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The map label for this gene is yhiX [C]

Identifier: 54026319

GI number: 54026319

Start: 4509919

End: 4510974

Strand: Reverse

Name: yhiX [C]

Synonym: nfa43480

Alternate gene names: 54026319

Gene position: 4510974-4509919 (Counterclockwise)

Preceding gene: 54026323

Following gene: 54026316

Centisome position: 74.92

GC content: 72.16

Gene sequence:

>1056_bases
GTGAGCACCATCCACCCCGAGGTCCGTACGTGGGATTTCCCGCGCGGCGTCGCCGGGGTCGCGGTCATGGCCGAGTTCGC
CGCCCGGAACGGGGTACCGGTCGAGCGGGTGCTGGCCGGCACCGGACTCGACGAGCAGGCGCTGGCCGAACCCGACCGCC
AGATCCCCGCGCGCACCGAGCTGGCGGCGGTGCGCAACCTGCTGGCCGCCTTCGACGGTGAGCCCGGCCTCGGCCTGCGG
GTCGGTCGGCGGTACCGGGTGAGCACCTTCGGCATCTTCGGCTACGCGTGTGTCACCAGCCCGACCCTGCGCGAGGCCAT
CACGCTGGCGCTGCGCTACTACCGCCTCGGCTACGCCTTCTGCACCCCGATCGTGGAGTTCCGGCCCGGGGAGGTGGTGG
CCTGGATCAACCATGAACTGATCCCCGCCGACGTGCGGACCTTCCTGGTGGAACGCGACGTGGTCGCCATCCACCGGGTG
ATGAGCGACCTGCTCGGCGAGCGGCTGAACCTCGCCCGCGCCGAATTCGCCTGTCCCGAACCCGAACACGCCGCCCGGAT
GGCCTCGGTGTTCGGAGTGCGTCCGCGGTTCGGCAGCGAGCACACGCTGTTCGCGATCGACCCCGAGGTGCTGAATCGGC
CGCTGCCGCAAGCCAATCAGCCGACCTGGCAGATGTGCGTGGCGCAGTGCCACGAGCTGATCCGCCGCCGTACCGCCCGC
ACCGGCATCGCCGCCGAGGTGCGCGAGCGGCTGCTACCCGGCAGCGGGGCGATGGGGGTGGGCACGCCACCCACCATCGA
CGCGGTGGCCCGCGACCTGAACATGAGCGCGCGCACCCTGCGCCGCCGCCTGGACGAGGCGGGCACCAGCTACCGCGCCC
TGCTGGACGAGGTGCGCCGAGCGCTGGCCGAGGAGATGCTCACCGCCGCACCGCTGTCGGTCGACGACATCGCCATCCGG
CTCGGCTACGCCGAGGCCACCCCGTTCATCCACGCGTTCAAACGCTGGACCGGACTCACGCCGGCGGCGTACCGCCGCGC
GCATCACCGGCCTTGA

Upstream 100 bases:

>100_bases
GATCGACGGTGTGTTCATGAACACAACGCTAAGACCTGGACAAATGTCTCCGGCAAACACCTGAGGTCAACAAATCAATA
CTTTCGGCCATAATCGGGGG

Downstream 100 bases:

>100_bases
GCGGGGTGGGCAGTCCGCACAGCCGCGCGCTCACCTCGACCAGCCGCGCGCCCAGCTCGTCGTCGGTGGCGCGCCGGCCC
GGCTGCTTCGGTCTGTTGCG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSTIHPEVRTWDFPRGVAGVAVMAEFAARNGVPVERVLAGTGLDEQALAEPDRQIPARTELAAVRNLLAAFDGEPGLGLR
VGRRYRVSTFGIFGYACVTSPTLREAITLALRYYRLGYAFCTPIVEFRPGEVVAWINHELIPADVRTFLVERDVVAIHRV
MSDLLGERLNLARAEFACPEPEHAARMASVFGVRPRFGSEHTLFAIDPEVLNRPLPQANQPTWQMCVAQCHELIRRRTAR
TGIAAEVRERLLPGSGAMGVGTPPTIDAVARDLNMSARTLRRRLDEAGTSYRALLDEVRRALAEEMLTAAPLSVDDIAIR
LGYAEATPFIHAFKRWTGLTPAAYRRAHHRP

Sequences:

>Translated_351_residues
MSTIHPEVRTWDFPRGVAGVAVMAEFAARNGVPVERVLAGTGLDEQALAEPDRQIPARTELAAVRNLLAAFDGEPGLGLR
VGRRYRVSTFGIFGYACVTSPTLREAITLALRYYRLGYAFCTPIVEFRPGEVVAWINHELIPADVRTFLVERDVVAIHRV
MSDLLGERLNLARAEFACPEPEHAARMASVFGVRPRFGSEHTLFAIDPEVLNRPLPQANQPTWQMCVAQCHELIRRRTAR
TGIAAEVRERLLPGSGAMGVGTPPTIDAVARDLNMSARTLRRRLDEAGTSYRALLDEVRRALAEEMLTAAPLSVDDIAIR
LGYAEATPFIHAFKRWTGLTPAAYRRAHHRP
>Mature_350_residues
STIHPEVRTWDFPRGVAGVAVMAEFAARNGVPVERVLAGTGLDEQALAEPDRQIPARTELAAVRNLLAAFDGEPGLGLRV
GRRYRVSTFGIFGYACVTSPTLREAITLALRYYRLGYAFCTPIVEFRPGEVVAWINHELIPADVRTFLVERDVVAIHRVM
SDLLGERLNLARAEFACPEPEHAARMASVFGVRPRFGSEHTLFAIDPEVLNRPLPQANQPTWQMCVAQCHELIRRRTART
GIAAEVRERLLPGSGAMGVGTPPTIDAVARDLNMSARTLRRRLDEAGTSYRALLDEVRRALAEEMLTAAPLSVDDIAIRL
GYAEATPFIHAFKRWTGLTPAAYRRAHHRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38907; Mature: 38776

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIHPEVRTWDFPRGVAGVAVMAEFAARNGVPVERVLAGTGLDEQALAEPDRQIPARTE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHCCCCCCCCCHHH
LAAVRNLLAAFDGEPGLGLRVGRRYRVSTFGIFGYACVTSPTLREAITLALRYYRLGYAF
HHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
CTPIVEFRPGEVVAWINHELIPADVRTFLVERDVVAIHRVMSDLLGERLNLARAEFACPE
HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PEHAARMASVFGVRPRFGSEHTLFAIDPEVLNRPLPQANQPTWQMCVAQCHELIRRRTAR
HHHHHHHHHHHCCCCCCCCCCEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TGIAAEVRERLLPGSGAMGVGTPPTIDAVARDLNMSARTLRRRLDEAGTSYRALLDEVRR
CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHH
ALAEEMLTAAPLSVDDIAIRLGYAEATPFIHAFKRWTGLTPAAYRRAHHRP
HHHHHHHHHCCCCHHHHEEEECCHHHHHHHHHHHHHCCCCHHHHHHHCCCC
>Mature Secondary Structure 
STIHPEVRTWDFPRGVAGVAVMAEFAARNGVPVERVLAGTGLDEQALAEPDRQIPARTE
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHCCCCCCCCCHHH
LAAVRNLLAAFDGEPGLGLRVGRRYRVSTFGIFGYACVTSPTLREAITLALRYYRLGYAF
HHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
CTPIVEFRPGEVVAWINHELIPADVRTFLVERDVVAIHRVMSDLLGERLNLARAEFACPE
HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PEHAARMASVFGVRPRFGSEHTLFAIDPEVLNRPLPQANQPTWQMCVAQCHELIRRRTAR
HHHHHHHHHHHCCCCCCCCCCEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TGIAAEVRERLLPGSGAMGVGTPPTIDAVARDLNMSARTLRRRLDEAGTSYRALLDEVRR
CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHH
ALAEEMLTAAPLSVDDIAIRLGYAEATPFIHAFKRWTGLTPAAYRRAHHRP
HHHHHHHHHCCCCHHHHEEEECCHHHHHHHHHHHHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 12368430 [H]