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The map label for this gene is 54026505

Identifier: 54026505

GI number: 54026505

Start: 4704675

End: 4704980

Strand: Reverse

Name: 54026505

Synonym: nfa45320

Alternate gene names: NA

Gene position: 4704980-4704675 (Counterclockwise)

Preceding gene: 54026506

Following gene: 54026501

Centisome position: 78.14

GC content: 71.9

Gene sequence:

>306_bases
ATGACCTCCGCCACTGCTGACGTGACATGCCGAACCGTGGCCGGGAAGACCCCCGCCCGTGACATCGCGACGGTGCTGCC
GTGCCGTGTCGAGGACCCCGACCTGTGGTTCGCCGAGAGCCCGGTCCAGTTGGAGCAGGCCAAGGCGCTGTGCGCGTCCT
GTCCCATCCGCAAGGGCTGCCTGAGCGCGGCCATCGACCGGCGTGAGCCGTGGGGTGTCTGGGGCGGCGAGATCTTCGAC
CAGGGCGTCGTGATCGCGCGCAAGCGCCCCCGGGGCAGGCCCCGCAAGGTGGCGGTCCCGGCGTGA

Upstream 100 bases:

>100_bases
TTTCTGTTTCGGCCCTTCAGCCGGCAGGCACCGGTTTCGCCCGACGAGAACGACCGCTGCAAACGAGCTGAAGGAGAACG
ACGTGTTCACCGCAGAGCGA

Downstream 100 bases:

>100_bases
GGCCGGGCATGTCGCCCCTCCCTCCGTGCACTGCGGCCCGGCCGTCCACCCCGGACCACCCGGCCCAGCTACGCGAAAGC
AGACGAGCCGCTCACCCCTG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcription Factor WhiB-Like Protein; WhiB-Family Transcriptional Regulator; Transcriptional Regulator; WhiB Family Transcriptional Regulator; WhiB Family Regulatory Protein; Transcriptional Regulator WhiB; Whib-Like Transcriptional Regulator; Transcriptional Regulatory

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTSATADVTCRTVAGKTPARDIATVLPCRVEDPDLWFAESPVQLEQAKALCASCPIRKGCLSAAIDRREPWGVWGGEIFD
QGVVIARKRPRGRPRKVAVPA

Sequences:

>Translated_101_residues
MTSATADVTCRTVAGKTPARDIATVLPCRVEDPDLWFAESPVQLEQAKALCASCPIRKGCLSAAIDRREPWGVWGGEIFD
QGVVIARKRPRGRPRKVAVPA
>Mature_100_residues
TSATADVTCRTVAGKTPARDIATVLPCRVEDPDLWFAESPVQLEQAKALCASCPIRKGCLSAAIDRREPWGVWGGEIFDQ
GVVIARKRPRGRPRKVAVPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10944; Mature: 10813

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00354 HMGI_Y

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSATADVTCRTVAGKTPARDIATVLPCRVEDPDLWFAESPVQLEQAKALCASCPIRKGC
CCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCHHH
LSAAIDRREPWGVWGGEIFDQGVVIARKRPRGRPRKVAVPA
HHHHHCCCCCCCCCCCHHCCCCEEEEECCCCCCCCEEECCC
>Mature Secondary Structure 
TSATADVTCRTVAGKTPARDIATVLPCRVEDPDLWFAESPVQLEQAKALCASCPIRKGC
CCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCHHH
LSAAIDRREPWGVWGGEIFDQGVVIARKRPRGRPRKVAVPA
HHHHHCCCCCCCCCCCHHCCCCEEEEECCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA