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The map label for this gene is frlC [C]

Identifier: 54027153

GI number: 54027153

Start: 5477382

End: 5478317

Strand: Reverse

Name: frlC [C]

Synonym: nfa51790

Alternate gene names: 54027153

Gene position: 5478317-5477382 (Counterclockwise)

Preceding gene: 54027154

Following gene: 54027152

Centisome position: 90.98

GC content: 72.33

Gene sequence:

>936_bases
TTGGTCGTGGGGCACATCGGGCAGTCGGATCGGACCCGGGTGGGCACCTCCCGGCGCGACATCCTGGTCGGACTGTCGAC
CGCCTCGGTCTACCCGCAGAACACCGAGGCCGCCTTCCGGTATGCGGCCGAATTGGGCTACGACGGCGTGGAATTGATGG
TCTGGGCCGAGCCGGCCAGTCAGAGCATCGCGACCGTGCAGAGTTACGCGCGCCGCTACGACGTGCCGGTGCTGGCCGTG
CACGCGCCGTGCCTGCTCATCTCGCAGCGGGTGTGGGGTGCGGACCCGATCGCCAAACTCGAACGCAGCGTGCACACCGC
CGAGGCGCTCGGCGCCGACACGGTGGTGGTGCATCCGCCGTTCCGCTGGCAGCGCCGCTACGCCGAGGGCTTCGCCGACC
AGGTCGCCGAGCTCGAGGAGCACCACCGGGTGATCGTCGCGGTGGAGAACATGTTTCCCATGCGCGCCGACACGTTGTTC
GGCCGCGGTGAGAAGGCCGCGCGGCGGTTGGCGCGCCGCGGCGGCCCCGGCTGGGGACTGACCGCGTTCAGCCCCTCCTA
CGACCCGACCGACACTGGCTTCCAGCACTACACCCTCGACCTGTCGCACACGGCCACCGCGGGCGCCGATCCGCTGGCGC
TGGCCGCCAGGATGGGGGCGGGACTGGCGCATCTGCATCTGGCCGACGGCCGCGGCGCCGCGCACGACGAGCACCTGATT
CCCGGCAGCGGCAGCCAGCCCTGCGCCGAGGTGTGCGCGCACCTGGTGCGCAGCGGATTCGCCGGGCACGCCGTCGCCGA
GATCAACACCCAGAACGCGCGCAGCACCACCGAGCGCGCGGCCATGCTGCGCCGCACCCTCGCCTTCGCCCGCGAGCACC
TCAACGGCGTCGCGCCCGCACCGAGCCCGGCCTCGGTCCAGGCGAACTCGCAGTAG

Upstream 100 bases:

>100_bases
CCGACGACATCCTCAGCACCGTCATCGCGGTGGTGGTCGGCATCTTCGTCACGCTCGGGCCGCTGGCATTTCTACTCAGC
ACGAACTGATCAGGGGAGCG

Downstream 100 bases:

>100_bases
CTCCCACGGGCGCCACGAGGTCGACGCAACCGTCGTTCTACGCTGTACGAACGGCCCGCGCGCTGCCGCGCCGGCCCGCG
AGGCGACGAAGGAGTGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MVVGHIGQSDRTRVGTSRRDILVGLSTASVYPQNTEAAFRYAAELGYDGVELMVWAEPASQSIATVQSYARRYDVPVLAV
HAPCLLISQRVWGADPIAKLERSVHTAEALGADTVVVHPPFRWQRRYAEGFADQVAELEEHHRVIVAVENMFPMRADTLF
GRGEKAARRLARRGGPGWGLTAFSPSYDPTDTGFQHYTLDLSHTATAGADPLALAARMGAGLAHLHLADGRGAAHDEHLI
PGSGSQPCAEVCAHLVRSGFAGHAVAEINTQNARSTTERAAMLRRTLAFAREHLNGVAPAPSPASVQANSQ

Sequences:

>Translated_311_residues
MVVGHIGQSDRTRVGTSRRDILVGLSTASVYPQNTEAAFRYAAELGYDGVELMVWAEPASQSIATVQSYARRYDVPVLAV
HAPCLLISQRVWGADPIAKLERSVHTAEALGADTVVVHPPFRWQRRYAEGFADQVAELEEHHRVIVAVENMFPMRADTLF
GRGEKAARRLARRGGPGWGLTAFSPSYDPTDTGFQHYTLDLSHTATAGADPLALAARMGAGLAHLHLADGRGAAHDEHLI
PGSGSQPCAEVCAHLVRSGFAGHAVAEINTQNARSTTERAAMLRRTLAFAREHLNGVAPAPSPASVQANSQ
>Mature_311_residues
MVVGHIGQSDRTRVGTSRRDILVGLSTASVYPQNTEAAFRYAAELGYDGVELMVWAEPASQSIATVQSYARRYDVPVLAV
HAPCLLISQRVWGADPIAKLERSVHTAEALGADTVVVHPPFRWQRRYAEGFADQVAELEEHHRVIVAVENMFPMRADTLF
GRGEKAARRLARRGGPGWGLTAFSPSYDPTDTGFQHYTLDLSHTATAGADPLALAARMGAGLAHLHLADGRGAAHDEHLI
PGSGSQPCAEVCAHLVRSGFAGHAVAEINTQNARSTTERAAMLRRTLAFAREHLNGVAPAPSPASVQANSQ

Specific function: Not Clear, May Be Involved In An Isomerization Step. [C]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML2432 and S.coelicolor SCO3347 [H]

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 33424; Mature: 33424

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGHIGQSDRTRVGTSRRDILVGLSTASVYPQNTEAAFRYAAELGYDGVELMVWAEPAS
CEECCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCH
QSIATVQSYARRYDVPVLAVHAPCLLISQRVWGADPIAKLERSVHTAEALGADTVVVHPP
HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCC
FRWQRRYAEGFADQVAELEEHHRVIVAVENMFPMRADTLFGRGEKAARRLARRGGPGWGL
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCC
TAFSPSYDPTDTGFQHYTLDLSHTATAGADPLALAARMGAGLAHLHLADGRGAAHDEHLI
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
PGSGSQPCAEVCAHLVRSGFAGHAVAEINTQNARSTTERAAMLRRTLAFAREHLNGVAPA
CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSPASVQANSQ
CCCCCCCCCCC
>Mature Secondary Structure
MVVGHIGQSDRTRVGTSRRDILVGLSTASVYPQNTEAAFRYAAELGYDGVELMVWAEPAS
CEECCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCH
QSIATVQSYARRYDVPVLAVHAPCLLISQRVWGADPIAKLERSVHTAEALGADTVVVHPP
HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCC
FRWQRRYAEGFADQVAELEEHHRVIVAVENMFPMRADTLFGRGEKAARRLARRGGPGWGL
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCC
TAFSPSYDPTDTGFQHYTLDLSHTATAGADPLALAARMGAGLAHLHLADGRGAAHDEHLI
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
PGSGSQPCAEVCAHLVRSGFAGHAVAEINTQNARSTTERAAMLRRTLAFAREHLNGVAPA
CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSPASVQANSQ
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]