Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54027108

Identifier: 54027108

GI number: 54027108

Start: 5437011

End: 5437373

Strand: Reverse

Name: 54027108

Synonym: nfa51340

Alternate gene names: NA

Gene position: 5437373-5437011 (Counterclockwise)

Preceding gene: 54027110

Following gene: 54027107

Centisome position: 90.3

GC content: 69.15

Gene sequence:

>363_bases
ATGACGGCATCGATCGTCTTCCTCGTCTACGTCAACGACACCGCCGCGTCCGCCCGCTTCTACGGCGACCTGCTGGACAT
GAAGCCCGATTTCGAGACGCCCGGCTACATCACCTTCGACCTCGGCCCCGGCGCCGATCTGGCGCTGTGGTCGGGCCGGT
TCGACGGTCTCTCGCCCGCCACGCCGCGCACCTCCGAGGTGTGCCTGGCGCTGCCCGACGGCGCCGAGGTGGACGCGAAG
TTCCGGGAGTGGCAGGCCAAGGGCGTCACCGTGGTGCAGGAGCCGCACGACGAATCGTTCGGGCGCACCTTCGTCGTCGC
CGATCCGGACGGCAACCTCATCCGCGTCGCACCGCAGGACTGA

Upstream 100 bases:

>100_bases
GGCGGCACTGTTGCAGTGTGTCGGGAAATCACGCCGGAATGTGTCGGGTATCTGCCCGACAGTGGCGGGGCAACAGCAAC
CGATCCTGGAAAGGACTGCC

Downstream 100 bases:

>100_bases
CCGCGCCGGAGACCGCGGCGGCCGGCCCTCGGCGGGCCGACTGCCGCGGTCTGTGTGACCAGGGTGACCGCGCTCGGGGC
GGGTCGATCTGACAGGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Glyoxalase Protein; Glyoxalase Family Protein Superfamily; Glyoxalase Family Protein; Phenazine Antibiotic Biosynthesis Protein; Glyoxalase/Dioxygenase; Glyoxalase; Drug Resistance Protein; Ehpr Protein; Fosfomycin Resistance Protein FosX

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTASIVFLVYVNDTAASARFYGDLLDMKPDFETPGYITFDLGPGADLALWSGRFDGLSPATPRTSEVCLALPDGAEVDAK
FREWQAKGVTVVQEPHDESFGRTFVVADPDGNLIRVAPQD

Sequences:

>Translated_120_residues
MTASIVFLVYVNDTAASARFYGDLLDMKPDFETPGYITFDLGPGADLALWSGRFDGLSPATPRTSEVCLALPDGAEVDAK
FREWQAKGVTVVQEPHDESFGRTFVVADPDGNLIRVAPQD
>Mature_119_residues
TASIVFLVYVNDTAASARFYGDLLDMKPDFETPGYITFDLGPGADLALWSGRFDGLSPATPRTSEVCLALPDGAEVDAKF
REWQAKGVTVVQEPHDESFGRTFVVADPDGNLIRVAPQD

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13027; Mature: 12895

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASIVFLVYVNDTAASARFYGDLLDMKPDFETPGYITFDLGPGADLALWSGRFDGLSPA
CCCEEEEEEEECCCCCCCEEEEHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCC
TPRTSEVCLALPDGAEVDAKFREWQAKGVTVVQEPHDESFGRTFVVADPDGNLIRVAPQD
CCCCCCEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEECCCCCEEEEECCC
>Mature Secondary Structure 
TASIVFLVYVNDTAASARFYGDLLDMKPDFETPGYITFDLGPGADLALWSGRFDGLSPA
CCEEEEEEEECCCCCCCEEEEHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCC
TPRTSEVCLALPDGAEVDAKFREWQAKGVTVVQEPHDESFGRTFVVADPDGNLIRVAPQD
CCCCCCEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA