| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is folP2 [H]
Identifier: 54026711
GI number: 54026711
Start: 4947722
End: 4948663
Strand: Reverse
Name: folP2 [H]
Synonym: nfa47370
Alternate gene names: 54026711
Gene position: 4948663-4947722 (Counterclockwise)
Preceding gene: 54026712
Following gene: 54026710
Centisome position: 82.19
GC content: 72.19
Gene sequence:
>942_bases GTGGTCATGTTCAGCCCGCCCGCAGCGCCGCTGCCCACCCTGTGCGGCAAGCCGGTCGCGACGGACCGGGCGCTGGTGAT GGCCATCGTCAACCGCACCCCGGACTCGTTCTACGACCGCGGCGCCACCTTCACCGACGAGGCCGCGATGGCCGCCGTCG ACCGCGCGGTCGCCGAGGGCGCCGACCTGGTGGACATCGGCGGGGTGAAGGCGGGCCCGGGCAGCGAGGTCGACGCCGCC GTGGACATCGGCGGGGTGAAGGCGGGCCCGGGCAGCGAGGTCGACGCCGCCGAGGAGACGCGGCGGGTGGTGCCGTTCGT GGCCGCCATCCGCGCCGCCTATCCCGACCTGCTGATCAGCGTCGACACCTGGCGTTCGGAGGTCGCGCGGGCCGCCGTGG CCGAGGGCGCCGACCTGATCAACGACACCTGGGCCGGCGCCGACCCGGAACTGGTGCGGGTGGCCGCCGAACACGGTGCG GGCATCGTGTGCAGCCACACCGGCGGCGCCGTTCCGCGCACCCGCCCGCACCGCGTCCGCTACGCCGACGTGGTGGCCGA GGTCACCGAGACCGTCGTGGCCGCCGCCGAGCGGGCGGCCGCGGCGGGCGTGCGCACGGACTCGATCCTCATCGATCCGA CCCACGATTTCGGCAAGAACACCTATCACGGGCTCGAACTGTTGCGGGGATTGGACGTTCTTGTAAACAGCGGGTGGCCG GTCCTGATGGCGCTGAGCAACAAGGACTTCATCGGGGAGACTCTAGGTGTCGGTCTTTCCGAACGACTGGAGGGCACATT GGCAGCAACGGCGTGGTCCGCCGCCGCGGGCGCCCGGGTCTTCCGCGTTCACGAGGTCGCGCACACGCGGCGGGTGGTGG ACATGATCGCCGCGATCCAGGGCATCCGGCCCCCCGCACGAACCCTGCGAGGTCTGGTATGA
Upstream 100 bases:
>100_bases CCGGACGGACCGACGGCTACGTGCCCGCCTACGACGACTACCCCGCCGAGGTGGCGGCCGGGCGCGCGCCGAAGAACTGA TCGGGGCCCTCGGTACAGTC
Downstream 100 bases:
>100_bases AAATCCAACACCGCGAGTCCGCCTGGGCGAGCACGAATACCTGGGACAACCCCGAATGGGCGGTCGAGGAGCTGATCGCC GCCAAGAACGGGCGCACCGT
Product: putative dihydropteroate synthase
Products: diphosphate; dihydropteroate [C]
Alternate protein names: DHPS 2; Dihydropteroate pyrophosphorylase 2 [H]
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MVMFSPPAAPLPTLCGKPVATDRALVMAIVNRTPDSFYDRGATFTDEAAMAAVDRAVAEGADLVDIGGVKAGPGSEVDAA VDIGGVKAGPGSEVDAAEETRRVVPFVAAIRAAYPDLLISVDTWRSEVARAAVAEGADLINDTWAGADPELVRVAAEHGA GIVCSHTGGAVPRTRPHRVRYADVVAEVTETVVAAAERAAAAGVRTDSILIDPTHDFGKNTYHGLELLRGLDVLVNSGWP VLMALSNKDFIGETLGVGLSERLEGTLAATAWSAAAGARVFRVHEVAHTRRVVDMIAAIQGIRPPARTLRGLV
Sequences:
>Translated_313_residues MVMFSPPAAPLPTLCGKPVATDRALVMAIVNRTPDSFYDRGATFTDEAAMAAVDRAVAEGADLVDIGGVKAGPGSEVDAA VDIGGVKAGPGSEVDAAEETRRVVPFVAAIRAAYPDLLISVDTWRSEVARAAVAEGADLINDTWAGADPELVRVAAEHGA GIVCSHTGGAVPRTRPHRVRYADVVAEVTETVVAAAERAAAAGVRTDSILIDPTHDFGKNTYHGLELLRGLDVLVNSGWP VLMALSNKDFIGETLGVGLSERLEGTLAATAWSAAAGARVFRVHEVAHTRRVVDMIAAIQGIRPPARTLRGLV >Mature_313_residues MVMFSPPAAPLPTLCGKPVATDRALVMAIVNRTPDSFYDRGATFTDEAAMAAVDRAVAEGADLVDIGGVKAGPGSEVDAA VDIGGVKAGPGSEVDAAEETRRVVPFVAAIRAAYPDLLISVDTWRSEVARAAVAEGADLINDTWAGADPELVRVAAEHGA GIVCSHTGGAVPRTRPHRVRYADVVAEVTETVVAAAERAAAAGVRTDSILIDPTHDFGKNTYHGLELLRGLDVLVNSGWP VLMALSNKDFIGETLGVGLSERLEGTLAATAWSAAAGARVFRVHEVAHTRRVVDMIAAIQGIRPPARTLRGLV
Specific function: Has very low affinity for the DHPS substrate 6- hydroxymethyl-7,8-dihydropterin-pyrophosphate, but can bind the inhibitor dapsone. Seems to lack dihydropteroate synthase activity, and does probably not function in folate metabolism [H]
COG id: COG0294
COG function: function code H; Dihydropteroate synthase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 pterin-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87082224, Length=272, Percent_Identity=36.0294117647059, Blast_Score=151, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6324073, Length=326, Percent_Identity=26.9938650306748, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006390 - InterPro: IPR011005 - InterPro: IPR000489 [H]
Pfam domain/function: PF00809 Pterin_bind [H]
EC number: 2.5.1.15 [C]
Molecular weight: Translated: 32608; Mature: 32608
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50972 PTERIN_BINDING ; PS00792 DHPS_1 ; PS00793 DHPS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMFSPPAAPLPTLCGKPVATDRALVMAIVNRTPDSFYDRGATFTDEAAMAAVDRAVAEG CEEECCCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCC ADLVDIGGVKAGPGSEVDAAVDIGGVKAGPGSEVDAAEETRRVVPFVAAIRAAYPDLLIS CCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEE VDTWRSEVARAAVAEGADLINDTWAGADPELVRVAAEHGAGIVCSHTGGAVPRTRPHRVR HHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHH YADVVAEVTETVVAAAERAAAAGVRTDSILIDPTHDFGKNTYHGLELLRGLDVLVNSGWP HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHCCCCC VLMALSNKDFIGETLGVGLSERLEGTLAATAWSAAAGARVFRVHEVAHTRRVVDMIAAIQ EEEEECCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH GIRPPARTLRGLV CCCCHHHHHCCCC >Mature Secondary Structure MVMFSPPAAPLPTLCGKPVATDRALVMAIVNRTPDSFYDRGATFTDEAAMAAVDRAVAEG CEEECCCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCC ADLVDIGGVKAGPGSEVDAAVDIGGVKAGPGSEVDAAEETRRVVPFVAAIRAAYPDLLIS CCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEE VDTWRSEVARAAVAEGADLINDTWAGADPELVRVAAEHGAGIVCSHTGGAVPRTRPHRVR HHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHH YADVVAEVTETVVAAAERAAAAGVRTDSILIDPTHDFGKNTYHGLELLRGLDVLVNSGWP HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHCCCCC VLMALSNKDFIGETLGVGLSERLEGTLAATAWSAAAGARVFRVHEVAHTRRVVDMIAAIQ EEEEECCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH GIRPPARTLRGLV CCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.0015 {4-aminobenzoate}} [C]
Substrates: @AMIN04*Amino-hydroxy-hydroxymethyldihydropteridinediphosphate!; aminobenzoate [C]
Specific reaction: @AMIN04.txt*Amino-hydroxy-hydroxymethyldihydropteridinediphosphate! + aminobenzoate = diphosphate + dihydropteroate [C]
General reaction: Aryl group transfer [C]
Inhibitor: Sulfaguanidine; Sulfanilamide; Sulfathiazole; Sulfonamides [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]