| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026747
Identifier: 54026747
GI number: 54026747
Start: 4983361
End: 4983753
Strand: Reverse
Name: 54026747
Synonym: nfa47730
Alternate gene names: NA
Gene position: 4983753-4983361 (Counterclockwise)
Preceding gene: 54026749
Following gene: 54026746
Centisome position: 82.77
GC content: 64.89
Gene sequence:
>393_bases GTGCTCGGTATTGACGGCTGCCTGAAACGCATCATGGACATTCCCGGTGCGCGCAGCGTGACGATGGTGGATGGTGCGAG CGGTCTGGCGATCGCGGCGGCGGGTCGGCACGATCTGGTGGATCAGCACGAAGACGCCGCGGGCACAACGGATGTGGTGC GGGCGGTGCTGGGCTGTCCGGCGCTGGCGAACGGGCCGGGCGGCGACGACGTGTGCGAGATCATCGTGTGCGGCAGCAGC GGATATCACCTGTTGTATCTGGTCAACGGGGATTTCGACGGGCGAATCTTCGTGCACGTGGTGTGTGACGAGGCTACCGG GAATCTCGGGCTCGCGCGCTATCAGCTGACGACGATCCTCACCGAATTCGTCGAGGGCGACGATGAGCGCTGA
Upstream 100 bases:
>100_bases GTTCGCCGTGCAACTTTCGCCCGCCGTGTGTAGCGTCTGGCACCTGTAAGCCCTTGTGCGACAAGCGGGGGCAAATCCTC GGATGACAAGCGGTGACGCG
Downstream 100 bases:
>100_bases CCTCGCCGTCGCGCTGCGCCGACTGGAACAGGAGGGACGCACCGGCGTGCTGCGGGCGGGGGACGGCGAATTCCACCTCG CCGACGGGGTCATCGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MLGIDGCLKRIMDIPGARSVTMVDGASGLAIAAAGRHDLVDQHEDAAGTTDVVRAVLGCPALANGPGGDDVCEIIVCGSS GYHLLYLVNGDFDGRIFVHVVCDEATGNLGLARYQLTTILTEFVEGDDER
Sequences:
>Translated_130_residues MLGIDGCLKRIMDIPGARSVTMVDGASGLAIAAAGRHDLVDQHEDAAGTTDVVRAVLGCPALANGPGGDDVCEIIVCGSS GYHLLYLVNGDFDGRIFVHVVCDEATGNLGLARYQLTTILTEFVEGDDER >Mature_130_residues MLGIDGCLKRIMDIPGARSVTMVDGASGLAIAAAGRHDLVDQHEDAAGTTDVVRAVLGCPALANGPGGDDVCEIIVCGSS GYHLLYLVNGDFDGRIFVHVVCDEATGNLGLARYQLTTILTEFVEGDDER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13577; Mature: 13577
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGIDGCLKRIMDIPGARSVTMVDGASGLAIAAAGRHDLVDQHEDAAGTTDVVRAVLGCP CCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC ALANGPGGDDVCEIIVCGSSGYHLLYLVNGDFDGRIFVHVVCDEATGNLGLARYQLTTIL CCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHH TEFVEGDDER HHHHCCCCCC >Mature Secondary Structure MLGIDGCLKRIMDIPGARSVTMVDGASGLAIAAAGRHDLVDQHEDAAGTTDVVRAVLGCP CCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC ALANGPGGDDVCEIIVCGSSGYHLLYLVNGDFDGRIFVHVVCDEATGNLGLARYQLTTIL CCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHH TEFVEGDDER HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA