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The map label for this gene is 54026749

Identifier: 54026749

GI number: 54026749

Start: 4986146

End: 4987321

Strand: Reverse

Name: 54026749

Synonym: nfa47750

Alternate gene names: NA

Gene position: 4987321-4986146 (Counterclockwise)

Preceding gene: 54026752

Following gene: 54026747

Centisome position: 82.83

GC content: 66.75

Gene sequence:

>1176_bases
ATGGGTGCTCTCCACGCCGGTCAGCGCGTCGCGGCGGAGCGAAAGCTCGCCGGCCTCACACAGCGCCAACTCGCAAGTCG
TGCAAACTATTCGCTCGGTTTGGTGAAGGCGGTCGAGCAAGGCCGGGAACCTGCGAGCCCCGCCTTTCTGGCCGCCGCTG
CAAGGGTCCTACGCGTCGAACCCGAGCGGCTGACCGGCGAGCCCTACCGGGATCTGATCGAGACCGACGGACCGCTGGAA
GGGGTGACGGAGCTGCGCGCGATCCTCACGGAGGGGCCCTACCTGGCCGCACTCGAGCCCGCGCCGCTCGACGAACTGCA
AAGGGAACTCGACGAGGTCGACCAGGCGTATCTGCAGGACCGGGGCCGGGATGCGTTGGCGCGGCTGCCCGAGCTGATCC
GCCAACTGCACGGAGCGCTGCGGGAAACCAGGGACACCACCAGGGTGTGGACGATGCTCGCGCAGGCGTGGGCCGCCGTG
GACCGGTCGACGCTGCAATACAACCTGGCAGGCTTCGGTCCCACGGTCCTCGACCGCCTCGATCATGCTGCCGAACGCGG
CGGCGACCCTCTCTACCGGACTCAAGCGCTCGTCAAGCGCGCTAGACGGTTGATGTACTTGGACCAGCACGTTGTCAGCC
TGGATCTGATCGAACGTGCGCTCGACAGTGTGCACGGTGACGGCGCGGGAGAGCGGGCTTTGCGCGGGTCCGCCCATCTG
ACCGGCGCGGTCATTGCCGCCCGGGGTTTCCGTCCTGACGTGGCCGAGGAACACTTGCGCGAAGCGCGTCGCCTCGCTGC
GCCCATGCGCAGCGAAACCAGCTTGTACGGAACTCTTTTCGGGCCGGTGAATGTCGGTATCCACACCACGGCAGTCGCCC
TGGATTCCGGTGATCCCGGACGAGCTGCCCGTGAAGGCGCGTCACTGGTGATTCCGGACGCTGTGGTGGCACGTCCCCGA
ATCGGCCATCACTGGCAGGACGTTGCACGCGCCTGGCTGCTCACCGGGAAACCCGACCTCGCATTGGATGCCCTCAACCG
GGCGCGCCGGGTCGCGCCCCAACAGACGAGAATGCACCCGAGCGTCCGTGAGACTGTTTTCGGAATCGCTGCAGCTCAGC
GTCGACAGAAGAACAGCGTTTCGAGCTTCGCCAGCTGGCTCGGCGTTCAGTTGTGA

Upstream 100 bases:

>100_bases
CCGGAGAACCGCAATCGAACCGGCGGCGGTACCGCCCTAGATTCGTGGGCTGTTCATCGATGAAGGGCCAAGCCGGGGCC
AGTCCGCCTATCGTGGATGC

Downstream 100 bases:

>100_bases
TTTTCGAGGATGTGCCGCCCACTCGTGCGGGCGGCTCGGACCGATGGATCGGCCCAGTGCAGCGCATATCCCAACCGTCG
GGCGAGCCGCCGCACCTGCG

Product: putative DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; Transcriptional Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MGALHAGQRVAAERKLAGLTQRQLASRANYSLGLVKAVEQGREPASPAFLAAAARVLRVEPERLTGEPYRDLIETDGPLE
GVTELRAILTEGPYLAALEPAPLDELQRELDEVDQAYLQDRGRDALARLPELIRQLHGALRETRDTTRVWTMLAQAWAAV
DRSTLQYNLAGFGPTVLDRLDHAAERGGDPLYRTQALVKRARRLMYLDQHVVSLDLIERALDSVHGDGAGERALRGSAHL
TGAVIAARGFRPDVAEEHLREARRLAAPMRSETSLYGTLFGPVNVGIHTTAVALDSGDPGRAAREGASLVIPDAVVARPR
IGHHWQDVARAWLLTGKPDLALDALNRARRVAPQQTRMHPSVRETVFGIAAAQRRQKNSVSSFASWLGVQL

Sequences:

>Translated_391_residues
MGALHAGQRVAAERKLAGLTQRQLASRANYSLGLVKAVEQGREPASPAFLAAAARVLRVEPERLTGEPYRDLIETDGPLE
GVTELRAILTEGPYLAALEPAPLDELQRELDEVDQAYLQDRGRDALARLPELIRQLHGALRETRDTTRVWTMLAQAWAAV
DRSTLQYNLAGFGPTVLDRLDHAAERGGDPLYRTQALVKRARRLMYLDQHVVSLDLIERALDSVHGDGAGERALRGSAHL
TGAVIAARGFRPDVAEEHLREARRLAAPMRSETSLYGTLFGPVNVGIHTTAVALDSGDPGRAAREGASLVIPDAVVARPR
IGHHWQDVARAWLLTGKPDLALDALNRARRVAPQQTRMHPSVRETVFGIAAAQRRQKNSVSSFASWLGVQL
>Mature_390_residues
GALHAGQRVAAERKLAGLTQRQLASRANYSLGLVKAVEQGREPASPAFLAAAARVLRVEPERLTGEPYRDLIETDGPLEG
VTELRAILTEGPYLAALEPAPLDELQRELDEVDQAYLQDRGRDALARLPELIRQLHGALRETRDTTRVWTMLAQAWAAVD
RSTLQYNLAGFGPTVLDRLDHAAERGGDPLYRTQALVKRARRLMYLDQHVVSLDLIERALDSVHGDGAGERALRGSAHLT
GAVIAARGFRPDVAEEHLREARRLAAPMRSETSLYGTLFGPVNVGIHTTAVALDSGDPGRAAREGASLVIPDAVVARPRI
GHHWQDVARAWLLTGKPDLALDALNRARRVAPQQTRMHPSVRETVFGIAAAQRRQKNSVSSFASWLGVQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42765; Mature: 42634

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALHAGQRVAAERKLAGLTQRQLASRANYSLGLVKAVEQGREPASPAFLAAAARVLRVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PERLTGEPYRDLIETDGPLEGVTELRAILTEGPYLAALEPAPLDELQRELDEVDQAYLQD
CHHHCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
RGRDALARLPELIRQLHGALRETRDTTRVWTMLAQAWAAVDRSTLQYNLAGFGPTVLDRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH
DHAAERGGDPLYRTQALVKRARRLMYLDQHVVSLDLIERALDSVHGDGAGERALRGSAHL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHH
TGAVIAARGFRPDVAEEHLREARRLAAPMRSETSLYGTLFGPVNVGIHTTAVALDSGDPG
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCEEEEEEEECCCCCC
RAAREGASLVIPDAVVARPRIGHHWQDVARAWLLTGKPDLALDALNRARRVAPQQTRMHP
CHHHCCCCEECCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCH
SVRETVFGIAAAQRRQKNSVSSFASWLGVQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GALHAGQRVAAERKLAGLTQRQLASRANYSLGLVKAVEQGREPASPAFLAAAARVLRVE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PERLTGEPYRDLIETDGPLEGVTELRAILTEGPYLAALEPAPLDELQRELDEVDQAYLQD
CHHHCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
RGRDALARLPELIRQLHGALRETRDTTRVWTMLAQAWAAVDRSTLQYNLAGFGPTVLDRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH
DHAAERGGDPLYRTQALVKRARRLMYLDQHVVSLDLIERALDSVHGDGAGERALRGSAHL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHH
TGAVIAARGFRPDVAEEHLREARRLAAPMRSETSLYGTLFGPVNVGIHTTAVALDSGDPG
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCEEEEEEEECCCCCC
RAAREGASLVIPDAVVARPRIGHHWQDVARAWLLTGKPDLALDALNRARRVAPQQTRMHP
CHHHCCCCEECCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCH
SVRETVFGIAAAQRRQKNSVSSFASWLGVQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA