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The map label for this gene is 54026588

Identifier: 54026588

GI number: 54026588

Start: 4803938

End: 4804573

Strand: Reverse

Name: 54026588

Synonym: nfa46150

Alternate gene names: NA

Gene position: 4804573-4803938 (Counterclockwise)

Preceding gene: 54026589

Following gene: 54026587

Centisome position: 79.79

GC content: 73.74

Gene sequence:

>636_bases
ATGCCGAGCGCAGGCCGCAGCGCCCCCGAGCCGCGCATGCCGTACCAGGAGGCGGCGCGCGAACTGTTGCGCGCCTCGAT
CCTGGACGCCATGCGCGGCCTGCTCACCGAGCGGGACTGGGCCAAGATCACCCTGGCCGACGTGGCGGGCCGGGCGGGGG
TGAGCAGGCAGACGCTCTACAACGAGTTCGGATCGCGCGCCGGGCTGGCCCAGGCCTACGCGCTGCGCCTCGCCGACGAT
CTGGTCGATCACGTGCGCGCGGCGGTGACGGGCAACGTCGGCGACGCCAGGGCCGCCTTTCGCGAGGGCCTGTCCGGCTT
CTTCCTCGATTCGGCGGCCGACCCGCTGGTGCGCTCGCTGCTGGCCGGTGAGGCCAAGCCGGACCTGCTGCGGCTGATCA
CCCTCGACGCGGGCCCGCTGGTCGAGCACGCCACCGACCGGCTCGCGGCGGTCTTCGAGCACAGCTGGGTCGCGGCGACG
GCGGCGCAGTCCCAGGTGGTCGCGCACGCGCTGGTTCGCATCGCGTTGAGCTACATCCCGAATCCCCCCGGACCCGGCCG
CAACGCGCCCGCCGAGCTCGCCGAGTTGCTGGCCCCCTATGTCGAGGGCATCCTCGCCGCCAGGGGAGTGCGCTAG

Upstream 100 bases:

>100_bases
TGCCCGGATTGCGGTGCGGCGAAGTCGGATTTCTTCATGGTCGAGATCGAACGGTCGTGACGTTTTGACTGCGCAGGGCG
CCCGTGCCACGCTCGCGGGT

Downstream 100 bases:

>100_bases
GGGTTTCTCCGACCGCCCATCAGGGTTTGCTGGCCGGATGCCGTGCACTCGATCACAGAACGCGGATTTGACATACCAAC
CGTGCGGAATGTAACCGTGG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Transcriptional Regulatory Protein; TetR-Family Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MPSAGRSAPEPRMPYQEAARELLRASILDAMRGLLTERDWAKITLADVAGRAGVSRQTLYNEFGSRAGLAQAYALRLADD
LVDHVRAAVTGNVGDARAAFREGLSGFFLDSAADPLVRSLLAGEAKPDLLRLITLDAGPLVEHATDRLAAVFEHSWVAAT
AAQSQVVAHALVRIALSYIPNPPGPGRNAPAELAELLAPYVEGILAARGVR

Sequences:

>Translated_211_residues
MPSAGRSAPEPRMPYQEAARELLRASILDAMRGLLTERDWAKITLADVAGRAGVSRQTLYNEFGSRAGLAQAYALRLADD
LVDHVRAAVTGNVGDARAAFREGLSGFFLDSAADPLVRSLLAGEAKPDLLRLITLDAGPLVEHATDRLAAVFEHSWVAAT
AAQSQVVAHALVRIALSYIPNPPGPGRNAPAELAELLAPYVEGILAARGVR
>Mature_210_residues
PSAGRSAPEPRMPYQEAARELLRASILDAMRGLLTERDWAKITLADVAGRAGVSRQTLYNEFGSRAGLAQAYALRLADDL
VDHVRAAVTGNVGDARAAFREGLSGFFLDSAADPLVRSLLAGEAKPDLLRLITLDAGPLVEHATDRLAAVFEHSWVAATA
AQSQVVAHALVRIALSYIPNPPGPGRNAPAELAELLAPYVEGILAARGVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22382; Mature: 22251

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAGRSAPEPRMPYQEAARELLRASILDAMRGLLTERDWAKITLADVAGRAGVSRQTLY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
NEFGSRAGLAQAYALRLADDLVDHVRAAVTGNVGDARAAFREGLSGFFLDSAADPLVRSL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
LAGEAKPDLLRLITLDAGPLVEHATDRLAAVFEHSWVAATAAQSQVVAHALVRIALSYIP
HHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NPPGPGRNAPAELAELLAPYVEGILAARGVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PSAGRSAPEPRMPYQEAARELLRASILDAMRGLLTERDWAKITLADVAGRAGVSRQTLY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
NEFGSRAGLAQAYALRLADDLVDHVRAAVTGNVGDARAAFREGLSGFFLDSAADPLVRSL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
LAGEAKPDLLRLITLDAGPLVEHATDRLAAVFEHSWVAATAAQSQVVAHALVRIALSYIP
HHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NPPGPGRNAPAELAELLAPYVEGILAARGVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA