Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54027152

Identifier: 54027152

GI number: 54027152

Start: 5476383

End: 5477282

Strand: Reverse

Name: 54027152

Synonym: nfa51780

Alternate gene names: NA

Gene position: 5477282-5476383 (Counterclockwise)

Preceding gene: 54027153

Following gene: 54027151

Centisome position: 90.97

GC content: 72.89

Gene sequence:

>900_bases
ATGACGACCGACGTGAGCGGTGACCTCGACCGGTCCACCGCGACCGACGCCCCGTTCGCCGCGGTCTGCGCGCTGACCGC
GCTGCCCGGCCCGACCCCGGACGCCGGGCGCTACCGCGGTGTCATCGACCCCGTGTGGACCATCGGTCCCAAGGTGCACG
GCGGCACGATGGTGGCCGCCAGCGCCGCCGCGGCCACCGCCTGGCTGCGCGCGGACGGATCGGCGCCGGCCGGGATGGCC
CCCATCGCCGCGAGCTCGGACTTCCTGGGCGCGCCGGAGCCGGGCGAGGTCGGCTACGAGGTGCGCACCCGCAAGATCGG
CCGCCAGATCTGCCTGGTCGACGTCACGCTGACGCAGAACGATACGCCGAAGGTGCGCACCGCCTTCACCTTCGGCAGGC
TCGACGACGCCGAACCGCGGTTCGCCCACCGCCACGACGACATGCCGGTCGAGCCGCCCGCCGGGGCGATGGAATACGAG
GGCTCGCCGCTGGGCAAGGTCGTCAACGTCGCCAAGGGCGCCGACCTCGCGCTGGATCGGGAGTGGGCCCGCTTCCTCGA
CGGCGAACAGGGCGTGCCCCGGCTGCGGATGTGGATCCGGCCGTTCGAGGGCGACCAGCGCGATCCCGACGTGGCCGCCT
ACTTCGCCATGATGGCCGCCGACATGAGCCCGCCGGTGCCGATGAACCTCGGTCACTTCGGCTGGGCCCCGACCGTGCAG
ATGACCACCTACCTGCGGCGCAGGCCGGCGCCGGGCTGGCTGCGCGTCGTCGCCACCACCCAGGAGGTGGGTGCACGCAT
GTTCGATTGTGACCAGCTCGTGCTCGACAGCACCGGCGCGGTGGTCGCCCAGAGCAGGCAACTCGCACTGCTGCCACAGC
CGAGGGACGGACGAGGCTAG

Upstream 100 bases:

>100_bases
GCTCCCACGGGCGCCACGAGGTCGACGCAACCGTCGTTCTACGCTGTACGAACGGCCCGCGCGCTGCCGCGCCGGCCCGC
GAGGCGACGAAGGAGTGACG

Downstream 100 bases:

>100_bases
CCTTTAGGGCCATGACGAGAATTGCGGTGATCGGTGGAGGCCGGATCGGGGAGGCGTTGATCGCCGGGCTGCTCGAATCC
GGCCGGGCGAGCAAGGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTTDVSGDLDRSTATDAPFAAVCALTALPGPTPDAGRYRGVIDPVWTIGPKVHGGTMVAASAAAATAWLRADGSAPAGMA
PIAASSDFLGAPEPGEVGYEVRTRKIGRQICLVDVTLTQNDTPKVRTAFTFGRLDDAEPRFAHRHDDMPVEPPAGAMEYE
GSPLGKVVNVAKGADLALDREWARFLDGEQGVPRLRMWIRPFEGDQRDPDVAAYFAMMAADMSPPVPMNLGHFGWAPTVQ
MTTYLRRRPAPGWLRVVATTQEVGARMFDCDQLVLDSTGAVVAQSRQLALLPQPRDGRG

Sequences:

>Translated_299_residues
MTTDVSGDLDRSTATDAPFAAVCALTALPGPTPDAGRYRGVIDPVWTIGPKVHGGTMVAASAAAATAWLRADGSAPAGMA
PIAASSDFLGAPEPGEVGYEVRTRKIGRQICLVDVTLTQNDTPKVRTAFTFGRLDDAEPRFAHRHDDMPVEPPAGAMEYE
GSPLGKVVNVAKGADLALDREWARFLDGEQGVPRLRMWIRPFEGDQRDPDVAAYFAMMAADMSPPVPMNLGHFGWAPTVQ
MTTYLRRRPAPGWLRVVATTQEVGARMFDCDQLVLDSTGAVVAQSRQLALLPQPRDGRG
>Mature_298_residues
TTDVSGDLDRSTATDAPFAAVCALTALPGPTPDAGRYRGVIDPVWTIGPKVHGGTMVAASAAAATAWLRADGSAPAGMAP
IAASSDFLGAPEPGEVGYEVRTRKIGRQICLVDVTLTQNDTPKVRTAFTFGRLDDAEPRFAHRHDDMPVEPPAGAMEYEG
SPLGKVVNVAKGADLALDREWARFLDGEQGVPRLRMWIRPFEGDQRDPDVAAYFAMMAADMSPPVPMNLGHFGWAPTVQM
TTYLRRRPAPGWLRVVATTQEVGARMFDCDQLVLDSTGAVVAQSRQLALLPQPRDGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DAGKc domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001206 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32055; Mature: 31923

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDVSGDLDRSTATDAPFAAVCALTALPGPTPDAGRYRGVIDPVWTIGPKVHGGTMVAA
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEH
SAAAATAWLRADGSAPAGMAPIAASSDFLGAPEPGEVGYEVRTRKIGRQICLVDVTLTQN
HHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEECCC
DTPKVRTAFTFGRLDDAEPRFAHRHDDMPVEPPAGAMEYEGSPLGKVVNVAKGADLALDR
CCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEECH
EWARFLDGEQGVPRLRMWIRPFEGDQRDPDVAAYFAMMAADMSPPVPMNLGHFGWAPTVQ
HHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
MTTYLRRRPAPGWLRVVATTQEVGARMFDCDQLVLDSTGAVVAQSRQLALLPQPRDGRG
HHHHHHHCCCCCEEEEEEEHHHHCCCHHCCHHHHHCCCCCEEECCCCEEECCCCCCCCC
>Mature Secondary Structure 
TTDVSGDLDRSTATDAPFAAVCALTALPGPTPDAGRYRGVIDPVWTIGPKVHGGTMVAA
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEH
SAAAATAWLRADGSAPAGMAPIAASSDFLGAPEPGEVGYEVRTRKIGRQICLVDVTLTQN
HHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEECCC
DTPKVRTAFTFGRLDDAEPRFAHRHDDMPVEPPAGAMEYEGSPLGKVVNVAKGADLALDR
CCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEECH
EWARFLDGEQGVPRLRMWIRPFEGDQRDPDVAAYFAMMAADMSPPVPMNLGHFGWAPTVQ
HHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
MTTYLRRRPAPGWLRVVATTQEVGARMFDCDQLVLDSTGAVVAQSRQLALLPQPRDGRG
HHHHHHHCCCCCEEEEEEEHHHHCCCHHCCHHHHHCCCCCEEECCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]