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The map label for this gene is 54027393

Identifier: 54027393

GI number: 54027393

Start: 5732180

End: 5732857

Strand: Reverse

Name: 54027393

Synonym: nfa54190

Alternate gene names: NA

Gene position: 5732857-5732180 (Counterclockwise)

Preceding gene: 54027395

Following gene: 54027385

Centisome position: 95.21

GC content: 66.52

Gene sequence:

>678_bases
ATGACTGTGGGTGCGGGCGCTGTGCACGCCGAACCGGCGCCCGCGGCTCCCGAGCCCATCGACTACTCGGTCAAGCTGGT
CGACAAGACGATCGTCACGACGCTGCGTGGGGGGACCTTCTCGCTGGTCGAGAAGGAAGAGGACGGCGCAGCCGTCGACG
CGGCAACCGACCAGGCCGCCGAGCCCGAGGCGATCGATGTCGCCGAGATCAAGGACGCCAGCGGTAACACCGTGCTCGAG
CTGCCGCTCGTGTTCAACGTGCTCGGCACCGAGATTCCGGTGAAGCCGGAGCTGAAGAACGACGGCACCGTTCTCGAGAT
CACTCCCGAGAAGCCCGCCGGCATCGTCCTCGACAAGCCGCTGGCCGTCAAGCCGGTCGCGTCCTCGATCGAGAACCAGC
GGGCGCAGAACGACTTCGCCAGCAAGTTCGGTATCGGCACCGCGATCGGCGGCTTTGTCGGTACCGCGATCGGAGCCGTC
ATCGGCTGCGTCGCCACGCTTCCGGTTTGCATTCCCGGCCTGGTCACGGGTGCGAGTGTCGGCGGGATCCTTGGCACGAT
CGCAGTCGGCGGTCCGACCCTGGTAGCGGCTGGCATCGACCTGATTCAAACGCTGCAGGCGCCGGAGAACACAACCAAGT
GGGCCGACAAGCCCAAGGAGGCGCAGGCGACCAAGTAG

Upstream 100 bases:

>100_bases
CGCGGGACGACGGCCATTGCGAACACAGCCCGAGGATGGATTGGACACTGAATTGAATCTCCGCAGAAGCGCCATTGCCG
CTGCGTTGGTCATCGGCGCG

Downstream 100 bases:

>100_bases
TCGCCCCGATTCCCGCGAACGGCCCGCTCTTCGGAGCGGGCCGTTCGTCGTTTCGGAATTCCTCAGTCGGCCACAACCAT
TCGGCCGGTGAACGACACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTVGAGAVHAEPAPAAPEPIDYSVKLVDKTIVTTLRGGTFSLVEKEEDGAAVDAATDQAAEPEAIDVAEIKDASGNTVLE
LPLVFNVLGTEIPVKPELKNDGTVLEITPEKPAGIVLDKPLAVKPVASSIENQRAQNDFASKFGIGTAIGGFVGTAIGAV
IGCVATLPVCIPGLVTGASVGGILGTIAVGGPTLVAAGIDLIQTLQAPENTTKWADKPKEAQATK

Sequences:

>Translated_225_residues
MTVGAGAVHAEPAPAAPEPIDYSVKLVDKTIVTTLRGGTFSLVEKEEDGAAVDAATDQAAEPEAIDVAEIKDASGNTVLE
LPLVFNVLGTEIPVKPELKNDGTVLEITPEKPAGIVLDKPLAVKPVASSIENQRAQNDFASKFGIGTAIGGFVGTAIGAV
IGCVATLPVCIPGLVTGASVGGILGTIAVGGPTLVAAGIDLIQTLQAPENTTKWADKPKEAQATK
>Mature_224_residues
TVGAGAVHAEPAPAAPEPIDYSVKLVDKTIVTTLRGGTFSLVEKEEDGAAVDAATDQAAEPEAIDVAEIKDASGNTVLEL
PLVFNVLGTEIPVKPELKNDGTVLEITPEKPAGIVLDKPLAVKPVASSIENQRAQNDFASKFGIGTAIGGFVGTAIGAVI
GCVATLPVCIPGLVTGASVGGILGTIAVGGPTLVAAGIDLIQTLQAPENTTKWADKPKEAQATK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22738; Mature: 22607

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGAGAVHAEPAPAAPEPIDYSVKLVDKTIVTTLRGGTFSLVEKEEDGAAVDAATDQAA
CCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCC
EPEAIDVAEIKDASGNTVLELPLVFNVLGTEIPVKPELKNDGTVLEITPEKPAGIVLDKP
CCCCEEHHHHCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEECCC
LAVKPVASSIENQRAQNDFASKFGIGTAIGGFVGTAIGAVIGCVATLPVCIPGLVTGASV
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
GGILGTIAVGGPTLVAAGIDLIQTLQAPENTTKWADKPKEAQATK
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure 
TVGAGAVHAEPAPAAPEPIDYSVKLVDKTIVTTLRGGTFSLVEKEEDGAAVDAATDQAA
CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCC
EPEAIDVAEIKDASGNTVLELPLVFNVLGTEIPVKPELKNDGTVLEITPEKPAGIVLDKP
CCCCEEHHHHCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEECCC
LAVKPVASSIENQRAQNDFASKFGIGTAIGGFVGTAIGAVIGCVATLPVCIPGLVTGASV
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
GGILGTIAVGGPTLVAAGIDLIQTLQAPENTTKWADKPKEAQATK
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA