| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is plsC [H]
Identifier: 54026245
GI number: 54026245
Start: 4426562
End: 4427464
Strand: Reverse
Name: plsC [H]
Synonym: nfa42740
Alternate gene names: 54026245
Gene position: 4427464-4426562 (Counterclockwise)
Preceding gene: 54026246
Following gene: 54026239
Centisome position: 73.53
GC content: 77.74
Gene sequence:
>903_bases ATGCCGTCGAGCCCGTGCGGGCCCGCCTGCATCGAGCGCACCGACGAGGTGAGCCCGGCCCGCGTGCTCGCCCGCACCGC GGGCATCGCCGGGCTGCTGGTCAGCTACCCGGTCGCCCACCTGGCCACGCCGCCCGCCCGCCGCGCCGCCGTGCAGCGGC GCTACGCCCGCGCCCTGCTCGGCTGTCTGGGGATGCGGCTGCGGGTGGTCGACAACCGCCGGCCCGATCCGGAGCACCCC GGCGGCCGCTACGCGTCGGCCGGCACCGGCGTGCTCGTCGTCGCCGGGCACGTCGGGTGGACCGATGTGGTCGCGCTGGC CGCGGTGCAGCCGCTGGGCTTCGTCGCGCGCGCCGACCTGATCGACTGGCCCGTCCTCGGTGGGCTCGCGCGGCTCATGC GCGTCGTGCCGATCGAGCGGGAACGACTGCGCGCGCTGCCGGCCACCGTGGCCCGGGTCGCCGAGCGGCTGGCGGCCGGG GAGCGGATCGCCGTGTTCCCGGAGGGCACCACCTGGTGCGGCCGCGCCTACGGCACCATGCGCCCGGCCTTCTTCCAGGC CGCGATCGACACCGGCACCTTCGTGCAGCCGGTGCGCCTGCGCTACCTGGACCGCCGCGGCGCGCAGTGCACCGTGCCGG GCTTCGTCGGCGAGGACTCCTTCCTGGCCTCGGCCAAGCGCGTGCTGCGCGCGGCGGGCACCACCGCCGAGATCGTGCTC GAGCCGCTCGAGTACCCGGGCCTGGACCGGCGCGACCTGGCGCGGCGGTGCGAGCGCGCGGTGCGCGGGGCGGACCTGTC CCGGCACGGGCTGGACGCCACGCAGTGGATCGAGGCGACCACCACCCGGGTCGCCGACCCGTCCCCGGCGCCCACATCCG ACCCCACCCGGCTCCCGCACTGA
Upstream 100 bases:
>100_bases GCTACCTGGAACGCTTGCAGGGCGCCGCGACGGCCTTCGACGGGGGACGGTGAGGACCGTGGTGTTCGACGCGCCGTTGG CGAAGGACGCACACAGCTGG
Downstream 100 bases:
>100_bases ACGGATTCGGCTCGGCATGGTGGGATCCAGAACCCACGGATCGGCGGTGTCACGGTCGTCTGATGGCTTCGGAATAGGCG GGGGTAGTCGAATTCGTGGC
Product: putative acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MPSSPCGPACIERTDEVSPARVLARTAGIAGLLVSYPVAHLATPPARRAAVQRRYARALLGCLGMRLRVVDNRRPDPEHP GGRYASAGTGVLVVAGHVGWTDVVALAAVQPLGFVARADLIDWPVLGGLARLMRVVPIERERLRALPATVARVAERLAAG ERIAVFPEGTTWCGRAYGTMRPAFFQAAIDTGTFVQPVRLRYLDRRGAQCTVPGFVGEDSFLASAKRVLRAAGTTAEIVL EPLEYPGLDRRDLARRCERAVRGADLSRHGLDATQWIEATTTRVADPSPAPTSDPTRLPH
Sequences:
>Translated_300_residues MPSSPCGPACIERTDEVSPARVLARTAGIAGLLVSYPVAHLATPPARRAAVQRRYARALLGCLGMRLRVVDNRRPDPEHP GGRYASAGTGVLVVAGHVGWTDVVALAAVQPLGFVARADLIDWPVLGGLARLMRVVPIERERLRALPATVARVAERLAAG ERIAVFPEGTTWCGRAYGTMRPAFFQAAIDTGTFVQPVRLRYLDRRGAQCTVPGFVGEDSFLASAKRVLRAAGTTAEIVL EPLEYPGLDRRDLARRCERAVRGADLSRHGLDATQWIEATTTRVADPSPAPTSDPTRLPH >Mature_299_residues PSSPCGPACIERTDEVSPARVLARTAGIAGLLVSYPVAHLATPPARRAAVQRRYARALLGCLGMRLRVVDNRRPDPEHPG GRYASAGTGVLVVAGHVGWTDVVALAAVQPLGFVARADLIDWPVLGGLARLMRVVPIERERLRALPATVARVAERLAAGE RIAVFPEGTTWCGRAYGTMRPAFFQAAIDTGTFVQPVRLRYLDRRGAQCTVPGFVGEDSFLASAKRVLRAAGTTAEIVLE PLEYPGLDRRDLARRCERAVRGADLSRHGLDATQWIEATTTRVADPSPAPTSDPTRLPH
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 32303; Mature: 32171
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSPCGPACIERTDEVSPARVLARTAGIAGLLVSYPVAHLATPPARRAAVQRRYARALL CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GCLGMRLRVVDNRRPDPEHPGGRYASAGTGVLVVAGHVGWTDVVALAAVQPLGFVARADL HHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH IDWPVLGGLARLMRVVPIERERLRALPATVARVAERLAAGERIAVFPEGTTWCGRAYGTM HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCC RPAFFQAAIDTGTFVQPVRLRYLDRRGAQCTVPGFVGEDSFLASAKRVLRAAGTTAEIVL CHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHEE EPLEYPGLDRRDLARRCERAVRGADLSRHGLDATQWIEATTTRVADPSPAPTSDPTRLPH CCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSSPCGPACIERTDEVSPARVLARTAGIAGLLVSYPVAHLATPPARRAAVQRRYARALL CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GCLGMRLRVVDNRRPDPEHPGGRYASAGTGVLVVAGHVGWTDVVALAAVQPLGFVARADL HHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH IDWPVLGGLARLMRVVPIERERLRALPATVARVAERLAAGERIAVFPEGTTWCGRAYGTM HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCC RPAFFQAAIDTGTFVQPVRLRYLDRRGAQCTVPGFVGEDSFLASAKRVLRAAGTTAEIVL CHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHEE EPLEYPGLDRRDLARRCERAVRGADLSRHGLDATQWIEATTTRVADPSPAPTSDPTRLPH CCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8748025 [H]