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The map label for this gene is cpo [H]

Identifier: 54027167

GI number: 54027167

Start: 5491510

End: 5492331

Strand: Reverse

Name: cpo [H]

Synonym: nfa51930

Alternate gene names: 54027167

Gene position: 5492331-5491510 (Counterclockwise)

Preceding gene: 54027170

Following gene: 54027166

Centisome position: 91.22

GC content: 71.78

Gene sequence:

>822_bases
ATGGCTACACGGGACGCGGTCAGCGCGGATGGCACCAGGATCGTCTATCGGGTGAACGGGCCGGAGGGTGCACGCCCGCT
GCTGCTCGTGCACGGCTGGTCGGCCGACCTGACCTGCTGGGGCGCCGCCGCCGACGAGCTGGCCCGGCACTACCGGGTGA
TCGCCATGGACCTGCGCGGCCACGGCTACTCCGACATCCCGGACTCCGGCTACGACGATCCGAAGAACTGGGCCGCCGAC
GTCGCGGCCGTGCTCGCCGCGGAGGCGGCCGACACCCGGGCGGTGCTGCTGGGCTGGTCCTACGGCGGCATCGTGGTCAG
CGACTACCTCACCGCCCACGGCACCGACGCGGTCGCCGGGGTGATCTACACCGGCTCGATGGCCAACATCGGGGTGGACG
TGCCGGGCGCGGAGATGGGCTCGGCGCTGCGGCAGGCCATCCCCGGAGTGTTCGACGAGAGCCCCGGCAAGGCGGTGCGC
GGCTTCATGGCCTTCGGCAATGCCAATACCGGCGAGGGCACCGACAAGGGCGTCGACGCGCAGCGGCTGTTCGGCATGAG
CCTGTCCACCCCGCCCGCGGTGCGCAAGGCGCTGTTCTACCGCACCGTCGACAACACCGAGACGCTGCGCGCCCTCGACG
TCCCGGTGCTGGTACTGCACGGCACCGCCGATCCGGTGGTTCCCCTCGCCAACGGCCGCTACGTCGCCGAGACCGTGCCG
ACGGCCCGCACCTCGTTCTGGGAGGGCGCCCAGCACGGCCTGTTCATCGAGGATCGGGCCCGGTTCGTGGCCGAAGTCCG
CGAGTTCGTCGACGGGCTGTAG

Upstream 100 bases:

>100_bases
GGCCTCCCCGATGCCGGAACTTGCTCCCGTGACGACGGCGGTGCGAGTGCTCATGGCCCTCGATCCTAGGTCCGTGCCCA
CGGCACCTAGCATGCGGTGC

Downstream 100 bases:

>100_bases
CCCGCGGGCAACGCTATGTGATAGCGGTCACTCGCCCGGTGGCGGGGCAATCGAGCGTGGAAGTGGGCGTGCACTATGGA
TGGTGTGAGTCAGCGTGTGG

Product: putative hydrolase

Products: NA

Alternate protein names: Chloride peroxidase; Chloroperoxidase F; CPO-F [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MATRDAVSADGTRIVYRVNGPEGARPLLLVHGWSADLTCWGAAADELARHYRVIAMDLRGHGYSDIPDSGYDDPKNWAAD
VAAVLAAEAADTRAVLLGWSYGGIVVSDYLTAHGTDAVAGVIYTGSMANIGVDVPGAEMGSALRQAIPGVFDESPGKAVR
GFMAFGNANTGEGTDKGVDAQRLFGMSLSTPPAVRKALFYRTVDNTETLRALDVPVLVLHGTADPVVPLANGRYVAETVP
TARTSFWEGAQHGLFIEDRARFVAEVREFVDGL

Sequences:

>Translated_273_residues
MATRDAVSADGTRIVYRVNGPEGARPLLLVHGWSADLTCWGAAADELARHYRVIAMDLRGHGYSDIPDSGYDDPKNWAAD
VAAVLAAEAADTRAVLLGWSYGGIVVSDYLTAHGTDAVAGVIYTGSMANIGVDVPGAEMGSALRQAIPGVFDESPGKAVR
GFMAFGNANTGEGTDKGVDAQRLFGMSLSTPPAVRKALFYRTVDNTETLRALDVPVLVLHGTADPVVPLANGRYVAETVP
TARTSFWEGAQHGLFIEDRARFVAEVREFVDGL
>Mature_272_residues
ATRDAVSADGTRIVYRVNGPEGARPLLLVHGWSADLTCWGAAADELARHYRVIAMDLRGHGYSDIPDSGYDDPKNWAADV
AAVLAAEAADTRAVLLGWSYGGIVVSDYLTAHGTDAVAGVIYTGSMANIGVDVPGAEMGSALRQAIPGVFDESPGKAVRG
FMAFGNANTGEGTDKGVDAQRLFGMSLSTPPAVRKALFYRTVDNTETLRALDVPVLVLHGTADPVVPLANGRYVAETVPT
ARTSFWEGAQHGLFIEDRARFVAEVREFVDGL

Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial non-heme bromo- and chloro- peroxidases family [H]

Homologues:

Organism=Escherichia coli, GI1789817, Length=258, Percent_Identity=26.7441860465116, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =1.11.1.10 [H]

Molecular weight: Translated: 28938; Mature: 28807

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRDAVSADGTRIVYRVNGPEGARPLLLVHGWSADLTCWGAAADELARHYRVIAMDLRG
CCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEECCCHHHHHHCEEEEEEEECC
HGYSDIPDSGYDDPKNWAADVAAVLAAEAADTRAVLLGWSYGGIVVSDYLTAHGTDAVAG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECHHHHCCCCCEEE
VIYTGSMANIGVDVPGAEMGSALRQAIPGVFDESPGKAVRGFMAFGNANTGEGTDKGVDA
EEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCH
QRLFGMSLSTPPAVRKALFYRTVDNTETLRALDVPVLVLHGTADPVVPLANGRYVAETVP
HHHCCCCCCCCHHHHHHHHHEECCCCCCEEEECCCEEEEECCCCCEEECCCCEEEEECCC
TARTSFWEGAQHGLFIEDRARFVAEVREFVDGL
CHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATRDAVSADGTRIVYRVNGPEGARPLLLVHGWSADLTCWGAAADELARHYRVIAMDLRG
CCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEECCCHHHHHHCEEEEEEEECC
HGYSDIPDSGYDDPKNWAADVAAVLAAEAADTRAVLLGWSYGGIVVSDYLTAHGTDAVAG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECHHHHCCCCCEEE
VIYTGSMANIGVDVPGAEMGSALRQAIPGVFDESPGKAVRGFMAFGNANTGEGTDKGVDA
EEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCH
QRLFGMSLSTPPAVRKALFYRTVDNTETLRALDVPVLVLHGTADPVVPLANGRYVAETVP
HHHCCCCCCCCHHHHHHHHHEECCCCCCEEEECCCEEEEECCCCCEEECCCCEEEEECCC
TARTSFWEGAQHGLFIEDRARFVAEVREFVDGL
CHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760926; 9642069 [H]