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The map label for this gene is 54026821

Identifier: 54026821

GI number: 54026821

Start: 5060801

End: 5061592

Strand: Reverse

Name: 54026821

Synonym: nfa48470

Alternate gene names: NA

Gene position: 5061592-5060801 (Counterclockwise)

Preceding gene: 54026824

Following gene: 54026820

Centisome position: 84.06

GC content: 67.3

Gene sequence:

>792_bases
ATGGGTGCCACGCCGAACACCGCGCTGCGAGCGGCTAGGAATGCGCGTCTCATGAGCCAGGACGATCTGGCCCGGGCTTT
GCGCGCGGCGGGGTGTCCCAGTGCCACAAAGCGTCTCGTGCAGCGGTGGGAGGCGGGGCACACCGTGCATCCGCGTCCGG
CGCACGCGCGAGCCCTGGAGCGGGTGATGGGATTGCCGATCGAGACGCTCGGTTTCGGTGCGGTGATGGCGGGGCGTGAC
CTGTCCGGAGCACCGGACGGCAGCCACGAGGTGGATTCGGCGATCGGGGAAGTCGCGGCCGAGCAACGCGCGACGAGCGC
CATCCGATCGCGCCTGCCCGGAAATTATGCGGGCGTGTGGCTTTCGCGGTACGAATACTACTCGAGCGGGCGTGACGCGA
CGTTCACGGCGGCACACCATGTGGTCGTCCTGCAGCACGACGATCGCCTCACTGTTCGCAGCCTCCCGGGATCGGCACAC
TCGGCGATGGAGATGGACCTGACCGTCGACGGCCATGTCGCGACGGGCACGTGGAGTGAGCGCACGGCCTCCGACGGGTA
CTACGGCGGGGCTCGGTACCACGGGGCGATCCAGCTGTTGATCGAGTTGACCGGCAGGCGGATGGCGGGGAAGTGGGTCG
GATTCGGGAAGGACTTCGAGATCAATTCCGGGCCGTGGGAGTTGGTGTTGCGGAATCCGTCCACCGCGAAGTCGGTGATC
GATGCCTATAACCGTGCGCCGGAACAGGATTGGTCGGTGTCAGGTCGCGGCGACGAGTCCTCCGGCGAGTAG

Upstream 100 bases:

>100_bases
AGCCTCTGCTACCGAAACGACTGCCACGACGACGAATCCGGCGTCGATTCGCACGCATTGAGGGCGACATTTCGGCGTCG
AAACGGCTACTGTTGCCCGC

Downstream 100 bases:

>100_bases
CAGCAGCACCGTCGCCGCGAGGTCGATGCGGGCGACGATGCCGGGGGCGAGGTGGATCGCGCCCACGACGAGCAGCAGGG
TCGAGGTGACACCTTCAGCC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MGATPNTALRAARNARLMSQDDLARALRAAGCPSATKRLVQRWEAGHTVHPRPAHARALERVMGLPIETLGFGAVMAGRD
LSGAPDGSHEVDSAIGEVAAEQRATSAIRSRLPGNYAGVWLSRYEYYSSGRDATFTAAHHVVVLQHDDRLTVRSLPGSAH
SAMEMDLTVDGHVATGTWSERTASDGYYGGARYHGAIQLLIELTGRRMAGKWVGFGKDFEINSGPWELVLRNPSTAKSVI
DAYNRAPEQDWSVSGRGDESSGE

Sequences:

>Translated_263_residues
MGATPNTALRAARNARLMSQDDLARALRAAGCPSATKRLVQRWEAGHTVHPRPAHARALERVMGLPIETLGFGAVMAGRD
LSGAPDGSHEVDSAIGEVAAEQRATSAIRSRLPGNYAGVWLSRYEYYSSGRDATFTAAHHVVVLQHDDRLTVRSLPGSAH
SAMEMDLTVDGHVATGTWSERTASDGYYGGARYHGAIQLLIELTGRRMAGKWVGFGKDFEINSGPWELVLRNPSTAKSVI
DAYNRAPEQDWSVSGRGDESSGE
>Mature_262_residues
GATPNTALRAARNARLMSQDDLARALRAAGCPSATKRLVQRWEAGHTVHPRPAHARALERVMGLPIETLGFGAVMAGRDL
SGAPDGSHEVDSAIGEVAAEQRATSAIRSRLPGNYAGVWLSRYEYYSSGRDATFTAAHHVVVLQHDDRLTVRSLPGSAHS
AMEMDLTVDGHVATGTWSERTASDGYYGGARYHGAIQLLIELTGRRMAGKWVGFGKDFEINSGPWELVLRNPSTAKSVID
AYNRAPEQDWSVSGRGDESSGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28354; Mature: 28223

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGATPNTALRAARNARLMSQDDLARALRAAGCPSATKRLVQRWEAGHTVHPRPAHARALE
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
RVMGLPIETLGFGAVMAGRDLSGAPDGSHEVDSAIGEVAAEQRATSAIRSRLPGNYAGVW
HHHCCCHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LSRYEYYSSGRDATFTAAHHVVVLQHDDRLTVRSLPGSAHSAMEMDLTVDGHVATGTWSE
HHHHHHHCCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEECCEEECCCCCC
RTASDGYYGGARYHGAIQLLIELTGRRMAGKWVGFGKDFEINSGPWELVLRNPSTAKSVI
CCCCCCCCCCHHHHHHHHHHHHHHCCHHCCHHCCCCCCEECCCCCEEEEEECCCHHHHHH
DAYNRAPEQDWSVSGRGDESSGE
HHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GATPNTALRAARNARLMSQDDLARALRAAGCPSATKRLVQRWEAGHTVHPRPAHARALE
CCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
RVMGLPIETLGFGAVMAGRDLSGAPDGSHEVDSAIGEVAAEQRATSAIRSRLPGNYAGVW
HHHCCCHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LSRYEYYSSGRDATFTAAHHVVVLQHDDRLTVRSLPGSAHSAMEMDLTVDGHVATGTWSE
HHHHHHHCCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEECCEEECCCCCC
RTASDGYYGGARYHGAIQLLIELTGRRMAGKWVGFGKDFEINSGPWELVLRNPSTAKSVI
CCCCCCCCCCHHHHHHHHHHHHHHCCHHCCHHCCCCCCEECCCCCEEEEEECCCHHHHHH
DAYNRAPEQDWSVSGRGDESSGE
HHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA