Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026581

Identifier: 54026581

GI number: 54026581

Start: 4795202

End: 4795846

Strand: Reverse

Name: 54026581

Synonym: nfa46080

Alternate gene names: NA

Gene position: 4795846-4795202 (Counterclockwise)

Preceding gene: 54026582

Following gene: 54026580

Centisome position: 79.65

GC content: 73.18

Gene sequence:

>645_bases
ATGCGAACCCTCCTCGATCTGGTCCTGCCGGTGGCGTGTGGCGGTTGCGGGCGTCCCGGCACGCCGTGGTGCGATGCGTG
CGCGACCGCGCTGGCCGGACCGCCGCTGCGGCTGCGTCCCCGCACCGATCCGGGCGTGCCGTGCTGGGCCGTGGCGCGAT
ATGCCGGGCCGGCGCGGCGGGCCGTCCTGGCGCTCAAGGAACGTGGTCGCACCGATCTCGCCGCGCCGCTGGGACATGCC
ATGGCGGGTGCCCTGCGCCGGTTGCGGACACCGGGCGTGCCGTTGCTGCTCGTGCCCGCGCCCAGCCGCCGGGCCGCGGC
ACGCAGGCGCGGTGGTGATCCGGTGGTGCGCACGGCGGCGGTTGCCGTTCGATCGCTGGATGGTTGCCAGCTCGTTCCTG
TGTTGCGGGTGTGGCGTGGTGTACAGGATTCGGTCGGCCTGTCGCCGGGTGAGCGCAGGCACAACCTGCACGGCCGGATA
TGGGTGTCGCGTGCGGCACCGGACGCGGCCCGATCGGCCGCGAATGCCGAGGTAGTGGTGGTCGACGACGTGCTGACCAC
GGGCGCGACGGCCGCGGAGTCGGTACGCGCGCTCGAGTGCTCAGGCCTGCCTGTGCGGGCCATTTTGGTGACGTGTGCTG
CTTGA

Upstream 100 bases:

>100_bases
CTGATTCCGCCGTGCGCGCGGCTGTGGACAACGGCCGAACTGTGCACAACGCGGTCGTGGCGCGGCGCGGGCAACCGCCG
TCCCGGGCACGCTGGTGCCC

Downstream 100 bases:

>100_bases
CTCGGGGAAATTTGCGTGAACAGTGGCGGACGGCTCGCGGTCGTACTACCGTCGCGGTCACACACCCGAACCGGGAGTTT
GGAGGTGGCGCCTCGGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MRTLLDLVLPVACGGCGRPGTPWCDACATALAGPPLRLRPRTDPGVPCWAVARYAGPARRAVLALKERGRTDLAAPLGHA
MAGALRRLRTPGVPLLLVPAPSRRAAARRRGGDPVVRTAAVAVRSLDGCQLVPVLRVWRGVQDSVGLSPGERRHNLHGRI
WVSRAAPDAARSAANAEVVVVDDVLTTGATAAESVRALECSGLPVRAILVTCAA

Sequences:

>Translated_214_residues
MRTLLDLVLPVACGGCGRPGTPWCDACATALAGPPLRLRPRTDPGVPCWAVARYAGPARRAVLALKERGRTDLAAPLGHA
MAGALRRLRTPGVPLLLVPAPSRRAAARRRGGDPVVRTAAVAVRSLDGCQLVPVLRVWRGVQDSVGLSPGERRHNLHGRI
WVSRAAPDAARSAANAEVVVVDDVLTTGATAAESVRALECSGLPVRAILVTCAA
>Mature_214_residues
MRTLLDLVLPVACGGCGRPGTPWCDACATALAGPPLRLRPRTDPGVPCWAVARYAGPARRAVLALKERGRTDLAAPLGHA
MAGALRRLRTPGVPLLLVPAPSRRAAARRRGGDPVVRTAAVAVRSLDGCQLVPVLRVWRGVQDSVGLSPGERRHNLHGRI
WVSRAAPDAARSAANAEVVVVDDVLTTGATAAESVRALECSGLPVRAILVTCAA

Specific function: Unknown

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22322; Mature: 22322

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLLDLVLPVACGGCGRPGTPWCDACATALAGPPLRLRPRTDPGVPCWAVARYAGPARR
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHCCHHHH
AVLALKERGRTDLAAPLGHAMAGALRRLRTPGVPLLLVPAPSRRAAARRRGGDPVVRTAA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHH
VAVRSLDGCQLVPVLRVWRGVQDSVGLSPGERRHNLHGRIWVSRAAPDAARSAANAEVVV
HHHHHCCCCEEHHHHHHHCCCHHHCCCCCCCHHCCCCCEEEEECCCCHHHHHCCCCEEEE
VDDVLTTGATAAESVRALECSGLPVRAILVTCAA
ECCHHHCCCHHHHHHHHHHCCCCCHHHHHEEECC
>Mature Secondary Structure
MRTLLDLVLPVACGGCGRPGTPWCDACATALAGPPLRLRPRTDPGVPCWAVARYAGPARR
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHCCHHHH
AVLALKERGRTDLAAPLGHAMAGALRRLRTPGVPLLLVPAPSRRAAARRRGGDPVVRTAA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHH
VAVRSLDGCQLVPVLRVWRGVQDSVGLSPGERRHNLHGRIWVSRAAPDAARSAANAEVVV
HHHHHCCCCEEHHHHHHHCCCHHHCCCCCCCHHCCCCCEEEEECCCCHHHHHCCCCEEEE
VDDVLTTGATAAESVRALECSGLPVRAILVTCAA
ECCHHHCCCHHHHHHHHHHCCCCCHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA