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The map label for this gene is 54026603

Identifier: 54026603

GI number: 54026603

Start: 4817706

End: 4819091

Strand: Reverse

Name: 54026603

Synonym: nfa46300

Alternate gene names: NA

Gene position: 4819091-4817706 (Counterclockwise)

Preceding gene: 54026604

Following gene: 54026602

Centisome position: 80.04

GC content: 74.53

Gene sequence:

>1386_bases
ATGTTCGCCGCACTGTTCACCCACCGCGACTACCGCCGACTGTTCGCCGCCCAGATCTCCGCCCTGTTCGGCACCGGATC
GACCACCGTGGCGCTCGGTCTGCTCGCCTACGAACTCGCCGGCGCCGACGCCGCCGTCGTGCTCGGCACCGCGCTCACGG
TCAAGATGCTGGTCTACGTGACGGTCGCCCCGGTCGCAGGCGCCGTGGCCCACCGGCTGCCGCGGCGGTCGTTCCTGGTC
GCGCTCAACATGATCCGCGCCGCGGTCGTGCCCGCGCTGCCCTTCGTCGACCAGGTCTGGCAGATCTACGTCCTGATCGC
GGTGCTGCAGACCGCCTCGGCCGCGTTCACCCCCACCTACCAGGCCGTGATCCCCGACATCCTGCCCGACGAACGCGACT
ACACCAGGGCGCTGTCGGCCGCGCAGCTCGCCGCGACCATGGAGACACTGCTGAGCCCGCTGCTGGCCGCGGCCGCCCTG
GCCGTCATCGGACTCCACTGGCTGTTCCTCGGCACCGCGGTCGGCTTCGCGATCTCGGCCGCGCTCGTGCTCGGCACCCG
GATCCCGGACGCGAAGGCCGCCACCGCGGCGGGTTTCGGCGCCCGCCTGGCCTCGGGCGCCCGGATCTTCCTCGCCACAC
CGCGCCTGCGCGGACTGCTCGCCCTGAATGTCGTGGTGGCCGCGGCGGGGTCGGTGGTCATGGTCAACACCGTCAACTAC
GCCCGCGACACCCTCGGCGGCGACCAGGCCGACGTGGCGGTGCTGTTGGCGGCCAACGGATTGGGCACCATGCTCGCCGC
CCTGCTGCTGCCCCGCGTCCTCGACCGGCGCGGCGCCCGCCCGGTGCTGCTGGCCGGGGCGGGCGTCCTGGTGACCGGCC
TGGCCGCCGCCGTCGCGCTGTCGGCGGCCGGGAGCGGGACCTGGCGGTGGGGCGCGGCACTCGCGGTCTGGGCGCTCGTC
GGCGCGGGAACCGCGGCGGTGCTCACGCCCACCGGGCAGGTGCTGCGCCGCTCGGCCCGGCCCGCCGACCGCCCCGCCCT
CTTCGCCGCGCAGTTCTCGCTCTCGCACCTGGCCTGGCTGTTCACCTACCCGCTCACCGGGTGGTTGTCGACCACCGCCG
GGCTCACTACCACCTGGCTGACGCTGGCCGTGATCGCCAGCGGCGCCGCCGTCCTCGCCGCCCGGCTCTGGCCGCGCCAC
GACCCGGCCGAGCTGACCCACCTGCACGAGGCGGGAACCGTCGACCCCGCGCTGCTCGCCGACGCGATCCGGGTGAACGA
CCGCTACGTCCAGCACACCCACGTCTACGTCGCGGCGAGCCGTTCGACCGAGATCGATGCGGCGCACCCGCGGTGGCCGC
GACGCGAGCACGCGAGGGCCGCGTGA

Upstream 100 bases:

>100_bases
GAAAGCCGCCGCGCCACAACCCGAATGAGCCGGACTCGGGCGGGCAGCCCACCAGGATGCCCGTCCGAGCCGCCCACCCC
GCGCCGGTCGAGGAGCAATC

Downstream 100 bases:

>100_bases
GCGAGGCGATCCCGGCGCGTCGTGGCCGGGACGTGCCCGGCCGCCTACCGTGGGTGGCATGGTGGATGTGGCGGTGGTGG
GTTCCGGGCCGAACGGTCTC

Product: putative transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Nickel Resistance Protein; NreB Protein; MFS Ni2+ Efflux Pump NreB; Transporter Facilitator Family; MFS Transporter; MFS Family Transporter Protein; NrbE-Like Protein; NcrA-Like Facilitator Superfamily Permease; Nickel-Resistant Pritein NcrA; Integral Membrane Protein; Nickel Resistance; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MFAALFTHRDYRRLFAAQISALFGTGSTTVALGLLAYELAGADAAVVLGTALTVKMLVYVTVAPVAGAVAHRLPRRSFLV
ALNMIRAAVVPALPFVDQVWQIYVLIAVLQTASAAFTPTYQAVIPDILPDERDYTRALSAAQLAATMETLLSPLLAAAAL
AVIGLHWLFLGTAVGFAISAALVLGTRIPDAKAATAAGFGARLASGARIFLATPRLRGLLALNVVVAAAGSVVMVNTVNY
ARDTLGGDQADVAVLLAANGLGTMLAALLLPRVLDRRGARPVLLAGAGVLVTGLAAAVALSAAGSGTWRWGAALAVWALV
GAGTAAVLTPTGQVLRRSARPADRPALFAAQFSLSHLAWLFTYPLTGWLSTTAGLTTTWLTLAVIASGAAVLAARLWPRH
DPAELTHLHEAGTVDPALLADAIRVNDRYVQHTHVYVAASRSTEIDAAHPRWPRREHARAA

Sequences:

>Translated_461_residues
MFAALFTHRDYRRLFAAQISALFGTGSTTVALGLLAYELAGADAAVVLGTALTVKMLVYVTVAPVAGAVAHRLPRRSFLV
ALNMIRAAVVPALPFVDQVWQIYVLIAVLQTASAAFTPTYQAVIPDILPDERDYTRALSAAQLAATMETLLSPLLAAAAL
AVIGLHWLFLGTAVGFAISAALVLGTRIPDAKAATAAGFGARLASGARIFLATPRLRGLLALNVVVAAAGSVVMVNTVNY
ARDTLGGDQADVAVLLAANGLGTMLAALLLPRVLDRRGARPVLLAGAGVLVTGLAAAVALSAAGSGTWRWGAALAVWALV
GAGTAAVLTPTGQVLRRSARPADRPALFAAQFSLSHLAWLFTYPLTGWLSTTAGLTTTWLTLAVIASGAAVLAARLWPRH
DPAELTHLHEAGTVDPALLADAIRVNDRYVQHTHVYVAASRSTEIDAAHPRWPRREHARAA
>Mature_461_residues
MFAALFTHRDYRRLFAAQISALFGTGSTTVALGLLAYELAGADAAVVLGTALTVKMLVYVTVAPVAGAVAHRLPRRSFLV
ALNMIRAAVVPALPFVDQVWQIYVLIAVLQTASAAFTPTYQAVIPDILPDERDYTRALSAAQLAATMETLLSPLLAAAAL
AVIGLHWLFLGTAVGFAISAALVLGTRIPDAKAATAAGFGARLASGARIFLATPRLRGLLALNVVVAAAGSVVMVNTVNY
ARDTLGGDQADVAVLLAANGLGTMLAALLLPRVLDRRGARPVLLAGAGVLVTGLAAAVALSAAGSGTWRWGAALAVWALV
GAGTAAVLTPTGQVLRRSARPADRPALFAAQFSLSHLAWLFTYPLTGWLSTTAGLTTTWLTLAVIASGAAVLAARLWPRH
DPAELTHLHEAGTVDPALLADAIRVNDRYVQHTHVYVAASRSTEIDAAHPRWPRREHARAA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48071; Mature: 48071

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAALFTHRDYRRLFAAQISALFGTGSTTVALGLLAYELAGADAAVVLGTALTVKMLVYV
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TVAPVAGAVAHRLPRRSFLVALNMIRAAVVPALPFVDQVWQIYVLIAVLQTASAAFTPTY
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QAVIPDILPDERDYTRALSAAQLAATMETLLSPLLAAAALAVIGLHWLFLGTAVGFAISA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVLGTRIPDAKAATAAGFGARLASGARIFLATPRLRGLLALNVVVAAAGSVVMVNTVNY
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHH
ARDTLGGDQADVAVLLAANGLGTMLAALLLPRVLDRRGARPVLLAGAGVLVTGLAAAVAL
HHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
SAAGSGTWRWGAALAVWALVGAGTAAVLTPTGQVLRRSARPADRPALFAAQFSLSHLAWL
HCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FTYPLTGWLSTTAGLTTTWLTLAVIASGAAVLAARLWPRHDPAELTHLHEAGTVDPALLA
HHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHH
DAIRVNDRYVQHTHVYVAASRSTEIDAAHPRWPRREHARAA
HHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHCCCCC
>Mature Secondary Structure
MFAALFTHRDYRRLFAAQISALFGTGSTTVALGLLAYELAGADAAVVLGTALTVKMLVYV
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TVAPVAGAVAHRLPRRSFLVALNMIRAAVVPALPFVDQVWQIYVLIAVLQTASAAFTPTY
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QAVIPDILPDERDYTRALSAAQLAATMETLLSPLLAAAALAVIGLHWLFLGTAVGFAISA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVLGTRIPDAKAATAAGFGARLASGARIFLATPRLRGLLALNVVVAAAGSVVMVNTVNY
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHH
ARDTLGGDQADVAVLLAANGLGTMLAALLLPRVLDRRGARPVLLAGAGVLVTGLAAAVAL
HHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
SAAGSGTWRWGAALAVWALVGAGTAAVLTPTGQVLRRSARPADRPALFAAQFSLSHLAWL
HCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FTYPLTGWLSTTAGLTTTWLTLAVIASGAAVLAARLWPRHDPAELTHLHEAGTVDPALLA
HHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHH
DAIRVNDRYVQHTHVYVAASRSTEIDAAHPRWPRREHARAA
HHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA