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The map label for this gene is 54026702

Identifier: 54026702

GI number: 54026702

Start: 4939120

End: 4939752

Strand: Reverse

Name: 54026702

Synonym: nfa47280

Alternate gene names: NA

Gene position: 4939752-4939120 (Counterclockwise)

Preceding gene: 54026710

Following gene: 54026699

Centisome position: 82.04

GC content: 72.2

Gene sequence:

>633_bases
GTGGCATCGAACCTGGAGCGAAATCTCGCCTACGTGGAGGAATCCGTCGTGGAGGACGAGATCCTCGTCAGCGCGCGCGA
GCGGGCCACCGAACTCGGTGCGGCACCCGTGCCGCCCTCGGTCGGCGCCCTGCTCAGCATGTACGCCCAGCTGCTCGGCG
CACGGGCGGTCGTCGAGGTCGGCACCGGCGCGGGCATCAGCGGATTGTGGCTGCTGGACGGCATGCGCGAGGACGGGACG
CTGACCACGATCGATTCCGAACCCGAGCATCAGCGCGCGGCCAAGGAGGCCTTCCGGGCCGCCGACATCCCACCCGCGCG
CACCAGGTTGATCAACGGCCGCGCCCTCGACGTGCTGCCGCGGCTGGCCGACGGCGCCTACGATCTGGTCTTCGTCGACG
CCGCGCCGCTGGAACATCCCGAGTACGTGGCCCAGGGCGTCCGGCTGCTCCGCGAGGGCGGCGCGATCATCCTGCACAAC
GCGTTGCTGGGCGGCCGGGTGCCCGATCCCACCCAGCGCGACGCGGTCACCCAGGCGGTGCGCTCGGCCACCCGCGCCAT
CGCCGAGGATCCGCGGCTGACCTGCGTGCTGATTCCCGTGGGCGACGGCCTGCTCTGCGCCTCACGCGGCTGA

Upstream 100 bases:

>100_bases
CTGGATATGGAGATACTGAGGGACAGCTGAGAAAACCGGCGGCACCGGTTTGCTGTTGTCGTGACGCCGATCGCGCGTCC
GTCCCATTAGCCTCATACCC

Downstream 100 bases:

>100_bases
ATTCTGCGCCGCGGTTCTGCGCCCACGCGAGTCCTCGTCGCCCACGCGGGTTCTCGGAGCCTCGCGCGACTGTCCCCGTC
CGCGCGGCGAATTGCCCTGT

Product: putative O-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MASNLERNLAYVEESVVEDEILVSARERATELGAAPVPPSVGALLSMYAQLLGARAVVEVGTGAGISGLWLLDGMREDGT
LTTIDSEPEHQRAAKEAFRAADIPPARTRLINGRALDVLPRLADGAYDLVFVDAAPLEHPEYVAQGVRLLREGGAIILHN
ALLGGRVPDPTQRDAVTQAVRSATRAIAEDPRLTCVLIPVGDGLLCASRG

Sequences:

>Translated_210_residues
MASNLERNLAYVEESVVEDEILVSARERATELGAAPVPPSVGALLSMYAQLLGARAVVEVGTGAGISGLWLLDGMREDGT
LTTIDSEPEHQRAAKEAFRAADIPPARTRLINGRALDVLPRLADGAYDLVFVDAAPLEHPEYVAQGVRLLREGGAIILHN
ALLGGRVPDPTQRDAVTQAVRSATRAIAEDPRLTCVLIPVGDGLLCASRG
>Mature_209_residues
ASNLERNLAYVEESVVEDEILVSARERATELGAAPVPPSVGALLSMYAQLLGARAVVEVGTGAGISGLWLLDGMREDGTL
TTIDSEPEHQRAAKEAFRAADIPPARTRLINGRALDVLPRLADGAYDLVFVDAAPLEHPEYVAQGVRLLREGGAIILHNA
LLGGRVPDPTQRDAVTQAVRSATRAIAEDPRLTCVLIPVGDGLLCASRG

Specific function: Unknown

COG id: COG4122

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI72001127, Length=178, Percent_Identity=33.1460674157303, Blast_Score=85, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17565612, Length=178, Percent_Identity=30.3370786516854, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25148771, Length=217, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI72001028, Length=205, Percent_Identity=29.7560975609756, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002935 [H]

Pfam domain/function: PF01596 Methyltransf_3 [H]

EC number: NA

Molecular weight: Translated: 22220; Mature: 22088

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNLERNLAYVEESVVEDEILVSARERATELGAAPVPPSVGALLSMYAQLLGARAVVEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEE
GTGAGISGLWLLDGMREDGTLTTIDSEPEHQRAAKEAFRAADIPPARTRLINGRALDVLP
CCCCCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHEECCCHHHHHH
RLADGAYDLVFVDAAPLEHPEYVAQGVRLLREGGAIILHNALLGGRVPDPTQRDAVTQAV
HHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECHHHCCCCCCCCHHHHHHHHH
RSATRAIAEDPRLTCVLIPVGDGLLCASRG
HHHHHHHHCCCCEEEEEEECCCCEEECCCC
>Mature Secondary Structure 
ASNLERNLAYVEESVVEDEILVSARERATELGAAPVPPSVGALLSMYAQLLGARAVVEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEE
GTGAGISGLWLLDGMREDGTLTTIDSEPEHQRAAKEAFRAADIPPARTRLINGRALDVLP
CCCCCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHEECCCHHHHHH
RLADGAYDLVFVDAAPLEHPEYVAQGVRLLREGGAIILHNALLGGRVPDPTQRDAVTQAV
HHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECHHHCCCCCCCCHHHHHHHHH
RSATRAIAEDPRLTCVLIPVGDGLLCASRG
HHHHHHHHCCCCEEEEEEECCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA