Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is mshA

Identifier: 54027166

GI number: 54027166

Start: 5490079

End: 5491434

Strand: Reverse

Name: mshA

Synonym: nfa51920

Alternate gene names: 54027166

Gene position: 5491434-5490079 (Counterclockwise)

Preceding gene: 54027167

Following gene: 54027165

Centisome position: 91.2

GC content: 73.38

Gene sequence:

>1356_bases
ATGGATGGTGTGAGTCAGCGTGTGGACCAACGGCCGAACCGGATCGCGGTGTTGTCGGTGCACACCTCCCCGCTGGCCCA
GCCGGGCACCGGTGACGCGGGCGGGATGAACGTCTACGTGCTGCGTACGGCTGTCGAGCTGGCCCAGCGCGGCATCGAAG
TGGAGATCTTCACCCGGGCCACCGCCTCGCACATCCCGCCGGTGCAGGAGGCGGCCCCGGGCGTGCTGGTGCGCAACGTG
GTCGCCGGTCCGTTCGAGGGACTCGACAAGCAGGACCTGCCCACCCAGCTGTGCCCGTTCACCGCGGAGGTGCTGCGGCA
GGAGGCCAGGCAACTGCCCGGCTACTACGACCTGGTGCATTCGCACTACTGGCTGTCCGGCCAGGTCGGCTGGCTGACCC
GGGACCGCTGGCGGGTGCCGCTGGTGCACACCGCCCACACGCTGGCCGCGGTGAAGAACGCCGCGCTCGCCGAGGGCGAC
GCCCCCGAGCCGGTGAGCCGCGAGATCGGCGAGAAACAGATCATCGCCGAGGCCGACCGGATGGTGGCCAACACCGCCGA
GGAGGCGCGCCAGCTCGTCGAGTTGTACGGCGCCGACCGCGACCGGATCGACGTGGTACCGCCCGGCGCCGACCTGACCC
GCTACCGCCCCGGCGACCGCGCGGCCGCCCGCGCCGAACTCGGCCTGGCGCCCGGGGAGCCGATCGTGGCGTTCGTCGGC
CGCATCCAGCCGCTGAAGGCACCCGACGTGCTGGTACGCGCGGCGGCGGAGTTGCTGCGCCGCGACCCCGGCCGCGCCCT
GCGGGTGTTGATCGTCGGCGGCCCGTCCGGCTCCGGGTTGCAGCGGCCGGACGCGCTGATCGAACTGGCCGCCGAACTCG
GTATCAGCGAGCGGGTCACCTTCCTGCCGCCGCAGCCGCCCGAACGGCTGGTGCAGGTGTATCGCGCCGCCGACCTGGTC
GCGGTGCCCAGCTACAGCGAGTCCTTCGGCCTGGTCGCCATCGAGGCGCAGGCCAGCGGCACTCCGGTGCTGGCCGCCGA
CGTCGGCGGGCTGAGCACCGCCGTGCGCGACGGTGCGACCGGTCTGCTGGTGCGCGGGCACGAGACCGCCGACTGGGCCG
ACGCCCTCGGTGCGCTGCTCGGCGATCGGGACCGGTTGCGCCGCATGGGTCTTCGTGCGGTCGCGCACGCCGCGGGCTTC
TCCTGGGCGCACACCGCCGAAGGACTGCTGGAGAGTTATTCCGCCGCGCTCTGGGAATTCCACGGTGCGCGCGCCGGCGT
CGGCGCGGGCCGGATGACGCCGAACCAGGCCAGATCGCGGGCGCTGTGGCGGCGCCGGATGGGAGTGCGCCGATGA

Upstream 100 bases:

>100_bases
CCGCGAGTTCGTCGACGGGCTGTAGCCCGCGGGCAACGCTATGTGATAGCGGTCACTCGCCCGGTGGCGGGGCAATCGAG
CGTGGAAGTGGGCGTGCACT

Downstream 100 bases:

>100_bases
GCGAGATCACCGACACCGCGGAGGTCATCGACCGGACCCTGCGCGAGCGCGAGATCGAGTACACCCGGCCCGGCGACGAC
GTCTTCGTCGTCGTGCTGCC

Product: putative glycosyltransferase

Products: NA

Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MDGVSQRVDQRPNRIAVLSVHTSPLAQPGTGDAGGMNVYVLRTAVELAQRGIEVEIFTRATASHIPPVQEAAPGVLVRNV
VAGPFEGLDKQDLPTQLCPFTAEVLRQEARQLPGYYDLVHSHYWLSGQVGWLTRDRWRVPLVHTAHTLAAVKNAALAEGD
APEPVSREIGEKQIIAEADRMVANTAEEARQLVELYGADRDRIDVVPPGADLTRYRPGDRAAARAELGLAPGEPIVAFVG
RIQPLKAPDVLVRAAAELLRRDPGRALRVLIVGGPSGSGLQRPDALIELAAELGISERVTFLPPQPPERLVQVYRAADLV
AVPSYSESFGLVAIEAQASGTPVLAADVGGLSTAVRDGATGLLVRGHETADWADALGALLGDRDRLRRMGLRAVAHAAGF
SWAHTAEGLLESYSAALWEFHGARAGVGAGRMTPNQARSRALWRRRMGVRR

Sequences:

>Translated_451_residues
MDGVSQRVDQRPNRIAVLSVHTSPLAQPGTGDAGGMNVYVLRTAVELAQRGIEVEIFTRATASHIPPVQEAAPGVLVRNV
VAGPFEGLDKQDLPTQLCPFTAEVLRQEARQLPGYYDLVHSHYWLSGQVGWLTRDRWRVPLVHTAHTLAAVKNAALAEGD
APEPVSREIGEKQIIAEADRMVANTAEEARQLVELYGADRDRIDVVPPGADLTRYRPGDRAAARAELGLAPGEPIVAFVG
RIQPLKAPDVLVRAAAELLRRDPGRALRVLIVGGPSGSGLQRPDALIELAAELGISERVTFLPPQPPERLVQVYRAADLV
AVPSYSESFGLVAIEAQASGTPVLAADVGGLSTAVRDGATGLLVRGHETADWADALGALLGDRDRLRRMGLRAVAHAAGF
SWAHTAEGLLESYSAALWEFHGARAGVGAGRMTPNQARSRALWRRRMGVRR
>Mature_451_residues
MDGVSQRVDQRPNRIAVLSVHTSPLAQPGTGDAGGMNVYVLRTAVELAQRGIEVEIFTRATASHIPPVQEAAPGVLVRNV
VAGPFEGLDKQDLPTQLCPFTAEVLRQEARQLPGYYDLVHSHYWLSGQVGWLTRDRWRVPLVHTAHTLAAVKNAALAEGD
APEPVSREIGEKQIIAEADRMVANTAEEARQLVELYGADRDRIDVVPPGADLTRYRPGDRAAARAELGLAPGEPIVAFVG
RIQPLKAPDVLVRAAAELLRRDPGRALRVLIVGGPSGSGLQRPDALIELAAELGISERVTFLPPQPPERLVQVYRAADLV
AVPSYSESFGLVAIEAQASGTPVLAADVGGLSTAVRDGATGLLVRGHETADWADALGALLGDRDRLRRMGLRAVAHAAGF
SWAHTAEGLLESYSAALWEFHGARAGVGAGRMTPNQARSRALWRRRMGVRR

Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MSHA_NOCFA (Q5YP47)

Other databases:

- EMBL:   AP006618
- RefSeq:   YP_121408.1
- ProteinModelPortal:   Q5YP47
- SMR:   Q5YP47
- GeneID:   3110758
- GenomeReviews:   AP006618_GR
- KEGG:   nfa:nfa51920
- NMPDR:   fig|247156.1.peg.4989
- HOGENOM:   HBG726846
- OMA:   PLKAPDV
- ProtClustDB:   CLSK2298442
- BioCyc:   NFAR247156:NFA51920-MONOMER
- HAMAP:   MF_01695
- InterPro:   IPR001296
- InterPro:   IPR017814
- TIGRFAMs:   TIGR03449

Pfam domain/function: PF00534 Glycos_transf_1

EC number: =2.4.1.250

Molecular weight: Translated: 48435; Mature: 48435

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: BINDING 21-21 BINDING 35-35 BINDING 90-90 BINDING 123-123 BINDING 147-147 BINDING 167-167 BINDING 241-241 BINDING 246-246 BINDING 305-305 BINDING 327-327 BINDING 335-335

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGVSQRVDQRPNRIAVLSVHTSPLAQPGTGDAGGMNVYVLRTAVELAQRGIEVEIFTRA
CCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEECC
TASHIPPVQEAAPGVLVRNVVAGPFEGLDKQDLPTQLCPFTAEVLRQEARQLPGYYDLVH
HHHCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
SHYWLSGQVGWLTRDRWRVPLVHTAHTLAAVKNAALAEGDAPEPVSREIGEKQIIAEADR
CCEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHH
MVANTAEEARQLVELYGADRDRIDVVPPGADLTRYRPGDRAAARAELGLAPGEPIVAFVG
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHC
RIQPLKAPDVLVRAAAELLRRDPGRALRVLIVGGPSGSGLQRPDALIELAAELGISERVT
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEE
FLPPQPPERLVQVYRAADLVAVPSYSESFGLVAIEAQASGTPVLAADVGGLSTAVRDGAT
ECCCCCHHHHHHHHHHHCEEECCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHCCCC
GLLVRGHETADWADALGALLGDRDRLRRMGLRAVAHAAGFSWAHTAEGLLESYSAALWEF
EEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
HGARAGVGAGRMTPNQARSRALWRRRMGVRR
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDGVSQRVDQRPNRIAVLSVHTSPLAQPGTGDAGGMNVYVLRTAVELAQRGIEVEIFTRA
CCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEECC
TASHIPPVQEAAPGVLVRNVVAGPFEGLDKQDLPTQLCPFTAEVLRQEARQLPGYYDLVH
HHHCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
SHYWLSGQVGWLTRDRWRVPLVHTAHTLAAVKNAALAEGDAPEPVSREIGEKQIIAEADR
CCEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHH
MVANTAEEARQLVELYGADRDRIDVVPPGADLTRYRPGDRAAARAELGLAPGEPIVAFVG
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHC
RIQPLKAPDVLVRAAAELLRRDPGRALRVLIVGGPSGSGLQRPDALIELAAELGISERVT
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEE
FLPPQPPERLVQVYRAADLVAVPSYSESFGLVAIEAQASGTPVLAADVGGLSTAVRDGAT
ECCCCCHHHHHHHHHHHCEEECCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHCCCC
GLLVRGHETADWADALGALLGDRDRLRRMGLRAVAHAAGFSWAHTAEGLLESYSAALWEF
EEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
HGARAGVGAGRMTPNQARSRALWRRRMGVRR
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA