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The map label for this gene is 54026566

Identifier: 54026566

GI number: 54026566

Start: 4776113

End: 4776865

Strand: Reverse

Name: 54026566

Synonym: nfa45930

Alternate gene names: NA

Gene position: 4776865-4776113 (Counterclockwise)

Preceding gene: 54026568

Following gene: 54026560

Centisome position: 79.33

GC content: 67.86

Gene sequence:

>753_bases
GTGTTCGACAACGTGCGATTCGACAGGACGCTGGCGCTGCTCTGGGGTGAGGACGCGACGCGGGTCGGCCGCTCCGGCGC
GACGATCGCGGATTTCGTCGCGGCCGCGACGGCGATTCTGGATGAGCAAGGCGCGGAAGGGCTTTCGATGCGCGCTGTGG
CGAATCGGCTCGGCGTGCGGACGATGGCGACCTATACGTTCGGCAACAAGGACGACCTCGTCGCGCTCGTCGTCGACCGC
GCCTACCGCGACATGTACCCGTCGGACAAGCGGCCCGGACGGCTGGCGTGGCGGCCGGGGTTGACCGAGGTCGCGCACGC
GAATCGGGCCCTCGGTCTCGCGCACCCCTGGTTGCACGAACTCCAGGTCGTTCGTTCGCTCATGGGACCCCACGAGTTGC
GCAAGCGCGATCACGAACTCGCCCCGCTCGAGGCGACGCCGCTCAGCGACGTCGAAAAGGATCAAGTCCTCACGCAGCTG
TTGCTCCACGTGGCGGGCATGACCCGGATCGAGAACTCGCTACGGCGTGAACGCGACGCGACCGGCCTCGACGACGCGCA
GTGGTGGCAGGAGGTCATGCCGACGCTCGAGCCGATCGCCGAGGGTGACCCGTTCCCCTTGGCGCAGCGCATCGGACTCG
CCGCGCAATCCGCCCGCAACGGCCGGTTCTGGACCGACGAGGCATTCGAGTTCGGCCTCGAGCGCCTGCTCGACGGCATA
GAAGTCCTCATCGAAAAGCGCTCGGACAGCTGA

Upstream 100 bases:

>100_bases
GGCGGTAGGCGGGACTGTGGGTTGCTTCCATGCGAACTCCCAAACGATACAATGTATCGATACACCGTATCGTTTCTGCT
CGGCTACTGTCAACGCGGAG

Downstream 100 bases:

>100_bases
GTAGTCCGCGCTCGTGGTTCTCCGGCGAGCCCGCCAGATGGTCCGGGGAACCCTCGGTGGCCGAGTGAAGGAGCCTTGCC
GGTGCTGGATTCAGGCTCTG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Tetr Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Tetracyclin Repressor Domain-Containing Protein; Regulatory Protein TetR; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Regulatory Protein; GntR Family Transcriptional Regulator; TetR Family Transcriptional Repressor

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MFDNVRFDRTLALLWGEDATRVGRSGATIADFVAAATAILDEQGAEGLSMRAVANRLGVRTMATYTFGNKDDLVALVVDR
AYRDMYPSDKRPGRLAWRPGLTEVAHANRALGLAHPWLHELQVVRSLMGPHELRKRDHELAPLEATPLSDVEKDQVLTQL
LLHVAGMTRIENSLRRERDATGLDDAQWWQEVMPTLEPIAEGDPFPLAQRIGLAAQSARNGRFWTDEAFEFGLERLLDGI
EVLIEKRSDS

Sequences:

>Translated_250_residues
MFDNVRFDRTLALLWGEDATRVGRSGATIADFVAAATAILDEQGAEGLSMRAVANRLGVRTMATYTFGNKDDLVALVVDR
AYRDMYPSDKRPGRLAWRPGLTEVAHANRALGLAHPWLHELQVVRSLMGPHELRKRDHELAPLEATPLSDVEKDQVLTQL
LLHVAGMTRIENSLRRERDATGLDDAQWWQEVMPTLEPIAEGDPFPLAQRIGLAAQSARNGRFWTDEAFEFGLERLLDGI
EVLIEKRSDS
>Mature_250_residues
MFDNVRFDRTLALLWGEDATRVGRSGATIADFVAAATAILDEQGAEGLSMRAVANRLGVRTMATYTFGNKDDLVALVVDR
AYRDMYPSDKRPGRLAWRPGLTEVAHANRALGLAHPWLHELQVVRSLMGPHELRKRDHELAPLEATPLSDVEKDQVLTQL
LLHVAGMTRIENSLRRERDATGLDDAQWWQEVMPTLEPIAEGDPFPLAQRIGLAAQSARNGRFWTDEAFEFGLERLLDGI
EVLIEKRSDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27980; Mature: 27980

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDNVRFDRTLALLWGEDATRVGRSGATIADFVAAATAILDEQGAEGLSMRAVANRLGVR
CCCCCCHHHEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TMATYTFGNKDDLVALVVDRAYRDMYPSDKRPGRLAWRPGLTEVAHANRALGLAHPWLHE
HHEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHH
LQVVRSLMGPHELRKRDHELAPLEATPLSDVEKDQVLTQLLLHVAGMTRIENSLRRERDA
HHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TGLDDAQWWQEVMPTLEPIAEGDPFPLAQRIGLAAQSARNGRFWTDEAFEFGLERLLDGI
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
EVLIEKRSDS
HHHHHHCCCC
>Mature Secondary Structure
MFDNVRFDRTLALLWGEDATRVGRSGATIADFVAAATAILDEQGAEGLSMRAVANRLGVR
CCCCCCHHHEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TMATYTFGNKDDLVALVVDRAYRDMYPSDKRPGRLAWRPGLTEVAHANRALGLAHPWLHE
HHEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHH
LQVVRSLMGPHELRKRDHELAPLEATPLSDVEKDQVLTQLLLHVAGMTRIENSLRRERDA
HHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TGLDDAQWWQEVMPTLEPIAEGDPFPLAQRIGLAAQSARNGRFWTDEAFEFGLERLLDGI
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
EVLIEKRSDS
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA