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The map label for this gene is 54026851

Identifier: 54026851

GI number: 54026851

Start: 5091458

End: 5092081

Strand: Reverse

Name: 54026851

Synonym: nfa48770

Alternate gene names: NA

Gene position: 5092081-5091458 (Counterclockwise)

Preceding gene: 54026858

Following gene: 54026850

Centisome position: 84.57

GC content: 67.95

Gene sequence:

>624_bases
ATGACAGGGACCCAACGGCGTCAGCAACTCATCGAGATCGGCCGCGCCCTGTTCGCCGAGCGGGGCTACGACGCGACCTC
CATCGAGGAGATCGCGCAGCGGGCCCAGGTGTCCAAACCCGTGGTGTACGAACACTTCGGCGGCAAGGAGGGCCTCTACG
CGGTGGTCGTGGACCGCGAGATGTCGATGCTGCTGGACATGATCACCTCCTCGCTCACACAGAACCGGTCCCGGGTGCGG
CTCGAGCAGGTGGCGCTGGCGCTGCTCACCTATATCGAGGAACGCACCGACGGCTTCCGCATCCTGGTGCGGGACCAGGC
CGCCACCGCCACCGCCGAGGAGAGCCGCTACTCGAGCCTGCTCAACGAGGCCGTCAACCAGGTCGCGCACATCCTGGCCG
GTGATTTCGGCCGCCGCGGTTTCGACACCAGCCTGGCCACCCTCTACGCTCAGGCACTCGTCGGCATGGTCTCCACCGCC
GCGACCTGGTGGCTCGACGTGCGGGTCCCGTCGAAGGAAGTGGTGGCCGCGCACCTGGTGAACCTGTGCTGGAACGGTCT
GAGCCACCTCGAGGCCGACCCCGGGCTCAGTTCCGAATGGCCCACCGGAGCGGCGGCGGACTGA

Upstream 100 bases:

>100_bases
GACGGGCAGCCAGGACCGGCGAGCCCGCCGGTCGGCCACCGGACGCGAAAAGAGGGGACGAGTGTCTTCGGGTGAGCCGC
ACCGGGTGTCCCGACCGCGG

Downstream 100 bases:

>100_bases
CCGGACGGTGATAACCAGCGAATTGCGATGTGGGTCCGGACGGATGCTCGAATTGGTCGTCGGGCGTTCACCTGGTGGTA
CGGTTCACCCATCCTCTGGG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; TetR-Type Transcriptional Regulator; Transcriptional Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcriptional Regulator TetR-Family; TetR-Family Protein Regulatory Protein; Transcription Regulator; TetR-Family Transcriptional Regulator Protein

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTGTQRRQQLIEIGRALFAERGYDATSIEEIAQRAQVSKPVVYEHFGGKEGLYAVVVDREMSMLLDMITSSLTQNRSRVR
LEQVALALLTYIEERTDGFRILVRDQAATATAEESRYSSLLNEAVNQVAHILAGDFGRRGFDTSLATLYAQALVGMVSTA
ATWWLDVRVPSKEVVAAHLVNLCWNGLSHLEADPGLSSEWPTGAAAD

Sequences:

>Translated_207_residues
MTGTQRRQQLIEIGRALFAERGYDATSIEEIAQRAQVSKPVVYEHFGGKEGLYAVVVDREMSMLLDMITSSLTQNRSRVR
LEQVALALLTYIEERTDGFRILVRDQAATATAEESRYSSLLNEAVNQVAHILAGDFGRRGFDTSLATLYAQALVGMVSTA
ATWWLDVRVPSKEVVAAHLVNLCWNGLSHLEADPGLSSEWPTGAAAD
>Mature_206_residues
TGTQRRQQLIEIGRALFAERGYDATSIEEIAQRAQVSKPVVYEHFGGKEGLYAVVVDREMSMLLDMITSSLTQNRSRVRL
EQVALALLTYIEERTDGFRILVRDQAATATAEESRYSSLLNEAVNQVAHILAGDFGRRGFDTSLATLYAQALVGMVSTAA
TWWLDVRVPSKEVVAAHLVNLCWNGLSHLEADPGLSSEWPTGAAAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22787; Mature: 22656

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTQRRQQLIEIGRALFAERGYDATSIEEIAQRAQVSKPVVYEHFGGKEGLYAVVVDRE
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECHH
MSMLLDMITSSLTQNRSRVRLEQVALALLTYIEERTDGFRILVRDQAATATAEESRYSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
LNEAVNQVAHILAGDFGRRGFDTSLATLYAQALVGMVSTAATWWLDVRVPSKEVVAAHLV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHH
NLCWNGLSHLEADPGLSSEWPTGAAAD
HHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGTQRRQQLIEIGRALFAERGYDATSIEEIAQRAQVSKPVVYEHFGGKEGLYAVVVDRE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECHH
MSMLLDMITSSLTQNRSRVRLEQVALALLTYIEERTDGFRILVRDQAATATAEESRYSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
LNEAVNQVAHILAGDFGRRGFDTSLATLYAQALVGMVSTAATWWLDVRVPSKEVVAAHLV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHH
NLCWNGLSHLEADPGLSSEWPTGAAAD
HHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA