| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is mshA
Identifier: 54027166
GI number: 54027166
Start: 5490079
End: 5491434
Strand: Reverse
Name: mshA
Synonym: nfa51920
Alternate gene names: 54027166
Gene position: 5491434-5490079 (Counterclockwise)
Preceding gene: 54027167
Following gene: 54027165
Centisome position: 91.2
GC content: 73.38
Gene sequence:
>1356_bases ATGGATGGTGTGAGTCAGCGTGTGGACCAACGGCCGAACCGGATCGCGGTGTTGTCGGTGCACACCTCCCCGCTGGCCCA GCCGGGCACCGGTGACGCGGGCGGGATGAACGTCTACGTGCTGCGTACGGCTGTCGAGCTGGCCCAGCGCGGCATCGAAG TGGAGATCTTCACCCGGGCCACCGCCTCGCACATCCCGCCGGTGCAGGAGGCGGCCCCGGGCGTGCTGGTGCGCAACGTG GTCGCCGGTCCGTTCGAGGGACTCGACAAGCAGGACCTGCCCACCCAGCTGTGCCCGTTCACCGCGGAGGTGCTGCGGCA GGAGGCCAGGCAACTGCCCGGCTACTACGACCTGGTGCATTCGCACTACTGGCTGTCCGGCCAGGTCGGCTGGCTGACCC GGGACCGCTGGCGGGTGCCGCTGGTGCACACCGCCCACACGCTGGCCGCGGTGAAGAACGCCGCGCTCGCCGAGGGCGAC GCCCCCGAGCCGGTGAGCCGCGAGATCGGCGAGAAACAGATCATCGCCGAGGCCGACCGGATGGTGGCCAACACCGCCGA GGAGGCGCGCCAGCTCGTCGAGTTGTACGGCGCCGACCGCGACCGGATCGACGTGGTACCGCCCGGCGCCGACCTGACCC GCTACCGCCCCGGCGACCGCGCGGCCGCCCGCGCCGAACTCGGCCTGGCGCCCGGGGAGCCGATCGTGGCGTTCGTCGGC CGCATCCAGCCGCTGAAGGCACCCGACGTGCTGGTACGCGCGGCGGCGGAGTTGCTGCGCCGCGACCCCGGCCGCGCCCT GCGGGTGTTGATCGTCGGCGGCCCGTCCGGCTCCGGGTTGCAGCGGCCGGACGCGCTGATCGAACTGGCCGCCGAACTCG GTATCAGCGAGCGGGTCACCTTCCTGCCGCCGCAGCCGCCCGAACGGCTGGTGCAGGTGTATCGCGCCGCCGACCTGGTC GCGGTGCCCAGCTACAGCGAGTCCTTCGGCCTGGTCGCCATCGAGGCGCAGGCCAGCGGCACTCCGGTGCTGGCCGCCGA CGTCGGCGGGCTGAGCACCGCCGTGCGCGACGGTGCGACCGGTCTGCTGGTGCGCGGGCACGAGACCGCCGACTGGGCCG ACGCCCTCGGTGCGCTGCTCGGCGATCGGGACCGGTTGCGCCGCATGGGTCTTCGTGCGGTCGCGCACGCCGCGGGCTTC TCCTGGGCGCACACCGCCGAAGGACTGCTGGAGAGTTATTCCGCCGCGCTCTGGGAATTCCACGGTGCGCGCGCCGGCGT CGGCGCGGGCCGGATGACGCCGAACCAGGCCAGATCGCGGGCGCTGTGGCGGCGCCGGATGGGAGTGCGCCGATGA
Upstream 100 bases:
>100_bases CCGCGAGTTCGTCGACGGGCTGTAGCCCGCGGGCAACGCTATGTGATAGCGGTCACTCGCCCGGTGGCGGGGCAATCGAG CGTGGAAGTGGGCGTGCACT
Downstream 100 bases:
>100_bases GCGAGATCACCGACACCGCGGAGGTCATCGACCGGACCCTGCGCGAGCGCGAGATCGAGTACACCCGGCCCGGCGACGAC GTCTTCGTCGTCGTGCTGCC
Product: putative glycosyltransferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MDGVSQRVDQRPNRIAVLSVHTSPLAQPGTGDAGGMNVYVLRTAVELAQRGIEVEIFTRATASHIPPVQEAAPGVLVRNV VAGPFEGLDKQDLPTQLCPFTAEVLRQEARQLPGYYDLVHSHYWLSGQVGWLTRDRWRVPLVHTAHTLAAVKNAALAEGD APEPVSREIGEKQIIAEADRMVANTAEEARQLVELYGADRDRIDVVPPGADLTRYRPGDRAAARAELGLAPGEPIVAFVG RIQPLKAPDVLVRAAAELLRRDPGRALRVLIVGGPSGSGLQRPDALIELAAELGISERVTFLPPQPPERLVQVYRAADLV AVPSYSESFGLVAIEAQASGTPVLAADVGGLSTAVRDGATGLLVRGHETADWADALGALLGDRDRLRRMGLRAVAHAAGF SWAHTAEGLLESYSAALWEFHGARAGVGAGRMTPNQARSRALWRRRMGVRR
Sequences:
>Translated_451_residues MDGVSQRVDQRPNRIAVLSVHTSPLAQPGTGDAGGMNVYVLRTAVELAQRGIEVEIFTRATASHIPPVQEAAPGVLVRNV VAGPFEGLDKQDLPTQLCPFTAEVLRQEARQLPGYYDLVHSHYWLSGQVGWLTRDRWRVPLVHTAHTLAAVKNAALAEGD APEPVSREIGEKQIIAEADRMVANTAEEARQLVELYGADRDRIDVVPPGADLTRYRPGDRAAARAELGLAPGEPIVAFVG RIQPLKAPDVLVRAAAELLRRDPGRALRVLIVGGPSGSGLQRPDALIELAAELGISERVTFLPPQPPERLVQVYRAADLV AVPSYSESFGLVAIEAQASGTPVLAADVGGLSTAVRDGATGLLVRGHETADWADALGALLGDRDRLRRMGLRAVAHAAGF SWAHTAEGLLESYSAALWEFHGARAGVGAGRMTPNQARSRALWRRRMGVRR >Mature_451_residues MDGVSQRVDQRPNRIAVLSVHTSPLAQPGTGDAGGMNVYVLRTAVELAQRGIEVEIFTRATASHIPPVQEAAPGVLVRNV VAGPFEGLDKQDLPTQLCPFTAEVLRQEARQLPGYYDLVHSHYWLSGQVGWLTRDRWRVPLVHTAHTLAAVKNAALAEGD APEPVSREIGEKQIIAEADRMVANTAEEARQLVELYGADRDRIDVVPPGADLTRYRPGDRAAARAELGLAPGEPIVAFVG RIQPLKAPDVLVRAAAELLRRDPGRALRVLIVGGPSGSGLQRPDALIELAAELGISERVTFLPPQPPERLVQVYRAADLV AVPSYSESFGLVAIEAQASGTPVLAADVGGLSTAVRDGATGLLVRGHETADWADALGALLGDRDRLRRMGLRAVAHAAGF SWAHTAEGLLESYSAALWEFHGARAGVGAGRMTPNQARSRALWRRRMGVRR
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MSHA_NOCFA (Q5YP47)
Other databases:
- EMBL: AP006618 - RefSeq: YP_121408.1 - ProteinModelPortal: Q5YP47 - SMR: Q5YP47 - GeneID: 3110758 - GenomeReviews: AP006618_GR - KEGG: nfa:nfa51920 - NMPDR: fig|247156.1.peg.4989 - HOGENOM: HBG726846 - OMA: PLKAPDV - ProtClustDB: CLSK2298442 - BioCyc: NFAR247156:NFA51920-MONOMER - HAMAP: MF_01695 - InterPro: IPR001296 - InterPro: IPR017814 - TIGRFAMs: TIGR03449
Pfam domain/function: PF00534 Glycos_transf_1
EC number: =2.4.1.250
Molecular weight: Translated: 48435; Mature: 48435
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: BINDING 21-21 BINDING 35-35 BINDING 90-90 BINDING 123-123 BINDING 147-147 BINDING 167-167 BINDING 241-241 BINDING 246-246 BINDING 305-305 BINDING 327-327 BINDING 335-335
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGVSQRVDQRPNRIAVLSVHTSPLAQPGTGDAGGMNVYVLRTAVELAQRGIEVEIFTRA CCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEECC TASHIPPVQEAAPGVLVRNVVAGPFEGLDKQDLPTQLCPFTAEVLRQEARQLPGYYDLVH HHHCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH SHYWLSGQVGWLTRDRWRVPLVHTAHTLAAVKNAALAEGDAPEPVSREIGEKQIIAEADR CCEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHH MVANTAEEARQLVELYGADRDRIDVVPPGADLTRYRPGDRAAARAELGLAPGEPIVAFVG HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHC RIQPLKAPDVLVRAAAELLRRDPGRALRVLIVGGPSGSGLQRPDALIELAAELGISERVT CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEE FLPPQPPERLVQVYRAADLVAVPSYSESFGLVAIEAQASGTPVLAADVGGLSTAVRDGAT ECCCCCHHHHHHHHHHHCEEECCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHCCCC GLLVRGHETADWADALGALLGDRDRLRRMGLRAVAHAAGFSWAHTAEGLLESYSAALWEF EEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH HGARAGVGAGRMTPNQARSRALWRRRMGVRR CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDGVSQRVDQRPNRIAVLSVHTSPLAQPGTGDAGGMNVYVLRTAVELAQRGIEVEIFTRA CCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEECC TASHIPPVQEAAPGVLVRNVVAGPFEGLDKQDLPTQLCPFTAEVLRQEARQLPGYYDLVH HHHCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH SHYWLSGQVGWLTRDRWRVPLVHTAHTLAAVKNAALAEGDAPEPVSREIGEKQIIAEADR CCEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHH MVANTAEEARQLVELYGADRDRIDVVPPGADLTRYRPGDRAAARAELGLAPGEPIVAFVG HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHC RIQPLKAPDVLVRAAAELLRRDPGRALRVLIVGGPSGSGLQRPDALIELAAELGISERVT CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEE FLPPQPPERLVQVYRAADLVAVPSYSESFGLVAIEAQASGTPVLAADVGGLSTAVRDGAT ECCCCCHHHHHHHHHHHCEEECCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHCCCC GLLVRGHETADWADALGALLGDRDRLRRMGLRAVAHAAGFSWAHTAEGLLESYSAALWEF EEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH HGARAGVGAGRMTPNQARSRALWRRRMGVRR CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA