Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is ccrB

Identifier: 54026428

GI number: 54026428

Start: 4623911

End: 4624333

Strand: Reverse

Name: ccrB

Synonym: nfa44550

Alternate gene names: 54026428

Gene position: 4624333-4623911 (Counterclockwise)

Preceding gene: 54026431

Following gene: 54026427

Centisome position: 76.8

GC content: 69.74

Gene sequence:

>423_bases
ATGAGCGCACCCGCGCGGGTACCGCCGCTCGATCCCGCGATACTGCTCGCGATCTCGCTCGGCGGCGGCCTCGGCGCCCT
GCTGCGCTACCTGATCTCGACCTGGTGGCCCACACCGCCGGGGCACGTGCCGTGGGCCACCTTCGTGGTGAACGTCACCG
GATGTTTCGCCATCGGCGTCCTGATGGTTCTGGTGACCGAGGCGTGGGTAACCCATCGACTGCTGCGCCCCTTCGCCGGC
GTCGGTTTGCTGGGTGGTTTCACCACCTTTTCGACCTACGGCCTCGAGATTCGTACACTGCTCGAATCCGGTGCGGTGCT
CGAAGCGCTCGGCTACCTCGCGGGCACGGTCCTGGCCGCGCTCGCCGGGGTGGTGCTCGGCACGGGTGCGGCGCGGTGGG
CAACGGGCGCGGCACGACGGTGA

Upstream 100 bases:

>100_bases
GGACGGTTGTGCCGAAGGTTTGCCGGACCGTTCCGGACGGCCCGGAAAGCGGCCGATACGATGACCCGGGCAGTGGGTCG
GCGCGGGAGGAGAACAGCAG

Downstream 100 bases:

>100_bases
CCCGGGCACACCGCCCGCGGTGGTTCGACGACGGCACGACGGAAGGGGGTCGGATGACCGGCCGACGGTCCGCGGAGGTG
CGCGGGTGAACATCGCGCTC

Product: camphor resistance protein CrcB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSAPARVPPLDPAILLAISLGGGLGALLRYLISTWWPTPPGHVPWATFVVNVTGCFAIGVLMVLVTEAWVTHRLLRPFAG
VGLLGGFTTFSTYGLEIRTLLESGAVLEALGYLAGTVLAALAGVVLGTGAARWATGAARR

Sequences:

>Translated_140_residues
MSAPARVPPLDPAILLAISLGGGLGALLRYLISTWWPTPPGHVPWATFVVNVTGCFAIGVLMVLVTEAWVTHRLLRPFAG
VGLLGGFTTFSTYGLEIRTLLESGAVLEALGYLAGTVLAALAGVVLGTGAARWATGAARR
>Mature_139_residues
SAPARVPPLDPAILLAISLGGGLGALLRYLISTWWPTPPGHVPWATFVVNVTGCFAIGVLMVLVTEAWVTHRLLRPFAGV
GLLGGFTTFSTYGLEIRTLLESGAVLEALGYLAGTVLAALAGVVLGTGAARWATGAARR

Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem

COG id: COG0239

COG function: function code D; Integral membrane protein possibly involved in chromosome condensation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CrcB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CRCB2_NOCFA (Q5YR85)

Other databases:

- EMBL:   AP006618
- RefSeq:   YP_120670.1
- GeneID:   3109390
- GenomeReviews:   AP006618_GR
- KEGG:   nfa:nfa44550
- NMPDR:   fig|247156.1.peg.4282
- HOGENOM:   HBG753179
- OMA:   LVRPFFG
- BioCyc:   NFAR247156:NFA44550-MONOMER
- HAMAP:   MF_00454
- InterPro:   IPR003691
- TIGRFAMs:   TIGR00494

Pfam domain/function: PF02537 CRCB

EC number: NA

Molecular weight: Translated: 14495; Mature: 14364

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1c7549e8)-; HASH(0x1ba5ad54)-; HASH(0x1bab0cfc)-; HASH(0x1c6adea0)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPARVPPLDPAILLAISLGGGLGALLRYLISTWWPTPPGHVPWATFVVNVTGCFAIGV
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
LMVLVTEAWVTHRLLRPFAGVGLLGGFTTFSTYGLEIRTLLESGAVLEALGYLAGTVLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LAGVVLGTGAARWATGAARR
HHHHHHCCCCHHHCCCCCCH
>Mature Secondary Structure 
SAPARVPPLDPAILLAISLGGGLGALLRYLISTWWPTPPGHVPWATFVVNVTGCFAIGV
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
LMVLVTEAWVTHRLLRPFAGVGLLGGFTTFSTYGLEIRTLLESGAVLEALGYLAGTVLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LAGVVLGTGAARWATGAARR
HHHHHHCCCCHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA