Click here to switch to the map view.

The map label for this gene is 54027139

Identifier: 54027139

GI number: 54027139

Start: 5463881

End: 5464405

Strand: Reverse

Name: 54027139

Synonym: nfa51650

Alternate gene names: NA

Gene position: 5464405-5463881 (Counterclockwise)

Preceding gene: 54027140

Following gene: 54027138

Centisome position: 90.75

GC content: 72.57

Gene sequence:

>525_bases
GTGAGGTATCCGCCCAGCCCTCTCGGTCCGCCCGCGGAGCCTGCCCCCGCACCGGAAGAGGTGCGCATCGCGACCCAGCT
GTGGTGGGGCGTGGTCGCGGTCGGCCTGGTGCGCGTGATCGCCGGGGTGCTCGCGCTGCTCGACCGGCGCGCCGAACTCG
AGCGCGGCATCCTCGACGCCGCCCGGGCCTCCGACCCGAACGCCCCGCTCGCCGCCGCCCAGCTGGCGGTCTCGATCATC
ATCGTGTTCACCATCGTGGCCGGGCTGGGCTTGCTGGCGGTGACCGCCGCCGTGGCCCACCAATTCGGCCGCGGCCGGTC
CTGGGCGCGGGTGGTGCTGACGATCGGCGGCATCCTGCTGTTGTTCGACCTGCTCACCGCGCTGTTCGCGGTGAGCGGCG
GTACCGGCGCGGCGGCCTTCGTGGCCGGTGCGGCGGGCGTTCTGCAGGGTGTGCTGGCCACCGGTGCGCTGTTTCTGGGT
TATCGGCCCGCCGCGAATGGGTACTTCTCTGTGAACCGAAGGTAA

Upstream 100 bases:

>100_bases
ACCGGCGCGCCGCCGTGCTCGAGTCGCTGGTCGGCATTCGCCGGGCGGGCGCGGACATCGTGCTGACCTACTGGGCGACC
GAGGCCGCGCACTGGCTGTC

Downstream 100 bases:

>100_bases
ACCGGTGACGGCCTCATCGCCGAGTTTGTCCCGCCGACCGGGACATGTATGGTGAGAGTTGTCACAGGAGACATGGGAAC
CGGTGGTCGGTGGTCATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRYPPSPLGPPAEPAPAPEEVRIATQLWWGVVAVGLVRVIAGVLALLDRRAELERGILDAARASDPNAPLAAAQLAVSII
IVFTIVAGLGLLAVTAAVAHQFGRGRSWARVVLTIGGILLLFDLLTALFAVSGGTGAAAFVAGAAGVLQGVLATGALFLG
YRPAANGYFSVNRR

Sequences:

>Translated_174_residues
MRYPPSPLGPPAEPAPAPEEVRIATQLWWGVVAVGLVRVIAGVLALLDRRAELERGILDAARASDPNAPLAAAQLAVSII
IVFTIVAGLGLLAVTAAVAHQFGRGRSWARVVLTIGGILLLFDLLTALFAVSGGTGAAAFVAGAAGVLQGVLATGALFLG
YRPAANGYFSVNRR
>Mature_174_residues
MRYPPSPLGPPAEPAPAPEEVRIATQLWWGVVAVGLVRVIAGVLALLDRRAELERGILDAARASDPNAPLAAAQLAVSII
IVFTIVAGLGLLAVTAAVAHQFGRGRSWARVVLTIGGILLLFDLLTALFAVSGGTGAAAFVAGAAGVLQGVLATGALFLG
YRPAANGYFSVNRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17830; Mature: 17830

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYPPSPLGPPAEPAPAPEEVRIATQLWWGVVAVGLVRVIAGVLALLDRRAELERGILDA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARASDPNAPLAAAQLAVSIIIVFTIVAGLGLLAVTAAVAHQFGRGRSWARVVLTIGGILL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LFDLLTALFAVSGGTGAAAFVAGAAGVLQGVLATGALFLGYRPAANGYFSVNRR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCC
>Mature Secondary Structure
MRYPPSPLGPPAEPAPAPEEVRIATQLWWGVVAVGLVRVIAGVLALLDRRAELERGILDA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARASDPNAPLAAAQLAVSIIIVFTIVAGLGLLAVTAAVAHQFGRGRSWARVVLTIGGILL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LFDLLTALFAVSGGTGAAAFVAGAAGVLQGVLATGALFLGYRPAANGYFSVNRR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA