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The map label for this gene is 54026681

Identifier: 54026681

GI number: 54026681

Start: 4919265

End: 4920149

Strand: Reverse

Name: 54026681

Synonym: nfa47080

Alternate gene names: NA

Gene position: 4920149-4919265 (Counterclockwise)

Preceding gene: 54026682

Following gene: 54026680

Centisome position: 81.71

GC content: 75.93

Gene sequence:

>885_bases
ATGCCTTCCACCGCGCCGCGGCGGGTGCTCGCCCGGATGCTCGTCGCCGCGCTGGCGGTGTTCGCGGTGTCGTGCGGGAG
CGCCGAGGACGAACCGGTGTTCGTGGTCGGCGCGGGGGACAGCGCCGAATCCCGGGTGCTGGCCGAGATCTACGCGGGCG
CGCTCGCCCGCACCGGCCTGCCGGTGCGGGTGCGGACCGGACTGGGGGACCGGGCGGGCACGCTGGCCGCGCTGGACGCG
GGCGCCGTCGGACTGGTCGGCGAGCACACCGGTGCGCTGCTCGCGGCGTTCGACGGCACCGCGGAGGTCACGACTCCGGC
CGAGGTCGGCACCGCGCTGAATCGTTCCCTGCCCGAGGGATTGGTGGTCGCCGACCCGGCCGAGAGCGCCGACCTGCGCC
CCCGCCTGCTCGTCGAGCCGGTGGCGGCTCGTCGTGACGGCCTCGACTCGGTGCGCGCGCTGATCCCGCGCTGCCCGGCG
ACCACGGCCGGTGTCGCGACGGTGCCCGGCCTGCTGCCCCCCGGCGCCGCGATCCGGGTGGCGGAGTGCGAGTTCGCCGC
CGTCACGTCCTTCCCGTCACCGGAGGCGCTGGTGCAGGCGGTGCGCACCGGCGTGGTCGGCGTCGGCGTCCTGACCGGCC
CGCCCGAACTCGTCCCCGCCGCCGACGGACTGACCGTGCTCGCGGACGAGGACTTCGCGGTGCGCGCGGAGAACGTCGTC
CCCCTGCTGCGCAAGGGCGTGCTCGACGACCAGCGGACGCGGAAACTCAACTACGTCGCGGGTGAGCTGACCACCGCGGA
ACTCGTCGAGCTGGTCCGCGCCGTCGGCACCGGCAGCGCTCCTGCCGAGTCGGCCCGCCAGTGGCTCGACGCGCACGGAC
TCTGA

Upstream 100 bases:

>100_bases
CGGTGCTGTCCGGGCCGGGCGGCGGTAGATTCTGCACGAGCCCGTCCCCGGCCGGGCGGGTCCTTGGCCGTTCCCGACTA
CGGAGAGTTGGTGTCGCCGT

Downstream 100 bases:

>100_bases
TCGACGCATCGCCGCCGGCGCGCGAGGCCCGGATCACATTCGGGCCCCTTGTCGGCGCATCGGCCGTCGCCGTATATTCC
ACGTGGAGTATTTCGTGTGG

Product: putative transporter substrate-binding protein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MPSTAPRRVLARMLVAALAVFAVSCGSAEDEPVFVVGAGDSAESRVLAEIYAGALARTGLPVRVRTGLGDRAGTLAALDA
GAVGLVGEHTGALLAAFDGTAEVTTPAEVGTALNRSLPEGLVVADPAESADLRPRLLVEPVAARRDGLDSVRALIPRCPA
TTAGVATVPGLLPPGAAIRVAECEFAAVTSFPSPEALVQAVRTGVVGVGVLTGPPELVPAADGLTVLADEDFAVRAENVV
PLLRKGVLDDQRTRKLNYVAGELTTAELVELVRAVGTGSAPAESARQWLDAHGL

Sequences:

>Translated_294_residues
MPSTAPRRVLARMLVAALAVFAVSCGSAEDEPVFVVGAGDSAESRVLAEIYAGALARTGLPVRVRTGLGDRAGTLAALDA
GAVGLVGEHTGALLAAFDGTAEVTTPAEVGTALNRSLPEGLVVADPAESADLRPRLLVEPVAARRDGLDSVRALIPRCPA
TTAGVATVPGLLPPGAAIRVAECEFAAVTSFPSPEALVQAVRTGVVGVGVLTGPPELVPAADGLTVLADEDFAVRAENVV
PLLRKGVLDDQRTRKLNYVAGELTTAELVELVRAVGTGSAPAESARQWLDAHGL
>Mature_293_residues
PSTAPRRVLARMLVAALAVFAVSCGSAEDEPVFVVGAGDSAESRVLAEIYAGALARTGLPVRVRTGLGDRAGTLAALDAG
AVGLVGEHTGALLAAFDGTAEVTTPAEVGTALNRSLPEGLVVADPAESADLRPRLLVEPVAARRDGLDSVRALIPRCPAT
TAGVATVPGLLPPGAAIRVAECEFAAVTSFPSPEALVQAVRTGVVGVGVLTGPPELVPAADGLTVLADEDFAVRAENVVP
LLRKGVLDDQRTRKLNYVAGELTTAELVELVRAVGTGSAPAESARQWLDAHGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29880; Mature: 29749

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTAPRRVLARMLVAALAVFAVSCGSAEDEPVFVVGAGDSAESRVLAEIYAGALARTGL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
PVRVRTGLGDRAGTLAALDAGAVGLVGEHTGALLAAFDGTAEVTTPAEVGTALNRSLPEG
CEEEECCCCCCCCCEEEECCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCC
LVVADPAESADLRPRLLVEPVAARRDGLDSVRALIPRCPATTAGVATVPGLLPPGAAIRV
EEEECCCCCCCCCCHHHHCHHHHHHCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEE
AECEFAAVTSFPSPEALVQAVRTGVVGVGVLTGPPELVPAADGLTVLADEDFAVRAENVV
ECCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEHHHHH
PLLRKGVLDDQRTRKLNYVAGELTTAELVELVRAVGTGSAPAESARQWLDAHGL
HHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PSTAPRRVLARMLVAALAVFAVSCGSAEDEPVFVVGAGDSAESRVLAEIYAGALARTGL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
PVRVRTGLGDRAGTLAALDAGAVGLVGEHTGALLAAFDGTAEVTTPAEVGTALNRSLPEG
CEEEECCCCCCCCCEEEECCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCC
LVVADPAESADLRPRLLVEPVAARRDGLDSVRALIPRCPATTAGVATVPGLLPPGAAIRV
EEEECCCCCCCCCCHHHHCHHHHHHCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEE
AECEFAAVTSFPSPEALVQAVRTGVVGVGVLTGPPELVPAADGLTVLADEDFAVRAENVV
ECCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEHHHHH
PLLRKGVLDDQRTRKLNYVAGELTTAELVELVRAVGTGSAPAESARQWLDAHGL
HHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA