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The map label for this gene is 54026680

Identifier: 54026680

GI number: 54026680

Start: 4918387

End: 4919097

Strand: Reverse

Name: 54026680

Synonym: nfa47070

Alternate gene names: NA

Gene position: 4919097-4918387 (Counterclockwise)

Preceding gene: 54026681

Following gene: 54026679

Centisome position: 81.7

GC content: 74.96

Gene sequence:

>711_bases
ATGGGGCAGGGGCGCGGCAAGCCGACCGCACTGGCGGTCTCGGTGCTCGCGCTGCTCGAGGAGCGGCCCATGCATCCCTA
CGAGATGTATCAGACGCTGATCGAGCGCCGAGAGGACATGCTGGTCAAGGTCCGCCCCGGCTCGCTCTACCACACGGTGG
CGCGGTTGGCCGATCAGGAACTGGTGCGCGCCGAGGGCGTGGACCGCGCGGGCAACCGTCCCGAGCGCACCACCTACCGC
ATCACTGCGCGGGGCCGCGCCGCGCTGCGCGACCGGATCACCGACATCCTGCGTGCCCCGGTGCCCGAGTACCCCGAGTT
CCCGCTCGCCCTCGCCGAGGCACACAACCTGCCCGCCGAGGAGGTGCTCGCCCTGCTGGGTGAGCGCGTCGCCCACCTCG
ACCACGACCTGGCCGATCTGGACGCGATGATCGCCTGGGCCGAGCGCAAGGGCATCGCCCGGCGCTACTGGCTCGTCCTG
CCGTACCTGCGCGCGACCGTGCGGGCGCAGCGGGACTGGCTCGCCGGCTTCACCGCCGAGCTCGCCGCGGGCGAGCCGGC
CTGGGAGGAGTTCGAGCCGACCGGCGCGCGCCGCACGCCCGCGCCGGCCACCCCGTGGGACGGCGACGAGGCCGACCCGC
CCCCGGCGCCGCGCCGCGCGCACGCCGCCCCGCCGCCATCCCCCTCGATCGTCCAGATCGCCCCCAGATAG

Upstream 100 bases:

>100_bases
CGCCGTATATTCCACGTGGAGTATTTCGTGTGGAGTATGTCGGTGGACCGCGGAATGATCGGTGGCGCATCCGGCGCGGA
CGAGACGGAAGGTGGCGAGA

Downstream 100 bases:

>100_bases
GAAGCACTTCCGTGTCGACCCAACGCAATCCGTGGCTGGCGCTGTTCGCGCTGGTCGTCGGCTTCTTCATGATCCTGTTG
GACATGACCATCGTCGCGGT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator PadR-Like Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; PadR Transcriptional Regulator; Padr Family Transcriptional Regulator; Ankyrin-Like Protein; MtrY Protein

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MGQGRGKPTALAVSVLALLEERPMHPYEMYQTLIERREDMLVKVRPGSLYHTVARLADQELVRAEGVDRAGNRPERTTYR
ITARGRAALRDRITDILRAPVPEYPEFPLALAEAHNLPAEEVLALLGERVAHLDHDLADLDAMIAWAERKGIARRYWLVL
PYLRATVRAQRDWLAGFTAELAAGEPAWEEFEPTGARRTPAPATPWDGDEADPPPAPRRAHAAPPPSPSIVQIAPR

Sequences:

>Translated_236_residues
MGQGRGKPTALAVSVLALLEERPMHPYEMYQTLIERREDMLVKVRPGSLYHTVARLADQELVRAEGVDRAGNRPERTTYR
ITARGRAALRDRITDILRAPVPEYPEFPLALAEAHNLPAEEVLALLGERVAHLDHDLADLDAMIAWAERKGIARRYWLVL
PYLRATVRAQRDWLAGFTAELAAGEPAWEEFEPTGARRTPAPATPWDGDEADPPPAPRRAHAAPPPSPSIVQIAPR
>Mature_235_residues
GQGRGKPTALAVSVLALLEERPMHPYEMYQTLIERREDMLVKVRPGSLYHTVARLADQELVRAEGVDRAGNRPERTTYRI
TARGRAALRDRITDILRAPVPEYPEFPLALAEAHNLPAEEVLALLGERVAHLDHDLADLDAMIAWAERKGIARRYWLVLP
YLRATVRAQRDWLAGFTAELAAGEPAWEEFEPTGARRTPAPATPWDGDEADPPPAPRRAHAAPPPSPSIVQIAPR

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26301; Mature: 26170

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQGRGKPTALAVSVLALLEERPMHPYEMYQTLIERREDMLVKVRPGSLYHTVARLADQE
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHH
LVRAEGVDRAGNRPERTTYRITARGRAALRDRITDILRAPVPEYPEFPLALAEAHNLPAE
HHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHH
EVLALLGERVAHLDHDLADLDAMIAWAERKGIARRYWLVLPYLRATVRAQRDWLAGFTAE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAGEPAWEEFEPTGARRTPAPATPWDGDEADPPPAPRRAHAAPPPSPSIVQIAPR
HHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure 
GQGRGKPTALAVSVLALLEERPMHPYEMYQTLIERREDMLVKVRPGSLYHTVARLADQE
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHH
LVRAEGVDRAGNRPERTTYRITARGRAALRDRITDILRAPVPEYPEFPLALAEAHNLPAE
HHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHH
EVLALLGERVAHLDHDLADLDAMIAWAERKGIARRYWLVLPYLRATVRAQRDWLAGFTAE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAGEPAWEEFEPTGARRTPAPATPWDGDEADPPPAPRRAHAAPPPSPSIVQIAPR
HHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA