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The map label for this gene is yafE [C]

Identifier: 54026259

GI number: 54026259

Start: 4442043

End: 4443011

Strand: Reverse

Name: yafE [C]

Synonym: nfa42880

Alternate gene names: 54026259

Gene position: 4443011-4442043 (Counterclockwise)

Preceding gene: 54026260

Following gene: 54026258

Centisome position: 73.79

GC content: 69.87

Gene sequence:

>969_bases
ATGACGGTACGTCCCTCCGACCCCGCGCCGAACCCCCACGCCACCGAGGCGGAGGTGGAAGCGGCGTTCAAGGATACGAA
GCTGGCCCAGGTGCTCTACCACGACTGGGAGGCCGAGACCTACGACGACAAGTGGTCCATCTCCTACGACGAGCGCTGCA
TCGAGTACGCCCGCGGTCGGTTCGACGCCGCGGTCGGGCCGGCTCCGCTGCCCTACGAGCGCGCGCTCGAACTGGGTTGC
GGCACCGGCTTCTTCCTGCTGAACCTCATGCAGGGCGGGGTCGCCAAGTCCGGTTCGGTCACCGACCTGTCGCCGGGCAT
GGTGAAGGTGGCGCTGCGCAACGCCGAGAACCTCGGACTCGACGTGGACGGCCGTGTCGCCGACGCCGAGACCATCCCGT
ACGACGACGACACCTTCGACCTGGTGGTCGGGCACGCGGTGCTGCACCACATCCCCGATGTGGAGCAGGCGCTGCGCGAA
TGCCTGCGGGTGCTCAAGCCGGGCGGCCGCTTCGTCTTCGCCGGTGAGCCGACCACCGTCGGCAACTTCTACGCCCGCTG
GCTCGGCCGCATCACCTGGAAGGCCACCACCACCGTCACCAAGCTGCCCGCCCTGGCCGGGTGGCGGCGTCCGCAGGAGG
AGCTGGACGAGTCCTCCCGCGCGGCCGCGCTCGAGGCCGTCGTCGACCTGCACACCTTCGATCCCGCCGACCTCGAGGCC
ATGGCCCGGTCGGCGGGCGCCACCCAGGTGAAGGCGACCACCGAGGAGTTTGCGGCCGCGCTGTGGGGCTGGCCGGTGCG
CACCTTCGAAGCCGCGGTGCCCGAGGAGAAGCTGACCTGGCGCTACCGGATGGCGATGTACCGGGCGTGGCTCGGCCTGA
GCTGGGTGGACGAGAAGGTGATGCGCCACGTGGTGCCGCGCCAGTTCTTCTACAACGCCATGATCACGGGCGTGAAGCCC
GCGAAGTAG

Upstream 100 bases:

>100_bases
TGATAGGAACAGGTTCTAGTTCCGGCGGCTCTCGGTCACCTGTCCGAATGACCGGCCCGCGCACCGTACCGCCGGGTAGA
TCTGGGTAGGCTTGGCGACC

Downstream 100 bases:

>100_bases
GTGGGTTACGGCTTCGGCCGCGCCGACGTCGCGTTCCTCGCGAGTGCGGCCGGCCGCGCCGCGCTCGCGGAGGTCGCGGG
GCTGGAGTTGAGCGCCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTVRPSDPAPNPHATEAEVEAAFKDTKLAQVLYHDWEAETYDDKWSISYDERCIEYARGRFDAAVGPAPLPYERALELGC
GTGFFLLNLMQGGVAKSGSVTDLSPGMVKVALRNAENLGLDVDGRVADAETIPYDDDTFDLVVGHAVLHHIPDVEQALRE
CLRVLKPGGRFVFAGEPTTVGNFYARWLGRITWKATTTVTKLPALAGWRRPQEELDESSRAAALEAVVDLHTFDPADLEA
MARSAGATQVKATTEEFAAALWGWPVRTFEAAVPEEKLTWRYRMAMYRAWLGLSWVDEKVMRHVVPRQFFYNAMITGVKP
AK

Sequences:

>Translated_322_residues
MTVRPSDPAPNPHATEAEVEAAFKDTKLAQVLYHDWEAETYDDKWSISYDERCIEYARGRFDAAVGPAPLPYERALELGC
GTGFFLLNLMQGGVAKSGSVTDLSPGMVKVALRNAENLGLDVDGRVADAETIPYDDDTFDLVVGHAVLHHIPDVEQALRE
CLRVLKPGGRFVFAGEPTTVGNFYARWLGRITWKATTTVTKLPALAGWRRPQEELDESSRAAALEAVVDLHTFDPADLEA
MARSAGATQVKATTEEFAAALWGWPVRTFEAAVPEEKLTWRYRMAMYRAWLGLSWVDEKVMRHVVPRQFFYNAMITGVKP
AK
>Mature_321_residues
TVRPSDPAPNPHATEAEVEAAFKDTKLAQVLYHDWEAETYDDKWSISYDERCIEYARGRFDAAVGPAPLPYERALELGCG
TGFFLLNLMQGGVAKSGSVTDLSPGMVKVALRNAENLGLDVDGRVADAETIPYDDDTFDLVVGHAVLHHIPDVEQALREC
LRVLKPGGRFVFAGEPTTVGNFYARWLGRITWKATTTVTKLPALAGWRRPQEELDESSRAAALEAVVDLHTFDPADLEAM
ARSAGATQVKATTEEFAAALWGWPVRTFEAAVPEEKLTWRYRMAMYRAWLGLSWVDEKVMRHVVPRQFFYNAMITGVKPA
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08241 Methyltransf_11; PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 35820; Mature: 35689

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRPSDPAPNPHATEAEVEAAFKDTKLAQVLYHDWEAETYDDKWSISYDERCIEYARGR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
FDAAVGPAPLPYERALELGCGTGFFLLNLMQGGVAKSGSVTDLSPGMVKVALRNAENLGL
CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCC
DVDGRVADAETIPYDDDTFDLVVGHAVLHHIPDVEQALRECLRVLKPGGRFVFAGEPTTV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCCH
GNFYARWLGRITWKATTTVTKLPALAGWRRPQEELDESSRAAALEAVVDLHTFDPADLEA
HHHHHHHHHHHHEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MARSAGATQVKATTEEFAAALWGWPVRTFEAAVPEEKLTWRYRMAMYRAWLGLSWVDEKV
HHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHH
MRHVVPRQFFYNAMITGVKPAK
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TVRPSDPAPNPHATEAEVEAAFKDTKLAQVLYHDWEAETYDDKWSISYDERCIEYARGR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
FDAAVGPAPLPYERALELGCGTGFFLLNLMQGGVAKSGSVTDLSPGMVKVALRNAENLGL
CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCC
DVDGRVADAETIPYDDDTFDLVVGHAVLHHIPDVEQALRECLRVLKPGGRFVFAGEPTTV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCCH
GNFYARWLGRITWKATTTVTKLPALAGWRRPQEELDESSRAAALEAVVDLHTFDPADLEA
HHHHHHHHHHHHEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MARSAGATQVKATTEEFAAALWGWPVRTFEAAVPEEKLTWRYRMAMYRAWLGLSWVDEKV
HHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHH
MRHVVPRQFFYNAMITGVKPAK
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155856 [H]