| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is mntH [H]
Identifier: 54026316
GI number: 54026316
Start: 4507094
End: 4507705
Strand: Reverse
Name: mntH [H]
Synonym: nfa43450
Alternate gene names: 54026316
Gene position: 4507705-4507094 (Counterclockwise)
Preceding gene: 54026319
Following gene: 54026315
Centisome position: 74.86
GC content: 70.26
Gene sequence:
>612_bases ATGGTGGCACCGACGGCGTTGGCACTGGTGTGCACGTTGAAGAAGTCTTCGGCGCAGTCGAGTTCGGAACTGATCGCGCG ACAGGTGCTCGACCGGCTGGGCGGGCACGGGGTGCGGGGAGAGCTGGTGCGGGTGGTCGACTACGACGTCCGGCCCGGCG TCACCGCGGACGAAGGGGACGGCGACCAGTGGCCGCAGCTGCGGGAGCGGATCGCCGCGGCCGACATCCTGCTGGTGGCG ACGCCGACGTGGGTGGGGCACATGTCGTCGGTGGCGCAGCGGGTGCTGGAACGGCTCGACGCCGAACTGTCGACCACCGA CGACCAGGGCAGGCCCGCCATGGTCGGCAAGGTCGGACTGGCCGCGGTGGTCGGCAACGAGGACGGTGCGCACAAGATCG TCGCCGATCTCTTCCAGGGGCTGAACGACATCGGCTTCACCATCCCGGCGCAGGGCTGCACCTACTGGAACGGCAACGCC ATGCAGACCACCGACTACATCGACCTGGACGAGACGCCCGAGGCGGTGGCGAGCACCACCGCGGCGATGGCCCGCAACGC CGCCCACCTCGCCGGGCTGCTGCGCGAGCGGCCCTATCCCGCCTACGAGTAG
Upstream 100 bases:
>100_bases ACACCGGCGCGGGCCCGCCAACGACGAGCCCCGATTGCGTCACTCGGCACCGGGTAAGGCTGCCGGTGAACGGACTTTCC GCGAGGGCAGGAGGCGAGGC
Downstream 100 bases:
>100_bases CCCCCGGTTCACCGCGGCCGGACCGGGTATCCCGCGCCACAGAGGAGGTGTGTCATGCCGAAGGAATGGACCGACAAACA GGAACGGCAGTAGGAGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: BRAMP [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MVAPTALALVCTLKKSSAQSSSELIARQVLDRLGGHGVRGELVRVVDYDVRPGVTADEGDGDQWPQLRERIAAADILLVA TPTWVGHMSSVAQRVLERLDAELSTTDDQGRPAMVGKVGLAAVVGNEDGAHKIVADLFQGLNDIGFTIPAQGCTYWNGNA MQTTDYIDLDETPEAVASTTAAMARNAAHLAGLLRERPYPAYE
Sequences:
>Translated_203_residues MVAPTALALVCTLKKSSAQSSSELIARQVLDRLGGHGVRGELVRVVDYDVRPGVTADEGDGDQWPQLRERIAAADILLVA TPTWVGHMSSVAQRVLERLDAELSTTDDQGRPAMVGKVGLAAVVGNEDGAHKIVADLFQGLNDIGFTIPAQGCTYWNGNA MQTTDYIDLDETPEAVASTTAAMARNAAHLAGLLRERPYPAYE >Mature_203_residues MVAPTALALVCTLKKSSAQSSSELIARQVLDRLGGHGVRGELVRVVDYDVRPGVTADEGDGDQWPQLRERIAAADILLVA TPTWVGHMSSVAQRVLERLDAELSTTDDQGRPAMVGKVGLAAVVGNEDGAHKIVADLFQGLNDIGFTIPAQGCTYWNGNA MQTTDYIDLDETPEAVASTTAAMARNAAHLAGLLRERPYPAYE
Specific function: H(+)-stimulated, highly selective, manganese uptake system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the NRAMP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 - InterPro: IPR023056 - InterPro: IPR001046 [H]
Pfam domain/function: PF03358 FMN_red; PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 21656; Mature: 21656
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAPTALALVCTLKKSSAQSSSELIARQVLDRLGGHGVRGELVRVVDYDVRPGVTADEGD CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCCCCC GDQWPQLRERIAAADILLVATPTWVGHMSSVAQRVLERLDAELSTTDDQGRPAMVGKVGL CCCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHE AAVVGNEDGAHKIVADLFQGLNDIGFTIPAQGCTYWNGNAMQTTDYIDLDETPEAVASTT EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHH AAMARNAAHLAGLLRERPYPAYE HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVAPTALALVCTLKKSSAQSSSELIARQVLDRLGGHGVRGELVRVVDYDVRPGVTADEGD CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCCCCC GDQWPQLRERIAAADILLVATPTWVGHMSSVAQRVLERLDAELSTTDDQGRPAMVGKVGL CCCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHE AAVVGNEDGAHKIVADLFQGLNDIGFTIPAQGCTYWNGNAMQTTDYIDLDETPEAVASTT EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHH AAMARNAAHLAGLLRERPYPAYE HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972; 9632246 [H]