Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54027148

Identifier: 54027148

GI number: 54027148

Start: 5472520

End: 5473545

Strand: Reverse

Name: 54027148

Synonym: nfa51740

Alternate gene names: NA

Gene position: 5473545-5472520 (Counterclockwise)

Preceding gene: 54027149

Following gene: 54027146

Centisome position: 90.9

GC content: 70.86

Gene sequence:

>1026_bases
ATGAACGACGTTGCCAAAGTTATCCACCTGCACGACGTGACCACCGAGACCCGGCCGCGTCCGGCCGCCCGGCGCTGGCC
GGAGCCGCCGCCCGGCGCACCCGCGGGCGGCGTCACCTCCCTGCTCGAGCGTCGCGCCGCGAGCGAACCGCCGGTGCCGC
AGTCGCTGGGCGACCTCGTGCGCGGCAAGCTCGGCAAGCAGATCAGCGCCACCGCCGAGTTCGCCCGCCGCAGGCTCGCC
GGCGACTACCGGGTCGACGAATTCGGCTTCGACGCCGACCTGCTGGAGAACGTCCTGCTGCCGGCGCTGCGTCCGCTGGC
CGAGCACTGGTTCCGGGTCGAGGTCCGCGGCATCGAGAACATCCCGGCCACCGGCGGCGCGCTCATCGTGGCCAATCACG
CGGGCACCGTGCCGGTGGACGGGCTGATGCTCCAGCTGGCCGTGCACGACCGGCATGTCGCGCACCGCGCGTTGCGGCTG
CTGGCCGCCGATCTGATCTTCGAACTCCCGGTGCTCGGCGTGCTCGCCCGCAAGGCTGGCCACACCCTGGCCTGCCGCGA
GGACGCCGAACGGCTGCTGCGTTCCGGTGAGCTCACCGGAGTGTTTCCCGAGGGCTTCAAGGGCGTGGGCAAGAGCTACG
CCGACCGCTACAAGCTGCAGCGCTTCGGCCGGGGCGGCTTCGTCGCCGCCGCCGTGCGCACCGGCGTGCCGATCATCCCG
TGCTCGATCGTCGGCTCGGAGGAGATCTATCCCAAGCTGGCCGACATCAAGCCGCTGGCTCGGCTGCTCGGCCTGCCCTA
CTTCCCGGTGACGCCGACCTTCCCGCATCTCGGCCTGCTCGGCGCGGTCCCGCTGCCGTCGAAGTGGTACATCGAATTCG
GCGAGCCGATCCCCACCACGGCCTACGAGCCGGAGGCCGCCGACGATCCGATGACCATGTTCGAGGTCACCGATCAGGTC
CGCGAGACCATCCAGCAGACGCTCTACAGCCTGCTGACCAAGCGCCGCAACCCGTTCACCGGGTAG

Upstream 100 bases:

>100_bases
TCGGGGGCGCAGCGCTGCGACCCGTCATCGATCCGCGCTGGATCGATGCCGCAGAACACAGACTGCTCGGCCTGCTCGGG
GCCGGTACGGGAGCACACAC

Downstream 100 bases:

>100_bases
GGCGCGCTACAGGTTCTCCCGGCGGCGGGTCACCGCCGCCGCCACCGCGCCGCCCGCGGCACCCAGTGCGAGCGCGGTCG
GTACGCCGATCTTGGCGGCC

Product: putative acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNDVAKVIHLHDVTTETRPRPAARRWPEPPPGAPAGGVTSLLERRAASEPPVPQSLGDLVRGKLGKQISATAEFARRRLA
GDYRVDEFGFDADLLENVLLPALRPLAEHWFRVEVRGIENIPATGGALIVANHAGTVPVDGLMLQLAVHDRHVAHRALRL
LAADLIFELPVLGVLARKAGHTLACREDAERLLRSGELTGVFPEGFKGVGKSYADRYKLQRFGRGGFVAAAVRTGVPIIP
CSIVGSEEIYPKLADIKPLARLLGLPYFPVTPTFPHLGLLGAVPLPSKWYIEFGEPIPTTAYEPEAADDPMTMFEVTDQV
RETIQQTLYSLLTKRRNPFTG

Sequences:

>Translated_341_residues
MNDVAKVIHLHDVTTETRPRPAARRWPEPPPGAPAGGVTSLLERRAASEPPVPQSLGDLVRGKLGKQISATAEFARRRLA
GDYRVDEFGFDADLLENVLLPALRPLAEHWFRVEVRGIENIPATGGALIVANHAGTVPVDGLMLQLAVHDRHVAHRALRL
LAADLIFELPVLGVLARKAGHTLACREDAERLLRSGELTGVFPEGFKGVGKSYADRYKLQRFGRGGFVAAAVRTGVPIIP
CSIVGSEEIYPKLADIKPLARLLGLPYFPVTPTFPHLGLLGAVPLPSKWYIEFGEPIPTTAYEPEAADDPMTMFEVTDQV
RETIQQTLYSLLTKRRNPFTG
>Mature_341_residues
MNDVAKVIHLHDVTTETRPRPAARRWPEPPPGAPAGGVTSLLERRAASEPPVPQSLGDLVRGKLGKQISATAEFARRRLA
GDYRVDEFGFDADLLENVLLPALRPLAEHWFRVEVRGIENIPATGGALIVANHAGTVPVDGLMLQLAVHDRHVAHRALRL
LAADLIFELPVLGVLARKAGHTLACREDAERLLRSGELTGVFPEGFKGVGKSYADRYKLQRFGRGGFVAAAVRTGVPIIP
CSIVGSEEIYPKLADIKPLARLLGLPYFPVTPTFPHLGLLGAVPLPSKWYIEFGEPIPTTAYEPEAADDPMTMFEVTDQV
RETIQQTLYSLLTKRRNPFTG

Specific function: Unknown

COG id: COG0204

COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML2427 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002123
- InterPro:   IPR016676 [H]

Pfam domain/function: PF01553 Acyltransferase [H]

EC number: NA

Molecular weight: Translated: 37271; Mature: 37271

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDVAKVIHLHDVTTETRPRPAARRWPEPPPGAPAGGVTSLLERRAASEPPVPQSLGDLV
CCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
RGKLGKQISATAEFARRRLAGDYRVDEFGFDADLLENVLLPALRPLAEHWFRVEVRGIEN
HHHHCCHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCC
IPATGGALIVANHAGTVPVDGLMLQLAVHDRHVAHRALRLLAADLIFELPVLGVLARKAG
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HTLACREDAERLLRSGELTGVFPEGFKGVGKSYADRYKLQRFGRGGFVAAAVRTGVPIIP
CEEEHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE
CSIVGSEEIYPKLADIKPLARLLGLPYFPVTPTFPHLGLLGAVPLPSKWYIEFGEPIPTT
EEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCC
AYEPEAADDPMTMFEVTDQVRETIQQTLYSLLTKRRNPFTG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNDVAKVIHLHDVTTETRPRPAARRWPEPPPGAPAGGVTSLLERRAASEPPVPQSLGDLV
CCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
RGKLGKQISATAEFARRRLAGDYRVDEFGFDADLLENVLLPALRPLAEHWFRVEVRGIEN
HHHHCCHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCC
IPATGGALIVANHAGTVPVDGLMLQLAVHDRHVAHRALRLLAADLIFELPVLGVLARKAG
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HTLACREDAERLLRSGELTGVFPEGFKGVGKSYADRYKLQRFGRGGFVAAAVRTGVPIIP
CEEEHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE
CSIVGSEEIYPKLADIKPLARLLGLPYFPVTPTFPHLGLLGAVPLPSKWYIEFGEPIPTT
EEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCC
AYEPEAADDPMTMFEVTDQVRETIQQTLYSLLTKRRNPFTG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]