAGACTGCTGA

Upstream 100 bases:

>100_bases
ACGGCAACATTGGATGTACAGGCGGAAACAACCAGTTCAGGGCGGTGTCGCCCCGGCGAAGGCCGATACTCGGGGGACGG
CGCGGCTTAGCATCGCAGCG

Downstream 100 bases:

>100_bases
GCGGCCGCGTGGTGCGCCCCGGCGGCGGGCGCGTGCGCGCCTAACTGCTGGCGTGTGGCATCAGTTTGATTTCGGCTGGC
CGGGGGCTTAGATTGGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRNRRFVVVLGGVLVVLAVAVAALWPVYVRPRTDAPAPADAILVLGGAHDGREELGLRLARDGYAPRVLFSDPYEYSARM
NRICHGGYRFEVICFDPDPRTTRGEGRELARRARAEGWQRVIVVTFTPHISRARYIIGKCWDGELLFVDPRPALSIPRWA
YDYLYQSAAYLEAFFEDC

Sequences:

>Translated_178_residues
MRNRRFVVVLGGVLVVLAVAVAALWPVYVRPRTDAPAPADAILVLGGAHDGREELGLRLARDGYAPRVLFSDPYEYSARM
NRICHGGYRFEVICFDPDPRTTRGEGRELARRARAEGWQRVIVVTFTPHISRARYIIGKCWDGELLFVDPRPALSIPRWA
YDYLYQSAAYLEAFFEDC
>Mature_178_residues
MRNRRFVVVLGGVLVVLAVAVAALWPVYVRPRTDAPAPADAILVLGGAHDGREELGLRLARDGYAPRVLFSDPYEYSARM
NRICHGGYRFEVICFDPDPRTTRGEGRELARRARAEGWQRVIVVTFTPHISRARYIIGKCWDGELLFVDPRPALSIPRWA
YDYLYQSAAYLEAFFEDC

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20219; Mature: 20219

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRRFVVVLGGVLVVLAVAVAALWPVYVRPRTDAPAPADAILVLGGAHDGREELGLRLA
CCCCEEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCCCCHHHHCEEEE
RDGYAPRVLFSDPYEYSARMNRICHGGYRFEVICFDPDPRTTRGEGRELARRARAEGWQR
CCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEE
VIVVTFTPHISRARYIIGKCWDGELLFVDPRPALSIPRWAYDYLYQSAAYLEAFFEDC
EEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRNRRFVVVLGGVLVVLAVAVAALWPVYVRPRTDAPAPADAILVLGGAHDGREELGLRLA
CCCCEEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCCCCHHHHCEEEE
RDGYAPRVLFSDPYEYSARMNRICHGGYRFEVICFDPDPRTTRGEGRELARRARAEGWQR
CCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEE
VIVVTFTPHISRARYIIGKCWDGELLFVDPRPALSIPRWAYDYLYQSAAYLEAFFEDC
EEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA