The gene/protein map for NC_006361 is currently unavailable.
Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is fabG3 [H]

Identifier: 54026780

GI number: 54026780

Start: 5019727

End: 5020473

Strand: Reverse

Name: fabG3 [H]

Synonym: nfa48060

Alternate gene names: 54026780

Gene position: 5020473-5019727 (Counterclockwise)

Preceding gene: 54026781

Following gene: 54026778

Centisome position: 83.38

GC content: 65.6

Gene sequence:

>747_bases
ATGGGTGTACTGGACGGCAAGGTGGCCCTGATCACCGGCGGCGCCCGCGGAATGGGTGCCGAGCACGCGCGGCAGTTCGT
GGCCGAAGGGGCCCGGGTGGTGTTCGGCGATGTGCGTGACGAGGAGGGTGAGGCGCTGGCCGCCGAGCTGGGTGATGACG
CGCATTACGTGCACCACGATGTCACCAGTGAATCGGAATGGTCCGAGGTCGTCGCCGCGACGATCGACCGGTTCGGCAAG
CTCGACATCCTGGTCAACAATGCGGGTATCAACCGGTTCGCTCCCATCTGCGAGCAGTCGCTCGATGAGTTCCGCCTGAT
CCTGGACACCAACCTCACCAGCACCTGGCTCGGGATCCGGGCGGCGGCGCCGGTCATGTCGGACGGCGGGTCGATCGTGA
ACATGTCGTCTGTCGAGGGATACGCCGGTGCCGCAGGTCTGTCCGCCTACGCCGCCAGCAAATTCGGTATCCGTGGACTG
ACGAAAGTGGCCGCCCGCGAGCTGGGCTCCCGCAATATCCGAGTCAACTCGGTGCATCCGGGTGGAATCGCGACCCCGAT
GAACACCGAGTTCGCGCCCAATCTCGATCCGGACAAACCGTTCGTGCCTTCGCTGCCCATCGCGCGATGGGGACGGGCCG
CCGAGGTGACCCATGTGGTGGTGTTCCTCGCCTCCGATGCCGCCAGCTACTGCACGGGTAGTGAAGTCCTTGTCGACGGT
GGTCTGCTCGCCGGCCCAGGCTACTGA

Upstream 100 bases:

>100_bases
GTGGTGAAGCGCGCCATATTCCGTTCATTGGGAAAGGGGACTCATACGTTGGCCCAGCGCGCATACGGTCCCGTCCAGGC
GAGGAAAGGCAGGGACGAAG

Downstream 100 bases:

>100_bases
GGCCCCGCCCGTTCGTTTACGGTGCGGTCATCACGGCAGGTTCTGCCGTGATGACCGCTCGATCTCGTGCGCGGCGGAAG
CGGAGGTGTCCACTGGTCGC

Product: putative short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MGVLDGKVALITGGARGMGAEHARQFVAEGARVVFGDVRDEEGEALAAELGDDAHYVHHDVTSESEWSEVVAATIDRFGK
LDILVNNAGINRFAPICEQSLDEFRLILDTNLTSTWLGIRAAAPVMSDGGSIVNMSSVEGYAGAAGLSAYAASKFGIRGL
TKVAARELGSRNIRVNSVHPGGIATPMNTEFAPNLDPDKPFVPSLPIARWGRAAEVTHVVVFLASDAASYCTGSEVLVDG
GLLAGPGY

Sequences:

>Translated_248_residues
MGVLDGKVALITGGARGMGAEHARQFVAEGARVVFGDVRDEEGEALAAELGDDAHYVHHDVTSESEWSEVVAATIDRFGK
LDILVNNAGINRFAPICEQSLDEFRLILDTNLTSTWLGIRAAAPVMSDGGSIVNMSSVEGYAGAAGLSAYAASKFGIRGL
TKVAARELGSRNIRVNSVHPGGIATPMNTEFAPNLDPDKPFVPSLPIARWGRAAEVTHVVVFLASDAASYCTGSEVLVDG
GLLAGPGY
>Mature_247_residues
GVLDGKVALITGGARGMGAEHARQFVAEGARVVFGDVRDEEGEALAAELGDDAHYVHHDVTSESEWSEVVAATIDRFGKL
DILVNNAGINRFAPICEQSLDEFRLILDTNLTSTWLGIRAAAPVMSDGGSIVNMSSVEGYAGAAGLSAYAASKFGIRGLT
KVAARELGSRNIRVNSVHPGGIATPMNTEFAPNLDPDKPFVPSLPIARWGRAAEVTHVVVFLASDAASYCTGSEVLVDGG
LLAGPGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI59889578, Length=225, Percent_Identity=39.1111111111111, Blast_Score=125, Evalue=3e-29,
Organism=Homo sapiens, GI40254992, Length=238, Percent_Identity=34.453781512605, Blast_Score=124, Evalue=8e-29,
Organism=Homo sapiens, GI4758504, Length=261, Percent_Identity=34.0996168582375, Blast_Score=120, Evalue=9e-28,
Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=33.6065573770492, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=36.328125, Blast_Score=114, Evalue=9e-26,
Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=7e-24,
Organism=Homo sapiens, GI66933014, Length=252, Percent_Identity=31.3492063492063, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI83715985, Length=262, Percent_Identity=32.824427480916, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=31.8548387096774, Blast_Score=98, Evalue=6e-21,
Organism=Homo sapiens, GI126723750, Length=247, Percent_Identity=31.1740890688259, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=34.1836734693878, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=31.3253012048193, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI7705925, Length=258, Percent_Identity=28.6821705426357, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=35.4651162790698, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=32.4324324324324, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4503301, Length=250, Percent_Identity=28, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=32.6424870466321, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4504505, Length=212, Percent_Identity=29.7169811320755, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI20149619, Length=196, Percent_Identity=30.6122448979592, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI7657478, Length=194, Percent_Identity=32.9896907216495, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI142976729, Length=209, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI4503817, Length=195, Percent_Identity=27.6923076923077, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=37.1541501976285, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=37.2, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI87082160, Length=244, Percent_Identity=32.7868852459016, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=36.0995850622407, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI2367365, Length=245, Percent_Identity=35.9183673469388, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=32.2448979591837, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1789208, Length=245, Percent_Identity=31.0204081632653, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=34.0163934426229, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=31.6205533596838, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=34.9593495934959, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=30.4878048780488, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787526, Length=219, Percent_Identity=30.5936073059361, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1786812, Length=249, Percent_Identity=27.710843373494, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787820, Length=188, Percent_Identity=29.7872340425532, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788891, Length=244, Percent_Identity=29.5081967213115, Blast_Score=72, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17555706, Length=250, Percent_Identity=37.2, Blast_Score=145, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=33.6032388663968, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=33.6032388663968, Blast_Score=123, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=30.9236947791165, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=30.2788844621514, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17559104, Length=255, Percent_Identity=31.7647058823529, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=31.2741312741313, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=31.8007662835249, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=28.2258064516129, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=30.4182509505703, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI115534694, Length=242, Percent_Identity=33.0578512396694, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17538480, Length=266, Percent_Identity=30.0751879699248, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=32.8358208955224, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17562910, Length=271, Percent_Identity=30.2583025830258, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=28.7878787878788, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=30.9160305343511, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17538182, Length=255, Percent_Identity=30.5882352941176, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=29.9625468164794, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17551412, Length=256, Percent_Identity=29.296875, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=30.6513409961686, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=30.1158301158301, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17567345, Length=213, Percent_Identity=30.9859154929577, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17563726, Length=254, Percent_Identity=28.3464566929134, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=28.8973384030418, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17568967, Length=212, Percent_Identity=30.6603773584906, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=264, Percent_Identity=26.5151515151515, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=31.1284046692607, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=28.4090909090909, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=29.8850574712644, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=29.8039215686275, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17508895, Length=189, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=31.7708333333333, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=32.1052631578947, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=253, Percent_Identity=29.2490118577075, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=32.4742268041237, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17508651, Length=246, Percent_Identity=26.4227642276423, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=187, Percent_Identity=32.620320855615, Blast_Score=90, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6324126, Length=253, Percent_Identity=30.0395256916996, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6322227, Length=206, Percent_Identity=29.126213592233, Blast_Score=70, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6323882, Length=216, Percent_Identity=27.3148148148148, Blast_Score=68, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322226, Length=208, Percent_Identity=28.3653846153846, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24644339, Length=245, Percent_Identity=34.6938775510204, Blast_Score=130, Evalue=8e-31,
Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=33.2, Blast_Score=124, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=34.2741935483871, Blast_Score=124, Evalue=7e-29,
Organism=Drosophila melanogaster, GI21357041, Length=244, Percent_Identity=34.0163934426229, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI17737361, Length=262, Percent_Identity=32.4427480916031, Blast_Score=121, Evalue=5e-28,
Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=34.2857142857143, Blast_Score=120, Evalue=6e-28,
Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=33.8645418326693, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24643142, Length=238, Percent_Identity=31.9327731092437, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24640492, Length=192, Percent_Identity=32.2916666666667, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24644337, Length=251, Percent_Identity=33.8645418326693, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281364892, Length=186, Percent_Identity=32.258064516129, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI18859837, Length=202, Percent_Identity=30.6930693069307, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21358495, Length=194, Percent_Identity=29.8969072164948, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571387, Length=203, Percent_Identity=29.5566502463054, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24665243, Length=200, Percent_Identity=30.5, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI221331218, Length=200, Percent_Identity=30.5, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24648693, Length=197, Percent_Identity=32.994923857868, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21355889, Length=197, Percent_Identity=32.994923857868, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21355631, Length=171, Percent_Identity=30.4093567251462, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24641388, Length=241, Percent_Identity=28.6307053941909, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24665247, Length=201, Percent_Identity=30.3482587064677, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221331216, Length=201, Percent_Identity=30.3482587064677, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24663911, Length=197, Percent_Identity=28.4263959390863, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581726, Length=203, Percent_Identity=29.064039408867, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24584748, Length=190, Percent_Identity=30, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI161076933, Length=190, Percent_Identity=30, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.53 [H]

Molecular weight: Translated: 25940; Mature: 25809

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MGVLDGKVALITGGARGMGAEHARQFVAEGARVVFGDVRDEEGEALAAELGDDAHYVHHD
CCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCCEEEEEC
VTSESEWSEVVAATIDRFGKLDILVNNAGINRFAPICEQSLDEFRLILDTNLTSTWLGIR
CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHH
AAAPVMSDGGSIVNMSSVEGYAGAAGLSAYAASKFGIRGLTKVAARELGSRNIRVNSVHP
HCCCEECCCCCEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECC
GGIATPMNTEFAPNLDPDKPFVPSLPIARWGRAAEVTHVVVFLASDAASYCTGSEVLVDG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHEEEEEEEECCCHHHCCCCEEEEEC
GLLAGPGY
CEECCCCC
>Mature Secondary Structure 
GVLDGKVALITGGARGMGAEHARQFVAEGARVVFGDVRDEEGEALAAELGDDAHYVHHD
CCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCCEEEEEC
VTSESEWSEVVAATIDRFGKLDILVNNAGINRFAPICEQSLDEFRLILDTNLTSTWLGIR
CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHH
AAAPVMSDGGSIVNMSSVEGYAGAAGLSAYAASKFGIRGLTKVAARELGSRNIRVNSVHP
HCCCEECCCCCEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECC
GGIATPMNTEFAPNLDPDKPFVPSLPIARWGRAAEVTHVVVFLASDAASYCTGSEVLVDG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHEEEEEEEECCCHHHCCCCEEEEEC
GLLAGPGY
CEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]